RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 NBPF7P0C2Y1 421 aaPredicted RBP18.45■□□□□ 0.54
LTBP4-228ENST00000600499 CTSWP56202 376 aa18.45■□□□□ 0.54
LTBP4-228ENST00000600499 GRAPQ13588 217 aa18.45■□□□□ 0.54
LTBP4-228ENST00000600499 CCDC152Q4G0S7 254 aa18.45■□□□□ 0.54
LTBP4-228ENST00000600499 DDX46Q7L014 1031 aaKnown RBP18.45■□□□□ 0.54
LTBP4-228ENST00000600499 GRAPLQ8TC17 118 aaPredicted RBP18.45■□□□□ 0.54
LTBP4-228ENST00000600499 FRAT1Q92837 279 aaPredicted RBP18.45■□□□□ 0.54
LTBP4-228ENST00000600499 C9orf78Q9NZ63 289 aaPredicted RBP18.45■□□□□ 0.54
LTBP4-228ENST00000600499 SNED1Q8TER0 1413 aa18.45■□□□□ 0.54
LTBP4-228ENST00000600499 FOXO4P98177 505 aa18.44■□□□□ 0.54
LTBP4-228ENST00000600499 SOGA3Q5TF21 947 aa18.44■□□□□ 0.54
LTBP4-228ENST00000600499 CC2D2BQ6DHV5 1058 aa18.44■□□□□ 0.54
LTBP4-228ENST00000600499 TMC4Q7Z404 712 aa18.44■□□□□ 0.54
LTBP4-228ENST00000600499 KAZALD1Q96I82 304 aa18.44■□□□□ 0.54
LTBP4-228ENST00000600499 GRIPAP1Q4V328 841 aa18.43■□□□□ 0.54
LTBP4-228ENST00000600499 PELP1Q8IZL8 1130 aaKnown RBP18.43■□□□□ 0.54
LTBP4-228ENST00000600499 WWC3Q9ULE0 1092 aa18.43■□□□□ 0.54
LTBP4-228ENST00000600499 TNNQ9UQP3 1299 aa18.43■□□□□ 0.54
LTBP4-228ENST00000600499 FER1L6Q2WGJ9 1857 aa18.43■□□□□ 0.54
LTBP4-228ENST00000600499 CACNA1SQ13698 1873 aa18.42■□□□□ 0.54
LTBP4-228ENST00000600499 RABL6Q3YEC7 729 aaPredicted RBP18.42■□□□□ 0.54
LTBP4-228ENST00000600499 LTBP3Q9NS15 1303 aa18.42■□□□□ 0.54
LTBP4-228ENST00000600499 C21orf2O43822 256 aa18.41■□□□□ 0.54
LTBP4-228ENST00000600499 EPHA10Q5JZY3 1008 aa18.41■□□□□ 0.54
LTBP4-228ENST00000600499 SP8Q8IXZ3 490 aa18.41■□□□□ 0.54
LTBP4-228ENST00000600499 DZIP1LQ8IYY4 767 aaKnown RBP18.41■□□□□ 0.54
LTBP4-228ENST00000600499 ATP6V0A2Q9Y487 856 aa18.41■□□□□ 0.54
LTBP4-228ENST00000600499 TAF1P21675 1872 aa18.41■□□□□ 0.54
LTBP4-228ENST00000600499 COL4A1P02462 1669 aa18.41■□□□□ 0.54
LTBP4-228ENST00000600499 PPEF1O14829 653 aaPredicted RBP18.4■□□□□ 0.54
LTBP4-228ENST00000600499 MS4A1P11836 297 aa18.4■□□□□ 0.54
LTBP4-228ENST00000600499 RPS8P62241 208 aaKnown RBP18.4■□□□□ 0.54
LTBP4-228ENST00000600499 CELF1Q92879 486 aaKnown RBP18.4■□□□□ 0.54
LTBP4-228ENST00000600499 SUCLG2Q96I99 432 aa18.4■□□□□ 0.54
LTBP4-228ENST00000600499 GREM2Q9H772 168 aa18.4■□□□□ 0.54
LTBP4-228ENST00000600499 SEC31BQ9NQW1 1179 aa18.4■□□□□ 0.54
LTBP4-228ENST00000600499 CHD4Q14839 1912 aa18.4■□□□□ 0.54
LTBP4-228ENST00000600499 LRRC37AA6NMS7 1700 aa18.4■□□□□ 0.54
LTBP4-228ENST00000600499 NFKBIEO00221 500 aa18.39■□□□□ 0.53
LTBP4-228ENST00000600499 RLBP1P12271 317 aa18.39■□□□□ 0.53
LTBP4-228ENST00000600499 CCDC93Q567U6 631 aa18.39■□□□□ 0.53
LTBP4-228ENST00000600499 RTKN2Q8IZC4 609 aa18.39■□□□□ 0.53
LTBP4-228ENST00000600499 TMEM57Q8N5G2 664 aa18.39■□□□□ 0.53
LTBP4-228ENST00000600499 CLUAP1Q96AJ1 413 aa18.39■□□□□ 0.53
LTBP4-228ENST00000600499 HDAC5Q9UQL6 1122 aa18.39■□□□□ 0.53
LTBP4-228ENST00000600499 ARHGAP27Q6ZUM4 889 aa18.38■□□□□ 0.53
LTBP4-228ENST00000600499 ANKRD44Q8N8A2 993 aa18.38■□□□□ 0.53
LTBP4-228ENST00000600499 CDC5LQ99459 802 aaKnown RBP18.38■□□□□ 0.53
LTBP4-228ENST00000600499 SBF1O95248 1867 aa18.37■□□□□ 0.53
LTBP4-228ENST00000600499 GNAI3P08754 354 aa18.37■□□□□ 0.53
LTBP4-228ENST00000600499 LMBR1LQ6UX01 489 aa18.37■□□□□ 0.53
LTBP4-228ENST00000600499 PSMD1Q99460 953 aa18.37■□□□□ 0.53
LTBP4-228ENST00000600499 MEIS3Q99687 375 aa18.37■□□□□ 0.53
LTBP4-228ENST00000600499 UBTFL1P0CB47 393 aaPredicted RBP18.36■□□□□ 0.53
LTBP4-228ENST00000600499 ITGA6P23229 1130 aa18.36■□□□□ 0.53
LTBP4-228ENST00000600499 PDE3AQ14432 1141 aa18.36■□□□□ 0.53
LTBP4-228ENST00000600499 FAM161AQ3B820 660 aa18.36■□□□□ 0.53
LTBP4-228ENST00000600499 OLFM4Q6UX06 510 aa18.36■□□□□ 0.53
LTBP4-228ENST00000600499 FTSJ3Q8IY81 847 aaKnown RBP18.36■□□□□ 0.53
LTBP4-228ENST00000600499 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.36■□□□□ 0.53
LTBP4-228ENST00000600499 RTFDC1Q9BY42 306 aaPredicted RBP18.36■□□□□ 0.53
LTBP4-228ENST00000600499 BICC1Q9H694 974 aaKnown RBP18.36■□□□□ 0.53
LTBP4-228ENST00000600499 BSDC1Q9NW68 430 aaPredicted RBP18.36■□□□□ 0.53
LTBP4-228ENST00000600499 ZBTB7BO15156 539 aaPredicted RBP18.35■□□□□ 0.53
LTBP4-228ENST00000600499 FKBP4Q02790 459 aaKnown RBP eCLIP18.35■□□□□ 0.53
LTBP4-228ENST00000600499 ANKRD18AQ8IVF6 992 aa18.35■□□□□ 0.53
LTBP4-228ENST00000600499 LTBP1Q14766 1721 aa18.35■□□□□ 0.53
LTBP4-228ENST00000600499 ANKRD18BA2A2Z9 1011 aa18.34■□□□□ 0.53
LTBP4-228ENST00000600499 PRELPP51888 382 aa18.34■□□□□ 0.53
LTBP4-228ENST00000600499 IFIT5Q13325 482 aaKnown RBP18.34■□□□□ 0.53
LTBP4-228ENST00000600499 CCDC85AQ96PX6 553 aaPredicted RBP18.34■□□□□ 0.53
LTBP4-228ENST00000600499 VPS33BQ9H267 617 aa18.34■□□□□ 0.53
LTBP4-228ENST00000600499 TAOK3Q9H2K8 898 aa18.34■□□□□ 0.53
LTBP4-228ENST00000600499 PODXL2Q9NZ53 605 aa18.34■□□□□ 0.53
LTBP4-228ENST00000600499 ZNF219Q9P2Y4 722 aaPredicted RBP18.34■□□□□ 0.53
LTBP4-228ENST00000600499 PLIN1O60240 522 aa18.33■□□□□ 0.52
LTBP4-228ENST00000600499 MTX1Q13505 466 aa18.33■□□□□ 0.52
LTBP4-228ENST00000600499 SLC51AQ86UW1 340 aa18.33■□□□□ 0.52
LTBP4-228ENST00000600499 PANK1Q8TE04 598 aa18.33■□□□□ 0.52
LTBP4-228ENST00000600499 DICER1Q9UPY3 1922 aaKnown RBP18.32■□□□□ 0.52
LTBP4-228ENST00000600499 LMNB1P20700 586 aa18.32■□□□□ 0.52
LTBP4-228ENST00000600499 CCDC57Q2TAC2 916 aa18.32■□□□□ 0.52
LTBP4-228ENST00000600499 TMX4Q9H1E5 349 aaPredicted RBP18.32■□□□□ 0.52
LTBP4-228ENST00000600499 ZC3H4Q9UPT8 1303 aaKnown RBP18.31■□□□□ 0.52
LTBP4-228ENST00000600499 DUOX1Q9NRD9 1551 aa18.31■□□□□ 0.52
LTBP4-228ENST00000600499 IGHMBP2P38935 993 aaKnown RBP18.31■□□□□ 0.52
LTBP4-228ENST00000600499 RFX5P48382 616 aaPredicted RBP18.31■□□□□ 0.52
LTBP4-228ENST00000600499 RASSF7Q02833 373 aa18.31■□□□□ 0.52
LTBP4-228ENST00000600499 MVPQ14764 893 aaKnown RBP18.31■□□□□ 0.52
LTBP4-228ENST00000600499 MPNDQ8N594 471 aa18.31■□□□□ 0.52
LTBP4-228ENST00000600499 MINPP1Q9UNW1 487 aa18.31■□□□□ 0.52
LTBP4-228ENST00000600499 LRRFIP2Q9Y608 721 aaKnown RBP18.31■□□□□ 0.52
LTBP4-228ENST00000600499 GNAI2P04899 355 aa18.3■□□□□ 0.52
LTBP4-228ENST00000600499 ITPRIPQ8IWB1 547 aa18.3■□□□□ 0.52
LTBP4-228ENST00000600499 SUPT20HQ8NEM7 779 aa18.3■□□□□ 0.52
LTBP4-228ENST00000600499 CCDC88AQ3V6T2 1871 aa18.3■□□□□ 0.52
LTBP4-228ENST00000600499 RRP1P56182 461 aaKnown RBP18.29■□□□□ 0.52
LTBP4-228ENST00000600499 GPSM2P81274 684 aa18.29■□□□□ 0.52
LTBP4-228ENST00000600499 C9orf131Q5VYM1 1079 aa18.29■□□□□ 0.52
LTBP4-228ENST00000600499 DPP8Q6V1X1 898 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms