RNA–Protein interactions for RNA: ENST00000602171.5

FARP1-239, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-239ENST00000602171 JCADQ9P266 1359 aa10.11□□□□□ -0.79
FARP1-239ENST00000602171 NHSL1Q5SYE7 1610 aa10.11□□□□□ -0.79
FARP1-239ENST00000602171 PXDNQ92626 1479 aa10.1□□□□□ -0.79
FARP1-239ENST00000602171 ERVH48-1M5A8F1 160 aa10.1□□□□□ -0.79
FARP1-239ENST00000602171 NLRP13Q86W25 1043 aa10.1□□□□□ -0.79
FARP1-239ENST00000602171 KNSTRNQ9Y448 316 aa10.1□□□□□ -0.79
FARP1-239ENST00000602171 RGPD8O14715 1765 aaPredicted RBP10.1□□□□□ -0.79
FARP1-239ENST00000602171 PHLPP1O60346 1717 aa10.1□□□□□ -0.79
FARP1-239ENST00000602171 CD163L1Q9NR16 1453 aa10.1□□□□□ -0.79
FARP1-239ENST00000602171 CGNL1Q0VF96 1302 aa10.09□□□□□ -0.79
FARP1-239ENST00000602171 TTC21BQ7Z4L5 1316 aa10.09□□□□□ -0.79
FARP1-239ENST00000602171 ITGA6P23229 1130 aa10.09□□□□□ -0.79
FARP1-239ENST00000602171 PTGIRP43119 386 aa10.09□□□□□ -0.79
FARP1-239ENST00000602171 RAB15P59190 212 aa10.09□□□□□ -0.79
FARP1-239ENST00000602171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.09□□□□□ -0.79
FARP1-239ENST00000602171 ZNF592Q92610 1267 aa10.09□□□□□ -0.79
FARP1-239ENST00000602171 CNTNAP3BQ96NU0 1288 aa10.09□□□□□ -0.79
FARP1-239ENST00000602171 CNTNAP3Q9BZ76 1288 aa10.09□□□□□ -0.79
FARP1-239ENST00000602171 TMPRSS4Q9NRS4 437 aa10.09□□□□□ -0.79
FARP1-239ENST00000602171 SPATA31A6Q5VVP1 1343 aa10.08□□□□□ -0.8
FARP1-239ENST00000602171 SV2AQ7L0J3 742 aa10.08□□□□□ -0.8
FARP1-239ENST00000602171 GPR161Q8N6U8 529 aaKnown RBP10.08□□□□□ -0.8
FARP1-239ENST00000602171 RNF217Q8TC41 542 aa10.08□□□□□ -0.8
FARP1-239ENST00000602171 COL25A1Q9BXS0 654 aaPredicted RBP10.08□□□□□ -0.8
FARP1-239ENST00000602171 ZNF395Q9H8N7 513 aaPredicted RBP10.08□□□□□ -0.8
FARP1-239ENST00000602171 SSH2Q76I76 1423 aa10.07□□□□□ -0.8
FARP1-239ENST00000602171 NSD3Q9BZ95 1437 aa10.07□□□□□ -0.8
FARP1-239ENST00000602171 COL16A1Q07092 1604 aaPredicted RBP10.07□□□□□ -0.8
FARP1-239ENST00000602171 ZBBXA8MT70 800 aa10.07□□□□□ -0.8
FARP1-239ENST00000602171 LILRA1O75019 489 aa10.07□□□□□ -0.8
FARP1-239ENST00000602171 MCCD1P59942 119 aaPredicted RBP10.07□□□□□ -0.8
FARP1-239ENST00000602171 KCNH5Q8NCM2 988 aa10.07□□□□□ -0.8
FARP1-239ENST00000602171 COG3Q96JB2 828 aa10.07□□□□□ -0.8
FARP1-239ENST00000602171 TRIM34Q9BYJ4 488 aa10.07□□□□□ -0.8
FARP1-239ENST00000602171 NSD2O96028 1365 aa10.06□□□□□ -0.8
FARP1-239ENST00000602171 PNPLA6Q8IY17 1366 aa10.06□□□□□ -0.8
FARP1-239ENST00000602171 AKAP12Q02952 1782 aa10.06□□□□□ -0.8
FARP1-239ENST00000602171 USP31Q70CQ4 1352 aa10.05□□□□□ -0.8
FARP1-239ENST00000602171 RNF225M0QZC1 329 aaPredicted RBP10.05□□□□□ -0.8
FARP1-239ENST00000602171 ADD1P35611 737 aaKnown RBP10.05□□□□□ -0.8
FARP1-239ENST00000602171 KRT76Q01546 638 aa10.05□□□□□ -0.8
FARP1-239ENST00000602171 KCNMA1Q12791 1236 aa10.05□□□□□ -0.8
FARP1-239ENST00000602171 DDX10Q13206 875 aaKnown RBP10.05□□□□□ -0.8
FARP1-239ENST00000602171 RNF20Q5VTR2 975 aa10.05□□□□□ -0.8
FARP1-239ENST00000602171 MYOM1P52179 1685 aa10.05□□□□□ -0.8
FARP1-239ENST00000602171 MON2Q7Z3U7 1717 aa10.04□□□□□ -0.8
FARP1-239ENST00000602171 CDC14CA4D256 554 aa10.04□□□□□ -0.8
FARP1-239ENST00000602171 FYB1O15117 783 aa10.04□□□□□ -0.8
FARP1-239ENST00000602171 NUTM2GQ5VZR2 741 aa10.04□□□□□ -0.8
FARP1-239ENST00000602171 LYSMD3Q7Z3D4 306 aa10.04□□□□□ -0.8
FARP1-239ENST00000602171 NME9Q86XW9 330 aa10.04□□□□□ -0.8
FARP1-239ENST00000602171 VWA5B2Q8N398 1253 aa10.04□□□□□ -0.8
FARP1-239ENST00000602171 TRPM3Q9HCF6 1732 aaPredicted RBP10.04□□□□□ -0.8
FARP1-239ENST00000602171 GCP02774 474 aa10.03□□□□□ -0.8
FARP1-239ENST00000602171 NEUROD2Q15784 382 aa10.03□□□□□ -0.8
FARP1-239ENST00000602171 MEX3CQ5U5Q3 659 aaKnown RBP10.03□□□□□ -0.8
FARP1-239ENST00000602171 GGNBP2Q9H3C7 697 aa10.03□□□□□ -0.8
FARP1-239ENST00000602171 ZNF330Q9Y3S2 320 aaPredicted RBP10.03□□□□□ -0.8
FARP1-239ENST00000602171 PCDHB9Q9Y5E1 797 aa10.03□□□□□ -0.8
FARP1-239ENST00000602171 USP19O94966 1318 aa10.03□□□□□ -0.8
FARP1-239ENST00000602171 NPC1L1Q9UHC9 1359 aa10.02□□□□□ -0.8
FARP1-239ENST00000602171 NRKQ7Z2Y5 1582 aa10.02□□□□□ -0.81
FARP1-239ENST00000602171 RNF144AP50876 292 aaPredicted RBP10.02□□□□□ -0.81
FARP1-239ENST00000602171 MORC1Q86VD1 984 aa10.02□□□□□ -0.81
FARP1-239ENST00000602171 CYLDQ9NQC7 956 aa10.02□□□□□ -0.81
FARP1-239ENST00000602171 SHPRHQ149N8 1683 aa10.02□□□□□ -0.81
FARP1-239ENST00000602171 ALS2Q96Q42 1657 aa10.02□□□□□ -0.81
FARP1-239ENST00000602171 MED1Q15648 1581 aaPredicted RBP10.01□□□□□ -0.81
FARP1-239ENST00000602171 COL22A1Q8NFW1 1626 aaPredicted RBP10.01□□□□□ -0.81
FARP1-239ENST00000602171 ATP5J2-PTCD1G3V325 749 aa10.01□□□□□ -0.81
FARP1-239ENST00000602171 SLURP2P0DP57 97 aa10.01□□□□□ -0.81
FARP1-239ENST00000602171 GPC1P35052 558 aa10.01□□□□□ -0.81
FARP1-239ENST00000602171 FOXD4L5Q5VV16 416 aaPredicted RBP10.01□□□□□ -0.81
FARP1-239ENST00000602171 KDF1Q8NAX2 398 aaPredicted RBP10.01□□□□□ -0.81
FARP1-239ENST00000602171 GMCL1Q96IK5 515 aa10.01□□□□□ -0.81
FARP1-239ENST00000602171 OVOS2A0A0J9YW53 1432 aa10□□□□□ -0.81
FARP1-239ENST00000602171 OVOS2Q6IE36 1432 aa10□□□□□ -0.81
FARP1-239ENST00000602171 SENP3-EIF4A1A0A087X0R7 540 aa10□□□□□ -0.81
FARP1-239ENST00000602171 APBB1O00213 710 aa10□□□□□ -0.81
FARP1-239ENST00000602171 SOCS7O14512 581 aa10□□□□□ -0.81
FARP1-239ENST00000602171 BANK1Q8NDB2 785 aa10□□□□□ -0.81
FARP1-239ENST00000602171 IL27Q8NEV9 243 aa10□□□□□ -0.81
FARP1-239ENST00000602171 ADAMTS8Q9UP79 889 aa10□□□□□ -0.81
FARP1-239ENST00000602171 CPDO75976 1380 aa10□□□□□ -0.81
FARP1-239ENST00000602171 PIK3C2AO00443 1686 aa9.99□□□□□ -0.81
FARP1-239ENST00000602171 GIGYF1O75420 1035 aaPredicted RBP9.99□□□□□ -0.81
FARP1-239ENST00000602171 ADAMTS2O95450 1211 aa9.99□□□□□ -0.81
FARP1-239ENST00000602171 FBXO45P0C2W1 286 aa9.99□□□□□ -0.81
FARP1-239ENST00000602171 RNFT1Q5M7Z0 435 aa9.99□□□□□ -0.81
FARP1-239ENST00000602171 CC2D1BQ5T0F9 858 aaKnown RBP9.99□□□□□ -0.81
FARP1-239ENST00000602171 SVOPQ8N4V2 548 aa9.99□□□□□ -0.81
FARP1-239ENST00000602171 GJD4Q96KN9 370 aaPredicted RBP9.99□□□□□ -0.81
FARP1-239ENST00000602171 PRDM11Q9NQV5 511 aa9.99□□□□□ -0.81
FARP1-239ENST00000602171 SLIT3O75094 1523 aa9.98□□□□□ -0.81
FARP1-239ENST00000602171 ZC3H6P61129 1189 aaKnown RBP9.98□□□□□ -0.81
FARP1-239ENST00000602171 RALBP1Q15311 655 aa9.98□□□□□ -0.81
FARP1-239ENST00000602171 NGLY1Q96IV0 654 aa9.98□□□□□ -0.81
FARP1-239ENST00000602171 AATKQ6ZMQ8 1374 aa9.98□□□□□ -0.81
FARP1-239ENST00000602171 AMPHP49418 695 aa9.97□□□□□ -0.81
FARP1-239ENST00000602171 NR1H3Q13133 447 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms