RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 SENP3Q9H4L4 574 aaPredicted RBP11.66□□□□□ -0.54
HCG18-242ENST00000602319 RFX7Q2KHR2 1363 aa11.66□□□□□ -0.54
HCG18-242ENST00000602319 ROBO2Q9HCK4 1378 aa11.66□□□□□ -0.54
HCG18-242ENST00000602319 HIP1O00291 1037 aa11.65□□□□□ -0.54
HCG18-242ENST00000602319 USPL1Q5W0Q7 1092 aa11.65□□□□□ -0.54
HCG18-242ENST00000602319 LARP1Q6PKG0 1096 aaKnown RBP11.65□□□□□ -0.54
HCG18-242ENST00000602319 NBPF11Q86T75 865 aa11.65□□□□□ -0.54
HCG18-242ENST00000602319 DRC7Q8IY82 874 aa11.65□□□□□ -0.54
HCG18-242ENST00000602319 PSDA5PKW4 1024 aaPredicted RBP11.65□□□□□ -0.54
HCG18-242ENST00000602319 COL9A3Q14050 684 aaPredicted RBP11.65□□□□□ -0.54
HCG18-242ENST00000602319 BPIFA3Q9BQP9 254 aa11.65□□□□□ -0.54
HCG18-242ENST00000602319 ECHDC1Q9NTX5 307 aa11.65□□□□□ -0.54
HCG18-242ENST00000602319 ADAMTS13Q76LX8 1427 aa11.65□□□□□ -0.54
HCG18-242ENST00000602319 CCDC69A6NI79 296 aa11.65□□□□□ -0.55
HCG18-242ENST00000602319 GSDMDP57764 484 aa11.65□□□□□ -0.55
HCG18-242ENST00000602319 SNW1Q13573 536 aaKnown RBP11.65□□□□□ -0.55
HCG18-242ENST00000602319 ENGASEQ8NFI3 743 aa11.65□□□□□ -0.55
HCG18-242ENST00000602319 ZSCAN16Q9H4T2 348 aaPredicted RBP11.65□□□□□ -0.55
HCG18-242ENST00000602319 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.65□□□□□ -0.55
HCG18-242ENST00000602319 ACEP12821 1306 aa11.65□□□□□ -0.55
HCG18-242ENST00000602319 CAMTA1Q9Y6Y1 1673 aa11.64□□□□□ -0.55
HCG18-242ENST00000602319 SKILP12757 684 aa11.64□□□□□ -0.55
HCG18-242ENST00000602319 ARID5BQ14865 1188 aa11.64□□□□□ -0.55
HCG18-242ENST00000602319 FAM173BQ6P4H8 233 aa11.64□□□□□ -0.55
HCG18-242ENST00000602319 SMARCC2Q8TAQ2 1214 aa11.64□□□□□ -0.55
HCG18-242ENST00000602319 IPO4Q8TEX9 1081 aaKnown RBP11.64□□□□□ -0.55
HCG18-242ENST00000602319 GTF3C6Q969F1 213 aa11.64□□□□□ -0.55
HCG18-242ENST00000602319 HMG20BQ9P0W2 317 aa11.64□□□□□ -0.55
HCG18-242ENST00000602319 GNAT3A8MTJ3 354 aa11.64□□□□□ -0.55
HCG18-242ENST00000602319 SRGAP3O43295 1099 aa11.64□□□□□ -0.55
HCG18-242ENST00000602319 ZKSCAN1P17029 563 aaPredicted RBP11.64□□□□□ -0.55
HCG18-242ENST00000602319 CAPN2P17655 700 aa11.64□□□□□ -0.55
HCG18-242ENST00000602319 BMS1Q14692 1282 aaKnown RBP11.64□□□□□ -0.55
HCG18-242ENST00000602319 EYA1Q99502 592 aa11.63□□□□□ -0.55
HCG18-242ENST00000602319 RCOR1Q9UKL0 485 aa11.63□□□□□ -0.55
HCG18-242ENST00000602319 DHX8Q14562 1220 aaKnown RBP11.63□□□□□ -0.55
HCG18-242ENST00000602319 MUM1L1Q5H9M0 696 aa11.63□□□□□ -0.55
HCG18-242ENST00000602319 TSPYL1Q9H0U9 437 aa11.63□□□□□ -0.55
HCG18-242ENST00000602319 ATP8B1O43520 1251 aa11.63□□□□□ -0.55
HCG18-242ENST00000602319 NBPF7P0C2Y1 421 aaPredicted RBP11.63□□□□□ -0.55
HCG18-242ENST00000602319 PLA2G4AP47712 749 aa11.63□□□□□ -0.55
HCG18-242ENST00000602319 E4F1Q66K89 784 aaPredicted RBP11.63□□□□□ -0.55
HCG18-242ENST00000602319 ATL3Q6DD88 541 aa11.63□□□□□ -0.55
HCG18-242ENST00000602319 DNAJC2Q99543 621 aaKnown RBP11.63□□□□□ -0.55
HCG18-242ENST00000602319 OVOS2A0A0G2JMS6 1433 aa11.62□□□□□ -0.55
HCG18-242ENST00000602319 UTYO14607 1347 aa11.62□□□□□ -0.55
HCG18-242ENST00000602319 NEDD4P46934 1319 aa11.62□□□□□ -0.55
HCG18-242ENST00000602319 FERMT3Q86UX7 667 aa11.62□□□□□ -0.55
HCG18-242ENST00000602319 ERC1Q8IUD2 1116 aa11.62□□□□□ -0.55
HCG18-242ENST00000602319 IL17REQ8NFR9 667 aa11.62□□□□□ -0.55
HCG18-242ENST00000602319 PHLPP2Q6ZVD8 1323 aa11.62□□□□□ -0.55
HCG18-242ENST00000602319 PPP1R13BQ96KQ4 1090 aa11.62□□□□□ -0.55
HCG18-242ENST00000602319 GOLPH3LQ9H4A5 285 aa11.62□□□□□ -0.55
HCG18-242ENST00000602319 PHAXQ9H814 394 aaKnown RBP11.62□□□□□ -0.55
HCG18-242ENST00000602319 KCNJ4P48050 445 aa11.62□□□□□ -0.55
HCG18-242ENST00000602319 CLCN6P51797 869 aa11.62□□□□□ -0.55
HCG18-242ENST00000602319 NMIQ13287 307 aaPredicted RBP11.62□□□□□ -0.55
HCG18-242ENST00000602319 TAF7Q15545 349 aaPredicted RBP11.62□□□□□ -0.55
HCG18-242ENST00000602319 TXNDC2Q86VQ3 553 aa11.62□□□□□ -0.55
HCG18-242ENST00000602319 ST7Q9NRC1 585 aa11.62□□□□□ -0.55
HCG18-242ENST00000602319 ZBTB22O15209 634 aa11.61□□□□□ -0.55
HCG18-242ENST00000602319 NAA16Q6N069 864 aaPredicted RBP11.61□□□□□ -0.55
HCG18-242ENST00000602319 CCDC150Q8NCX0 1101 aa11.61□□□□□ -0.55
HCG18-242ENST00000602319 LLPHQ9BRT6 129 aaKnown RBP11.61□□□□□ -0.55
HCG18-242ENST00000602319 CFAP45Q9UL16 551 aa11.61□□□□□ -0.55
HCG18-242ENST00000602319 COL15A1P39059 1388 aa11.61□□□□□ -0.55
HCG18-242ENST00000602319 SALL1Q9NSC2 1324 aa11.61□□□□□ -0.55
HCG18-242ENST00000602319 PNMA6AP0CW24 399 aaPredicted RBP11.61□□□□□ -0.55
HCG18-242ENST00000602319 TPRNQ4KMQ1 711 aa11.61□□□□□ -0.55
HCG18-242ENST00000602319 BLOC1S2Q6QNY1 142 aa11.61□□□□□ -0.55
HCG18-242ENST00000602319 GPATCH3Q96I76 525 aa11.61□□□□□ -0.55
HCG18-242ENST00000602319 NOL10Q9BSC4 688 aaKnown RBP11.61□□□□□ -0.55
HCG18-242ENST00000602319 GOLGA6L19H0YKK7 550 aa11.6□□□□□ -0.55
HCG18-242ENST00000602319 ANO10Q9NW15 660 aa11.6□□□□□ -0.55
HCG18-242ENST00000602319 TFIP11Q9UBB9 837 aaKnown RBP11.6□□□□□ -0.55
HCG18-242ENST00000602319 C4AP0C0L4 1744 aa11.6□□□□□ -0.55
HCG18-242ENST00000602319 C4BP0C0L5 1744 aa11.6□□□□□ -0.55
HCG18-242ENST00000602319 GOLGA6L4A6NEF3 574 aa11.6□□□□□ -0.55
HCG18-242ENST00000602319 ALDH1L1O75891 902 aa11.6□□□□□ -0.55
HCG18-242ENST00000602319 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.6□□□□□ -0.55
HCG18-242ENST00000602319 TAF6LQ9Y6J9 622 aa11.6□□□□□ -0.55
HCG18-242ENST00000602319 CLASRPQ8N2M8 674 aaKnown RBP11.6□□□□□ -0.55
HCG18-242ENST00000602319 LRRN4CLQ8ND94 238 aa11.6□□□□□ -0.55
HCG18-242ENST00000602319 BICD2Q8TD16 824 aa11.6□□□□□ -0.55
HCG18-242ENST00000602319 DNAAF4Q8WXU2 420 aa11.6□□□□□ -0.55
HCG18-242ENST00000602319 FAM227BQ96M60 508 aa11.6□□□□□ -0.55
HCG18-242ENST00000602319 ECM29Q5VYK3 1845 aa11.59□□□□□ -0.55
HCG18-242ENST00000602319 A0A0D9SFI3 127 aa11.59□□□□□ -0.55
HCG18-242ENST00000602319 DTNBO60941 627 aa11.59□□□□□ -0.55
HCG18-242ENST00000602319 ARMCX5Q6P1M9 558 aa11.59□□□□□ -0.55
HCG18-242ENST00000602319 ORC3Q9UBD5 711 aaPredicted RBP11.59□□□□□ -0.55
HCG18-242ENST00000602319 CHMP3Q9Y3E7 222 aa11.59□□□□□ -0.55
HCG18-242ENST00000602319 USP16Q9Y5T5 823 aa11.59□□□□□ -0.55
HCG18-242ENST00000602319 HEG1Q9ULI3 1381 aa11.59□□□□□ -0.55
HCG18-242ENST00000602319 RGPD2P0DJD1 1756 aa11.59□□□□□ -0.55
HCG18-242ENST00000602319 SPEF2Q9C093 1822 aa11.59□□□□□ -0.55
HCG18-242ENST00000602319 NPM1P06748 294 aaKnown RBP eCLIP11.59□□□□□ -0.55
HCG18-242ENST00000602319 HDGFL1Q5TGJ6 251 aa11.59□□□□□ -0.55
HCG18-242ENST00000602319 ZNF592Q92610 1267 aa11.59□□□□□ -0.55
HCG18-242ENST00000602319 FAM160A1Q05DH4 1040 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms