RNA–Protein interactions for RNA: ENST00000602837.1

UBE2E3-211, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-211ENST00000602837 MAFBQ9Y5Q3 323 aaPredicted RBP9.73□□□□□ -0.85
UBE2E3-211ENST00000602837 SPATA31A5Q5VU36 1347 aa9.73□□□□□ -0.85
UBE2E3-211ENST00000602837 SPATA31A7Q8IWB4 1347 aa9.73□□□□□ -0.85
UBE2E3-211ENST00000602837 USP54Q70EL1 1684 aa9.73□□□□□ -0.85
UBE2E3-211ENST00000602837 COL18A1P39060 1754 aa9.73□□□□□ -0.85
UBE2E3-211ENST00000602837 RGPD5Q99666 1765 aa9.73□□□□□ -0.85
UBE2E3-211ENST00000602837 COL5A2P05997 1499 aaPredicted RBP9.72□□□□□ -0.85
UBE2E3-211ENST00000602837 LMO7Q8WWI1 1683 aa9.72□□□□□ -0.85
UBE2E3-211ENST00000602837 ATP9BO43861 1147 aa9.72□□□□□ -0.85
UBE2E3-211ENST00000602837 ERFEQ4G0M1 354 aa9.72□□□□□ -0.85
UBE2E3-211ENST00000602837 HSP90AB2PQ58FF8 381 aa9.72□□□□□ -0.85
UBE2E3-211ENST00000602837 BPHLQ86WA6 291 aaPredicted RBP9.72□□□□□ -0.85
UBE2E3-211ENST00000602837 SEPT12Q8IYM1 358 aa9.72□□□□□ -0.85
UBE2E3-211ENST00000602837 ANKLE1Q8NAG6 615 aa9.72□□□□□ -0.85
UBE2E3-211ENST00000602837 PBXIP1Q96AQ6 731 aa9.72□□□□□ -0.85
UBE2E3-211ENST00000602837 POLKQ9UBT6 870 aa9.72□□□□□ -0.85
UBE2E3-211ENST00000602837 NRAPQ86VF7 1730 aa9.72□□□□□ -0.85
UBE2E3-211ENST00000602837 SPATA31A1Q5TZJ5 1347 aa9.72□□□□□ -0.85
UBE2E3-211ENST00000602837 LTN1O94822 1766 aa9.72□□□□□ -0.85
UBE2E3-211ENST00000602837 NSD2O96028 1365 aa9.72□□□□□ -0.85
UBE2E3-211ENST00000602837 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.71□□□□□ -0.85
UBE2E3-211ENST00000602837 ZBTB24O43167 697 aaPredicted RBP9.71□□□□□ -0.86
UBE2E3-211ENST00000602837 SKIP12755 728 aa9.71□□□□□ -0.86
UBE2E3-211ENST00000602837 GGCXP38435 758 aa9.71□□□□□ -0.86
UBE2E3-211ENST00000602837 TRIM32Q13049 653 aa9.71□□□□□ -0.86
UBE2E3-211ENST00000602837 DZIP3Q86Y13 1208 aaKnown RBP9.71□□□□□ -0.86
UBE2E3-211ENST00000602837 TCP11L2Q8N4U5 519 aa9.71□□□□□ -0.86
UBE2E3-211ENST00000602837 RETREG2Q8NC44 543 aa9.71□□□□□ -0.86
UBE2E3-211ENST00000602837 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.71□□□□□ -0.86
UBE2E3-211ENST00000602837 WDR17Q8IZU2 1322 aa9.71□□□□□ -0.86
UBE2E3-211ENST00000602837 GLI3P10071 1580 aa9.71□□□□□ -0.86
UBE2E3-211ENST00000602837 SKOR1P84550 965 aa9.7□□□□□ -0.86
UBE2E3-211ENST00000602837 TSGA10IPQ3SY00 556 aa9.7□□□□□ -0.86
UBE2E3-211ENST00000602837 DEPDC4Q8N2C3 294 aa9.7□□□□□ -0.86
UBE2E3-211ENST00000602837 CARD10Q9BWT7 1032 aa9.7□□□□□ -0.86
UBE2E3-211ENST00000602837 RGS12O14924 1447 aa9.7□□□□□ -0.86
UBE2E3-211ENST00000602837 CRB1P82279 1406 aa9.7□□□□□ -0.86
UBE2E3-211ENST00000602837 MAP2P11137 1827 aaKnown RBP9.69□□□□□ -0.86
UBE2E3-211ENST00000602837 FLT4P35916 1363 aa9.69□□□□□ -0.86
UBE2E3-211ENST00000602837 SLFNL1Q499Z3 407 aa9.69□□□□□ -0.86
UBE2E3-211ENST00000602837 PHTF2Q8N3S3 785 aa9.69□□□□□ -0.86
UBE2E3-211ENST00000602837 USHBP1Q8N6Y0 703 aa9.69□□□□□ -0.86
UBE2E3-211ENST00000602837 ANKRD26Q9UPS8 1709 aa9.68□□□□□ -0.86
UBE2E3-211ENST00000602837 BLMP54132 1417 aaPredicted RBP9.68□□□□□ -0.86
UBE2E3-211ENST00000602837 RTL1A6NKG5 1358 aa9.68□□□□□ -0.86
UBE2E3-211ENST00000602837 GIGYF1O75420 1035 aaPredicted RBP9.68□□□□□ -0.86
UBE2E3-211ENST00000602837 MTHFSP49914 203 aa9.68□□□□□ -0.86
UBE2E3-211ENST00000602837 RNF135Q8IUD6 432 aa9.68□□□□□ -0.86
UBE2E3-211ENST00000602837 THRAP3Q9Y2W1 955 aaKnown RBP9.68□□□□□ -0.86
UBE2E3-211ENST00000602837 PEAK1Q9H792 1746 aa9.68□□□□□ -0.86
UBE2E3-211ENST00000602837 INSRP06213 1382 aa9.67□□□□□ -0.86
UBE2E3-211ENST00000602837 NPC1L1Q9UHC9 1359 aa9.67□□□□□ -0.86
UBE2E3-211ENST00000602837 USP17L3A6NCW0 530 aa9.67□□□□□ -0.86
UBE2E3-211ENST00000602837 USP17L4A6NCW7 530 aa9.67□□□□□ -0.86
UBE2E3-211ENST00000602837 USP17L5A8MUK1 530 aa9.67□□□□□ -0.86
UBE2E3-211ENST00000602837 MCCD1P59942 119 aaPredicted RBP9.67□□□□□ -0.86
UBE2E3-211ENST00000602837 FAM182BQ5T319 152 aa9.67□□□□□ -0.86
UBE2E3-211ENST00000602837 NBPF6Q5VWK0 638 aa9.67□□□□□ -0.86
UBE2E3-211ENST00000602837 USP17L2Q6R6M4 530 aa9.67□□□□□ -0.86
UBE2E3-211ENST00000602837 USP17L1Q7RTZ2 530 aa9.67□□□□□ -0.86
UBE2E3-211ENST00000602837 KRT27Q7Z3Y8 459 aa9.67□□□□□ -0.86
UBE2E3-211ENST00000602837 NFATC2IPQ8NCF5 419 aa9.67□□□□□ -0.86
UBE2E3-211ENST00000602837 EMID1Q96A84 441 aaPredicted RBP9.67□□□□□ -0.86
UBE2E3-211ENST00000602837 NBPF4Q96M43 638 aa9.67□□□□□ -0.86
UBE2E3-211ENST00000602837 C1QTNF2Q9BXJ5 285 aa9.67□□□□□ -0.86
UBE2E3-211ENST00000602837 ABCC6O95255 1503 aa9.66□□□□□ -0.86
UBE2E3-211ENST00000602837 CDK12Q9NYV4 1490 aaPredicted RBP9.66□□□□□ -0.86
UBE2E3-211ENST00000602837 SMG6Q86US8 1419 aaKnown RBP9.66□□□□□ -0.86
UBE2E3-211ENST00000602837 PDIA4P13667 645 aaKnown RBP9.66□□□□□ -0.86
UBE2E3-211ENST00000602837 PDE3BQ13370 1112 aa9.66□□□□□ -0.86
UBE2E3-211ENST00000602837 EIF4A2Q14240 407 aaKnown RBP9.66□□□□□ -0.86
UBE2E3-211ENST00000602837 LIAT1Q6ZQX7 453 aa9.66□□□□□ -0.86
UBE2E3-211ENST00000602837 KIF24Q5T7B8 1368 aa9.65□□□□□ -0.86
UBE2E3-211ENST00000602837 EXOC5O00471 708 aa9.65□□□□□ -0.86
UBE2E3-211ENST00000602837 IL2RBP14784 551 aa9.65□□□□□ -0.86
UBE2E3-211ENST00000602837 PPP2R1AP30153 589 aa9.65□□□□□ -0.86
UBE2E3-211ENST00000602837 DDB1Q16531 1140 aa9.65□□□□□ -0.86
UBE2E3-211ENST00000602837 PLPP7Q8NBV4 271 aa9.65□□□□□ -0.86
UBE2E3-211ENST00000602837 ZNF592Q92610 1267 aa9.65□□□□□ -0.86
UBE2E3-211ENST00000602837 SLC10A4Q96EP9 437 aa9.65□□□□□ -0.86
UBE2E3-211ENST00000602837 CARNS1A5YM72 827 aa9.64□□□□□ -0.87
UBE2E3-211ENST00000602837 NCOA4Q13772 614 aa9.64□□□□□ -0.87
UBE2E3-211ENST00000602837 CCDC85AQ96PX6 553 aaPredicted RBP9.64□□□□□ -0.87
UBE2E3-211ENST00000602837 CDCA7Q9BWT1 371 aaPredicted RBP9.64□□□□□ -0.87
UBE2E3-211ENST00000602837 RGPD2P0DJD1 1756 aa9.64□□□□□ -0.87
UBE2E3-211ENST00000602837 BRWD3Q6RI45 1802 aa9.63□□□□□ -0.87
UBE2E3-211ENST00000602837 DIAPH1O60610 1272 aaKnown RBP9.63□□□□□ -0.87
UBE2E3-211ENST00000602837 TATP17735 454 aaPredicted RBP9.63□□□□□ -0.87
UBE2E3-211ENST00000602837 RPIAP49247 311 aa9.63□□□□□ -0.87
UBE2E3-211ENST00000602837 DDX54Q8TDD1 881 aaKnown RBP9.63□□□□□ -0.87
UBE2E3-211ENST00000602837 RAPGEF4Q8WZA2 1011 aa9.63□□□□□ -0.87
UBE2E3-211ENST00000602837 CFAP53Q96M91 514 aa9.63□□□□□ -0.87
UBE2E3-211ENST00000602837 VRTNQ9H8Y1 702 aa9.63□□□□□ -0.87
UBE2E3-211ENST00000602837 IL13P35225 146 aa9.62□□□□□ -0.87
UBE2E3-211ENST00000602837 WNT7BP56706 349 aa9.62□□□□□ -0.87
UBE2E3-211ENST00000602837 RALBP1Q15311 655 aa9.62□□□□□ -0.87
UBE2E3-211ENST00000602837 TRAF7Q6Q0C0 670 aa9.62□□□□□ -0.87
UBE2E3-211ENST00000602837 PLEKHM2Q8IWE5 1019 aa9.62□□□□□ -0.87
UBE2E3-211ENST00000602837 TRMT44Q8IYL2 757 aaKnown RBP9.62□□□□□ -0.87
UBE2E3-211ENST00000602837 U2SURPO15042 1029 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms