RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 RAD17O75943 681 aa20.7■□□□□ 0.9
HDDC2-210ENST00000609574 HCLS1P14317 486 aaPredicted RBP20.7■□□□□ 0.9
HDDC2-210ENST00000609574 KIAA2012Q0VF49 1180 aa20.7■□□□□ 0.9
HDDC2-210ENST00000609574 COPS6Q7L5N1 327 aa20.7■□□□□ 0.9
HDDC2-210ENST00000609574 HHIPL1Q96JK4 782 aa20.7■□□□□ 0.9
HDDC2-210ENST00000609574 GLIS2Q9BZE0 524 aaPredicted RBP20.7■□□□□ 0.9
HDDC2-210ENST00000609574 NUP98P52948 1817 aa20.69■□□□□ 0.9
HDDC2-210ENST00000609574 GRAPQ13588 217 aa20.69■□□□□ 0.9
HDDC2-210ENST00000609574 FAM161AQ3B820 660 aa20.69■□□□□ 0.9
HDDC2-210ENST00000609574 NLRP10Q86W26 655 aa20.69■□□□□ 0.9
HDDC2-210ENST00000609574 GRAPLQ8TC17 118 aaPredicted RBP20.69■□□□□ 0.9
HDDC2-210ENST00000609574 CFAP44Q96MT7 982 aa20.69■□□□□ 0.9
HDDC2-210ENST00000609574 CNOT7Q9UIV1 285 aaKnown RBP20.69■□□□□ 0.9
HDDC2-210ENST00000609574 SH3TC1Q8TE82 1336 aa20.69■□□□□ 0.9
HDDC2-210ENST00000609574 COL4A5P29400 1685 aa20.68■□□□□ 0.9
HDDC2-210ENST00000609574 MLLT1Q03111 559 aaPredicted RBP20.68■□□□□ 0.9
HDDC2-210ENST00000609574 TCIRG1Q13488 830 aa20.68■□□□□ 0.9
HDDC2-210ENST00000609574 PDIA6Q15084 440 aa20.68■□□□□ 0.9
HDDC2-210ENST00000609574 XAGE3Q8WTP9 111 aa20.68■□□□□ 0.9
HDDC2-210ENST00000609574 NECTIN2Q92692 538 aa20.68■□□□□ 0.9
HDDC2-210ENST00000609574 PGAP2Q9UHJ9 254 aa20.68■□□□□ 0.9
HDDC2-210ENST00000609574 ANXA1P04083 346 aa20.67■□□□□ 0.9
HDDC2-210ENST00000609574 BRPF1P55201 1214 aaPredicted RBP20.67■□□□□ 0.9
HDDC2-210ENST00000609574 TSKSQ9UJT2 592 aa20.67■□□□□ 0.9
HDDC2-210ENST00000609574 SLC51AQ86UW1 340 aa20.66■□□□□ 0.9
HDDC2-210ENST00000609574 NOGQ13253 232 aa20.65■□□□□ 0.9
HDDC2-210ENST00000609574 WASHC4Q2M389 1173 aa20.65■□□□□ 0.9
HDDC2-210ENST00000609574 PROSER3Q2NL68 480 aa20.65■□□□□ 0.9
HDDC2-210ENST00000609574 KDM3BQ7LBC6 1761 aa20.64■□□□□ 0.9
HDDC2-210ENST00000609574 LTBP1Q14766 1721 aa20.64■□□□□ 0.9
HDDC2-210ENST00000609574 LRP10Q7Z4F1 713 aa20.64■□□□□ 0.89
HDDC2-210ENST00000609574 USP48Q86UV5 1035 aa20.64■□□□□ 0.89
HDDC2-210ENST00000609574 G3V3G9 751 aa20.63■□□□□ 0.89
HDDC2-210ENST00000609574 C6orf229H3BNL8 230 aa20.63■□□□□ 0.89
HDDC2-210ENST00000609574 HUNKP57058 714 aa20.63■□□□□ 0.89
HDDC2-210ENST00000609574 DCAF8Q5TAQ9 597 aa20.63■□□□□ 0.89
HDDC2-210ENST00000609574 MICALL2Q8IY33 904 aa20.63■□□□□ 0.89
HDDC2-210ENST00000609574 DPF2Q92785 391 aa20.63■□□□□ 0.89
HDDC2-210ENST00000609574 EYA3Q99504 573 aa20.63■□□□□ 0.89
HDDC2-210ENST00000609574 NSFL1CQ9UNZ2 370 aaKnown RBP20.63■□□□□ 0.89
HDDC2-210ENST00000609574 LAS1LQ9Y4W2 734 aaKnown RBP20.63■□□□□ 0.89
HDDC2-210ENST00000609574 TMPOP42166 694 aaKnown RBP20.62■□□□□ 0.89
HDDC2-210ENST00000609574 HIRAP54198 1017 aaPredicted RBP20.62■□□□□ 0.89
HDDC2-210ENST00000609574 C2orf69Q8N8R5 385 aa20.62■□□□□ 0.89
HDDC2-210ENST00000609574 TRPM4Q8TD43 1214 aa20.62■□□□□ 0.89
HDDC2-210ENST00000609574 DCPSQ96C86 337 aaKnown RBP20.62■□□□□ 0.89
HDDC2-210ENST00000609574 RIMBP2O15034 1052 aa20.6■□□□□ 0.89
HDDC2-210ENST00000609574 HSP90B1P14625 803 aaKnown RBP20.6■□□□□ 0.89
HDDC2-210ENST00000609574 RPS12P25398 132 aaKnown RBP20.6■□□□□ 0.89
HDDC2-210ENST00000609574 RGS19P49795 217 aa20.6■□□□□ 0.89
HDDC2-210ENST00000609574 RALBP1Q15311 655 aa20.6■□□□□ 0.89
HDDC2-210ENST00000609574 NEUROD2Q15784 382 aa20.6■□□□□ 0.89
HDDC2-210ENST00000609574 ANKRD13DQ6ZTN6 518 aa20.6■□□□□ 0.89
HDDC2-210ENST00000609574 KRT26Q7Z3Y9 468 aa20.6■□□□□ 0.89
HDDC2-210ENST00000609574 PLBD2Q8NHP8 589 aa20.6■□□□□ 0.89
HDDC2-210ENST00000609574 MCOLN1Q9GZU1 580 aa20.6■□□□□ 0.89
HDDC2-210ENST00000609574 TRPM7Q96QT4 1865 aa20.59■□□□□ 0.89
HDDC2-210ENST00000609574 DGKZQ13574 1117 aa20.59■□□□□ 0.89
HDDC2-210ENST00000609574 CCDC102AQ96A19 550 aa20.59■□□□□ 0.89
HDDC2-210ENST00000609574 ZBTB12Q9Y330 459 aaPredicted RBP20.59■□□□□ 0.89
HDDC2-210ENST00000609574 YDJCA8MPS7 323 aa20.58■□□□□ 0.89
HDDC2-210ENST00000609574 PSMD14O00487 310 aa20.58■□□□□ 0.89
HDDC2-210ENST00000609574 TBC1D10BQ4KMP7 808 aaPredicted RBP20.58■□□□□ 0.89
HDDC2-210ENST00000609574 RBM26Q5T8P6 1007 aaKnown RBP20.58■□□□□ 0.89
HDDC2-210ENST00000609574 HDGFL1Q5TGJ6 251 aa20.58■□□□□ 0.89
HDDC2-210ENST00000609574 SAMD7Q7Z3H4 446 aa20.58■□□□□ 0.89
HDDC2-210ENST00000609574 DBNDD1Q9H9R9 158 aa20.58■□□□□ 0.89
HDDC2-210ENST00000609574 DBF4Q9UBU7 674 aaPredicted RBP20.58■□□□□ 0.89
HDDC2-210ENST00000609574 DLG5Q8TDM6 1919 aa20.58■□□□□ 0.88
HDDC2-210ENST00000609574 SF3B3Q15393 1217 aaKnown RBP20.57■□□□□ 0.88
HDDC2-210ENST00000609574 RGMBQ6NW40 437 aa20.57■□□□□ 0.88
HDDC2-210ENST00000609574 FAM89AQ96GI7 184 aa20.57■□□□□ 0.88
HDDC2-210ENST00000609574 ZC3H12CQ9C0D7 883 aaKnown RBP20.57■□□□□ 0.88
HDDC2-210ENST00000609574 GBA2Q9HCG7 927 aaPredicted RBP20.57■□□□□ 0.88
HDDC2-210ENST00000609574 CHPF2Q9P2E5 772 aa20.57■□□□□ 0.88
HDDC2-210ENST00000609574 CHL1O00533 1208 aa20.56■□□□□ 0.88
HDDC2-210ENST00000609574 SULF1Q8IWU6 871 aa20.56■□□□□ 0.88
HDDC2-210ENST00000609574 HYPKQ9NX55 129 aa20.56■□□□□ 0.88
HDDC2-210ENST00000609574 ATP5J2-PTCD1G3V325 749 aa20.55■□□□□ 0.88
HDDC2-210ENST00000609574 ECE2O60344 883 aa20.55■□□□□ 0.88
HDDC2-210ENST00000609574 HOXB7P09629 217 aa20.55■□□□□ 0.88
HDDC2-210ENST00000609574 ZNF157P51786 506 aaPredicted RBP20.55■□□□□ 0.88
HDDC2-210ENST00000609574 RPS8P62241 208 aaKnown RBP20.55■□□□□ 0.88
HDDC2-210ENST00000609574 DOK7Q18PE1 504 aa20.55■□□□□ 0.88
HDDC2-210ENST00000609574 CELF1Q92879 486 aaKnown RBP20.55■□□□□ 0.88
HDDC2-210ENST00000609574 ZNF428Q96B54 188 aa20.55■□□□□ 0.88
HDDC2-210ENST00000609574 THSD7BQ9C0I4 1608 aa20.55■□□□□ 0.88
HDDC2-210ENST00000609574 SHTN1A0MZ66 631 aa20.54■□□□□ 0.88
HDDC2-210ENST00000609574 IRS4O14654 1257 aaPredicted RBP20.54■□□□□ 0.88
HDDC2-210ENST00000609574 GPSM2P81274 684 aa20.54■□□□□ 0.88
HDDC2-210ENST00000609574 WDR43Q15061 677 aaKnown RBP eCLIP20.54■□□□□ 0.88
HDDC2-210ENST00000609574 ANKIB1Q9P2G1 1089 aa20.54■□□□□ 0.88
HDDC2-210ENST00000609574 SLC34A2O95436 690 aa20.53■□□□□ 0.88
HDDC2-210ENST00000609574 RTL5Q5HYW3 569 aaPredicted RBP20.53■□□□□ 0.88
HDDC2-210ENST00000609574 ISCA1Q9BUE6 129 aa20.53■□□□□ 0.88
HDDC2-210ENST00000609574 SAGE1Q9NXZ1 904 aa20.53■□□□□ 0.88
HDDC2-210ENST00000609574 POLLQ9UGP5 575 aa20.53■□□□□ 0.88
HDDC2-210ENST00000609574 GOLGA2Q08379 1002 aa20.52■□□□□ 0.88
HDDC2-210ENST00000609574 RIC3Q7Z5B4 369 aa20.52■□□□□ 0.88
HDDC2-210ENST00000609574 CCDC146Q8IYE0 955 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms