RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 RBM17Q96I25 401 aaKnown RBP18.96■□□□□ 0.63
CSNK2A1-209ENST00000609606 PLA2G12BQ9BX93 195 aa18.96■□□□□ 0.63
CSNK2A1-209ENST00000609606 UTYO14607 1347 aa18.96■□□□□ 0.63
CSNK2A1-209ENST00000609606 JARID2Q92833 1246 aaPredicted RBP18.95■□□□□ 0.62
CSNK2A1-209ENST00000609606 INTS3Q68E01 1043 aaKnown RBP18.94■□□□□ 0.62
CSNK2A1-209ENST00000609606 PRPF40BQ6NWY9 871 aaKnown RBP18.94■□□□□ 0.62
CSNK2A1-209ENST00000609606 C9orf78Q9NZ63 289 aaPredicted RBP18.94■□□□□ 0.62
CSNK2A1-209ENST00000609606 WWC3Q9ULE0 1092 aa18.94■□□□□ 0.62
CSNK2A1-209ENST00000609606 CTSWP56202 376 aa18.93■□□□□ 0.62
CSNK2A1-209ENST00000609606 CHD4Q14839 1912 aa18.93■□□□□ 0.62
CSNK2A1-209ENST00000609606 UTRNP46939 3433 aa18.93■□□□□ 0.62
CSNK2A1-209ENST00000609606 TAF1P21675 1872 aa18.92■□□□□ 0.62
CSNK2A1-209ENST00000609606 CCDC152Q4G0S7 254 aa18.92■□□□□ 0.62
CSNK2A1-209ENST00000609606 DDX46Q7L014 1031 aaKnown RBP18.92■□□□□ 0.62
CSNK2A1-209ENST00000609606 RTL9Q8NET4 1388 aa18.92■□□□□ 0.62
CSNK2A1-209ENST00000609606 SOGA3Q5TF21 947 aa18.91■□□□□ 0.62
CSNK2A1-209ENST00000609606 TTLL11Q8NHH1 800 aa18.91■□□□□ 0.62
CSNK2A1-209ENST00000609606 C7orf43Q8WVR3 580 aa18.91■□□□□ 0.62
CSNK2A1-209ENST00000609606 USP44Q9H0E7 712 aa18.91■□□□□ 0.62
CSNK2A1-209ENST00000609606 FER1L6Q2WGJ9 1857 aa18.9■□□□□ 0.62
CSNK2A1-209ENST00000609606 BBOX1O75936 387 aa18.9■□□□□ 0.62
CSNK2A1-209ENST00000609606 NBPF7P0C2Y1 421 aaPredicted RBP18.9■□□□□ 0.62
CSNK2A1-209ENST00000609606 GRAPQ13588 217 aa18.9■□□□□ 0.62
CSNK2A1-209ENST00000609606 GRAPLQ8TC17 118 aaPredicted RBP18.9■□□□□ 0.62
CSNK2A1-209ENST00000609606 CSF1RP07333 972 aa18.89■□□□□ 0.61
CSNK2A1-209ENST00000609606 TMC4Q7Z404 712 aa18.89■□□□□ 0.61
CSNK2A1-209ENST00000609606 C21orf2O43822 256 aa18.88■□□□□ 0.61
CSNK2A1-209ENST00000609606 MS4A1P11836 297 aa18.88■□□□□ 0.61
CSNK2A1-209ENST00000609606 FOXO4P98177 505 aa18.88■□□□□ 0.61
CSNK2A1-209ENST00000609606 CC2D2BQ6DHV5 1058 aa18.88■□□□□ 0.61
CSNK2A1-209ENST00000609606 DZIP1LQ8IYY4 767 aaKnown RBP18.88■□□□□ 0.61
CSNK2A1-209ENST00000609606 CLUAP1Q96AJ1 413 aa18.88■□□□□ 0.61
CSNK2A1-209ENST00000609606 TNNQ9UQP3 1299 aa18.88■□□□□ 0.61
CSNK2A1-209ENST00000609606 LRRC37AA6NMS7 1700 aa18.87■□□□□ 0.61
CSNK2A1-209ENST00000609606 PPEF1O14829 653 aaPredicted RBP18.87■□□□□ 0.61
CSNK2A1-209ENST00000609606 SBF1O95248 1867 aa18.87■□□□□ 0.61
CSNK2A1-209ENST00000609606 GRIPAP1Q4V328 841 aa18.87■□□□□ 0.61
CSNK2A1-209ENST00000609606 ARHGAP27Q6ZUM4 889 aa18.87■□□□□ 0.61
CSNK2A1-209ENST00000609606 FTSJ3Q8IY81 847 aaKnown RBP18.87■□□□□ 0.61
CSNK2A1-209ENST00000609606 HDAC5Q9UQL6 1122 aa18.87■□□□□ 0.61
CSNK2A1-209ENST00000609606 ATP6V0A2Q9Y487 856 aa18.87■□□□□ 0.61
CSNK2A1-209ENST00000609606 CCDC93Q567U6 631 aa18.86■□□□□ 0.61
CSNK2A1-209ENST00000609606 TMEM57Q8N5G2 664 aa18.86■□□□□ 0.61
CSNK2A1-209ENST00000609606 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.86■□□□□ 0.61
CSNK2A1-209ENST00000609606 KAZALD1Q96I82 304 aa18.86■□□□□ 0.61
CSNK2A1-209ENST00000609606 SUCLG2Q96I99 432 aa18.86■□□□□ 0.61
CSNK2A1-209ENST00000609606 CDC5LQ99459 802 aaKnown RBP18.86■□□□□ 0.61
CSNK2A1-209ENST00000609606 GREM2Q9H772 168 aa18.86■□□□□ 0.61
CSNK2A1-209ENST00000609606 SNED1Q8TER0 1413 aa18.85■□□□□ 0.61
CSNK2A1-209ENST00000609606 UBTFL1P0CB47 393 aaPredicted RBP18.85■□□□□ 0.61
CSNK2A1-209ENST00000609606 RPS8P62241 208 aaKnown RBP18.85■□□□□ 0.61
CSNK2A1-209ENST00000609606 RABL6Q3YEC7 729 aaPredicted RBP18.85■□□□□ 0.61
CSNK2A1-209ENST00000609606 EPHA10Q5JZY3 1008 aa18.85■□□□□ 0.61
CSNK2A1-209ENST00000609606 SP8Q8IXZ3 490 aa18.85■□□□□ 0.61
CSNK2A1-209ENST00000609606 RTKN2Q8IZC4 609 aa18.85■□□□□ 0.61
CSNK2A1-209ENST00000609606 CELF1Q92879 486 aaKnown RBP18.85■□□□□ 0.61
CSNK2A1-209ENST00000609606 SEC31BQ9NQW1 1179 aa18.85■□□□□ 0.61
CSNK2A1-209ENST00000609606 COL4A1P02462 1669 aa18.85■□□□□ 0.61
CSNK2A1-209ENST00000609606 LTBP3Q9NS15 1303 aa18.84■□□□□ 0.61
CSNK2A1-209ENST00000609606 GNAI3P08754 354 aa18.84■□□□□ 0.61
CSNK2A1-209ENST00000609606 RLBP1P12271 317 aa18.84■□□□□ 0.61
CSNK2A1-209ENST00000609606 LMBR1LQ6UX01 489 aa18.84■□□□□ 0.61
CSNK2A1-209ENST00000609606 CCDC85AQ96PX6 553 aaPredicted RBP18.84■□□□□ 0.61
CSNK2A1-209ENST00000609606 ZNF219Q9P2Y4 722 aaPredicted RBP18.84■□□□□ 0.61
CSNK2A1-209ENST00000609606 CCDC88AQ3V6T2 1871 aa18.84■□□□□ 0.61
CSNK2A1-209ENST00000609606 FAM161AQ3B820 660 aa18.83■□□□□ 0.6
CSNK2A1-209ENST00000609606 ANKRD18AQ8IVF6 992 aa18.83■□□□□ 0.6
CSNK2A1-209ENST00000609606 MEIS3Q99687 375 aa18.83■□□□□ 0.6
CSNK2A1-209ENST00000609606 TMX4Q9H1E5 349 aaPredicted RBP18.83■□□□□ 0.6
CSNK2A1-209ENST00000609606 BICC1Q9H694 974 aaKnown RBP18.83■□□□□ 0.6
CSNK2A1-209ENST00000609606 SPEF2Q9C093 1822 aa18.83■□□□□ 0.6
CSNK2A1-209ENST00000609606 NFKBIEO00221 500 aa18.82■□□□□ 0.6
CSNK2A1-209ENST00000609606 ITGA6P23229 1130 aa18.82■□□□□ 0.6
CSNK2A1-209ENST00000609606 PDE3AQ14432 1141 aa18.82■□□□□ 0.6
CSNK2A1-209ENST00000609606 ANKRD44Q8N8A2 993 aa18.82■□□□□ 0.6
CSNK2A1-209ENST00000609606 DICER1Q9UPY3 1922 aaKnown RBP18.82■□□□□ 0.6
CSNK2A1-209ENST00000609606 ANKRD18BA2A2Z9 1011 aa18.81■□□□□ 0.6
CSNK2A1-209ENST00000609606 IFIT5Q13325 482 aaKnown RBP18.81■□□□□ 0.6
CSNK2A1-209ENST00000609606 OLFM4Q6UX06 510 aa18.81■□□□□ 0.6
CSNK2A1-209ENST00000609606 PANK1Q8TE04 598 aa18.81■□□□□ 0.6
CSNK2A1-209ENST00000609606 PSMD1Q99460 953 aa18.81■□□□□ 0.6
CSNK2A1-209ENST00000609606 TAOK3Q9H2K8 898 aa18.81■□□□□ 0.6
CSNK2A1-209ENST00000609606 PLIN1O60240 522 aa18.8■□□□□ 0.6
CSNK2A1-209ENST00000609606 FKBP4Q02790 459 aaKnown RBP eCLIP18.8■□□□□ 0.6
CSNK2A1-209ENST00000609606 ITPRIPQ8IWB1 547 aa18.8■□□□□ 0.6
CSNK2A1-209ENST00000609606 BSDC1Q9NW68 430 aaPredicted RBP18.8■□□□□ 0.6
CSNK2A1-209ENST00000609606 LTBP1Q14766 1721 aa18.8■□□□□ 0.6
CSNK2A1-209ENST00000609606 IGHMBP2P38935 993 aaKnown RBP18.79■□□□□ 0.6
CSNK2A1-209ENST00000609606 RASSF7Q02833 373 aa18.79■□□□□ 0.6
CSNK2A1-209ENST00000609606 CCDC57Q2TAC2 916 aa18.79■□□□□ 0.6
CSNK2A1-209ENST00000609606 CHMP3Q9Y3E7 222 aa18.79■□□□□ 0.6
CSNK2A1-209ENST00000609606 LRRFIP2Q9Y608 721 aaKnown RBP18.79■□□□□ 0.6
CSNK2A1-209ENST00000609606 ZBTB7BO15156 539 aaPredicted RBP18.78■□□□□ 0.6
CSNK2A1-209ENST00000609606 LMNB1P20700 586 aa18.78■□□□□ 0.6
CSNK2A1-209ENST00000609606 MVPQ14764 893 aaKnown RBP18.78■□□□□ 0.6
CSNK2A1-209ENST00000609606 RTFDC1Q9BY42 306 aaPredicted RBP18.78■□□□□ 0.6
CSNK2A1-209ENST00000609606 GNAI2P04899 355 aa18.77■□□□□ 0.6
CSNK2A1-209ENST00000609606 SLC51AQ86UW1 340 aa18.77■□□□□ 0.6
CSNK2A1-209ENST00000609606 MPNDQ8N594 471 aa18.77■□□□□ 0.6
CSNK2A1-209ENST00000609606 MPHOSPH8Q99549 860 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms