RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 SF3B3Q15393 1217 aaKnown RBP20.22■□□□□ 0.83
PPFIA4-213ENST00000601609 SLC51AQ86UW1 340 aa20.22■□□□□ 0.83
PPFIA4-213ENST00000601609 CDCA7LQ96GN5 454 aa20.22■□□□□ 0.83
PPFIA4-213ENST00000601609 CCDC85AQ96PX6 553 aaPredicted RBP20.22■□□□□ 0.83
PPFIA4-213ENST00000601609 RRAGCQ9HB90 399 aa20.22■□□□□ 0.83
PPFIA4-213ENST00000601609 PDE8AO60658 829 aa20.21■□□□□ 0.83
PPFIA4-213ENST00000601609 PSMD1Q99460 953 aa20.21■□□□□ 0.83
PPFIA4-213ENST00000601609 TAF1P21675 1872 aa20.2■□□□□ 0.82
PPFIA4-213ENST00000601609 F6X3S4 739 aa20.2■□□□□ 0.82
PPFIA4-213ENST00000601609 CCDC152Q4G0S7 254 aa20.2■□□□□ 0.82
PPFIA4-213ENST00000601609 DPP8Q6V1X1 898 aaPredicted RBP20.2■□□□□ 0.82
PPFIA4-213ENST00000601609 JDP2Q8WYK2 163 aa20.2■□□□□ 0.82
PPFIA4-213ENST00000601609 UBE3BQ7Z3V4 1068 aa20.19■□□□□ 0.82
PPFIA4-213ENST00000601609 TMC4Q7Z404 712 aa20.19■□□□□ 0.82
PPFIA4-213ENST00000601609 SP8Q8IXZ3 490 aa20.19■□□□□ 0.82
PPFIA4-213ENST00000601609 LARGE2Q8N3Y3 721 aa20.19■□□□□ 0.82
PPFIA4-213ENST00000601609 CELF1Q92879 486 aaKnown RBP20.19■□□□□ 0.82
PPFIA4-213ENST00000601609 CDHR2Q9BYE9 1310 aa20.19■□□□□ 0.82
PPFIA4-213ENST00000601609 PPIP5K2O43314 1243 aa20.18■□□□□ 0.82
PPFIA4-213ENST00000601609 SLC4A10Q6U841 1118 aa20.18■□□□□ 0.82
PPFIA4-213ENST00000601609 MPNDQ8N594 471 aa20.18■□□□□ 0.82
PPFIA4-213ENST00000601609 SUPT20HQ8NEM7 779 aa20.18■□□□□ 0.82
PPFIA4-213ENST00000601609 LINS1Q8NG48 757 aa20.18■□□□□ 0.82
PPFIA4-213ENST00000601609 SNED1Q8TER0 1413 aa20.18■□□□□ 0.82
PPFIA4-213ENST00000601609 GCKRQ14397 625 aa20.17■□□□□ 0.82
PPFIA4-213ENST00000601609 DDNO94850 711 aaPredicted RBP20.16■□□□□ 0.82
PPFIA4-213ENST00000601609 CTSWP56202 376 aa20.16■□□□□ 0.82
PPFIA4-213ENST00000601609 NIM1KQ8IY84 436 aa20.16■□□□□ 0.82
PPFIA4-213ENST00000601609 BCL2L13Q9BXK5 485 aa20.16■□□□□ 0.82
PPFIA4-213ENST00000601609 SEC31BQ9NQW1 1179 aa20.16■□□□□ 0.82
PPFIA4-213ENST00000601609 TOMM70O94826 608 aa20.15■□□□□ 0.82
PPFIA4-213ENST00000601609 VEGFAP15692 232 aaPredicted RBP20.15■□□□□ 0.82
PPFIA4-213ENST00000601609 EIF6P56537 245 aaKnown RBP20.15■□□□□ 0.82
PPFIA4-213ENST00000601609 RPS8P62241 208 aaKnown RBP20.15■□□□□ 0.82
PPFIA4-213ENST00000601609 HNRNPUQ00839 825 aaKnown RBP eCLIP20.15■□□□□ 0.82
PPFIA4-213ENST00000601609 AOC3Q16853 763 aa20.15■□□□□ 0.82
PPFIA4-213ENST00000601609 ZNF541Q9H0D2 1346 aa20.15■□□□□ 0.82
PPFIA4-213ENST00000601609 MYH3P11055 1940 aa20.14■□□□□ 0.81
PPFIA4-213ENST00000601609 MRPL50Q8N5N7 158 aaKnown RBP20.14■□□□□ 0.81
PPFIA4-213ENST00000601609 SMC4Q9NTJ3 1288 aa20.14■□□□□ 0.81
PPFIA4-213ENST00000601609 NSFL1CQ9UNZ2 370 aaKnown RBP20.14■□□□□ 0.81
PPFIA4-213ENST00000601609 H7C1W4 665 aa20.13■□□□□ 0.81
PPFIA4-213ENST00000601609 ANKRD18AQ8IVF6 992 aa20.13■□□□□ 0.81
PPFIA4-213ENST00000601609 SSH1Q8WYL5 1049 aa20.13■□□□□ 0.81
PPFIA4-213ENST00000601609 CDC5LQ99459 802 aaKnown RBP20.13■□□□□ 0.81
PPFIA4-213ENST00000601609 GJA3Q9Y6H8 435 aa20.13■□□□□ 0.81
PPFIA4-213ENST00000601609 LRRC37AA6NMS7 1700 aa20.13■□□□□ 0.81
PPFIA4-213ENST00000601609 WDR90Q96KV7 1748 aa20.13■□□□□ 0.81
PPFIA4-213ENST00000601609 C6orf229H3BNL8 230 aa20.12■□□□□ 0.81
PPFIA4-213ENST00000601609 BEND3Q5T5X7 828 aa20.12■□□□□ 0.81
PPFIA4-213ENST00000601609 SRCIN1Q9C0H9 1055 aa20.12■□□□□ 0.81
PPFIA4-213ENST00000601609 COL4A1P02462 1669 aa20.12■□□□□ 0.81
PPFIA4-213ENST00000601609 RBM46Q8TBY0 533 aaKnown RBP20.11■□□□□ 0.81
PPFIA4-213ENST00000601609 GREM2Q9H772 168 aa20.11■□□□□ 0.81
PPFIA4-213ENST00000601609 C9orf78Q9NZ63 289 aaPredicted RBP20.11■□□□□ 0.81
PPFIA4-213ENST00000601609 CHMP3Q9Y3E7 222 aa20.11■□□□□ 0.81
PPFIA4-213ENST00000601609 COL4A5P29400 1685 aa20.1■□□□□ 0.81
PPFIA4-213ENST00000601609 PTPRCP08575 1304 aa20.1■□□□□ 0.81
PPFIA4-213ENST00000601609 IQCA1LA6NCM1 817 aa20.1■□□□□ 0.81
PPFIA4-213ENST00000601609 FZD9O00144 591 aa20.1■□□□□ 0.81
PPFIA4-213ENST00000601609 GPSM2P81274 684 aa20.1■□□□□ 0.81
PPFIA4-213ENST00000601609 ALDH1L2Q3SY69 923 aa20.1■□□□□ 0.81
PPFIA4-213ENST00000601609 TTLL11Q8NHH1 800 aa20.1■□□□□ 0.81
PPFIA4-213ENST00000601609 RTFDC1Q9BY42 306 aaPredicted RBP20.1■□□□□ 0.81
PPFIA4-213ENST00000601609 ANKIB1Q9P2G1 1089 aa20.1■□□□□ 0.81
PPFIA4-213ENST00000601609 SPEF2Q9C093 1822 aa20.09■□□□□ 0.81
PPFIA4-213ENST00000601609 CT47B1P0C2W7 299 aaPredicted RBP20.09■□□□□ 0.81
PPFIA4-213ENST00000601609 TRMT2AQ8IZ69 625 aaKnown RBP20.09■□□□□ 0.81
PPFIA4-213ENST00000601609 VPS33BQ9H267 617 aa20.09■□□□□ 0.81
PPFIA4-213ENST00000601609 GRM8O00222 908 aa20.08■□□□□ 0.81
PPFIA4-213ENST00000601609 RIMBP2O15034 1052 aa20.08■□□□□ 0.81
PPFIA4-213ENST00000601609 ALDH1L1O75891 902 aa20.08■□□□□ 0.81
PPFIA4-213ENST00000601609 UFL1O94874 794 aa20.08■□□□□ 0.81
PPFIA4-213ENST00000601609 IGHMBP2P38935 993 aaKnown RBP20.08■□□□□ 0.81
PPFIA4-213ENST00000601609 KIAA2012Q0VF49 1180 aa20.08■□□□□ 0.81
PPFIA4-213ENST00000601609 FAM161AQ3B820 660 aa20.08■□□□□ 0.81
PPFIA4-213ENST00000601609 GPC2Q8N158 579 aa20.08■□□□□ 0.81
PPFIA4-213ENST00000601609 SMC1BQ8NDV3 1235 aa20.08■□□□□ 0.81
PPFIA4-213ENST00000601609 EYA3Q99504 573 aa20.08■□□□□ 0.81
PPFIA4-213ENST00000601609 PLA2G12BQ9BX93 195 aa20.08■□□□□ 0.81
PPFIA4-213ENST00000601609 DUOX1Q9NRD9 1551 aa20.08■□□□□ 0.8
PPFIA4-213ENST00000601609 LMOD1P29536 600 aaPredicted RBP20.07■□□□□ 0.8
PPFIA4-213ENST00000601609 CASP7P55210 303 aa20.07■□□□□ 0.8
PPFIA4-213ENST00000601609 WASHC4Q2M389 1173 aa20.07■□□□□ 0.8
PPFIA4-213ENST00000601609 GGA1Q9UJY5 639 aa20.07■□□□□ 0.8
PPFIA4-213ENST00000601609 POTECB2RU33 542 aa20.06■□□□□ 0.8
PPFIA4-213ENST00000601609 G3V3G9 751 aa20.06■□□□□ 0.8
PPFIA4-213ENST00000601609 HSPA6P17066 643 aa20.06■□□□□ 0.8
PPFIA4-213ENST00000601609 ITGA6P23229 1130 aa20.06■□□□□ 0.8
PPFIA4-213ENST00000601609 EAPPQ56P03 285 aaPredicted RBP20.06■□□□□ 0.8
PPFIA4-213ENST00000601609 DCAF8Q5TAQ9 597 aa20.06■□□□□ 0.8
PPFIA4-213ENST00000601609 L3MBTL3Q96JM7 780 aaPredicted RBP20.06■□□□□ 0.8
PPFIA4-213ENST00000601609 GPR101Q96P66 508 aaPredicted RBP20.06■□□□□ 0.8
PPFIA4-213ENST00000601609 HACL1Q9UJ83 578 aa20.06■□□□□ 0.8
PPFIA4-213ENST00000601609 ZNRF3Q9ULT6 936 aa20.06■□□□□ 0.8
PPFIA4-213ENST00000601609 RTL9Q8NET4 1388 aa20.06■□□□□ 0.8
PPFIA4-213ENST00000601609 ANKRD18BA2A2Z9 1011 aa20.05■□□□□ 0.8
PPFIA4-213ENST00000601609 FSTL1Q12841 308 aa20.05■□□□□ 0.8
PPFIA4-213ENST00000601609 TBC1D16Q8TBP0 767 aa20.05■□□□□ 0.8
PPFIA4-213ENST00000601609 MPHOSPH8Q99549 860 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms