RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 PPP4R2Q9NY27 417 aa27.29■■□□□ 1.96
LTBP4-224ENST00000599016 PCDHB15Q9Y5E8 787 aa27.29■■□□□ 1.96
LTBP4-224ENST00000599016 RIC1Q4ADV7 1423 aa27.28■■□□□ 1.96
LTBP4-224ENST00000599016 ABCC12Q96J65 1359 aa27.28■■□□□ 1.96
LTBP4-224ENST00000599016 HMMRO75330 724 aa27.28■■□□□ 1.96
LTBP4-224ENST00000599016 ATP8B2P98198 1209 aa27.28■■□□□ 1.96
LTBP4-224ENST00000599016 NLRP3Q96P20 1036 aa27.28■■□□□ 1.96
LTBP4-224ENST00000599016 CTSWP56202 376 aa27.27■■□□□ 1.96
LTBP4-224ENST00000599016 MTX1Q13505 466 aa27.27■■□□□ 1.96
LTBP4-224ENST00000599016 RABL6Q3YEC7 729 aaPredicted RBP27.27■■□□□ 1.96
LTBP4-224ENST00000599016 LMBR1LQ6UX01 489 aa27.27■■□□□ 1.96
LTBP4-224ENST00000599016 CHMP3Q9Y3E7 222 aa27.27■■□□□ 1.96
LTBP4-224ENST00000599016 GOLGB1Q14789 3259 aaKnown RBP27.26■■□□□ 1.96
LTBP4-224ENST00000599016 YBX3P16989 372 aaKnown RBP eCLIP27.26■■□□□ 1.95
LTBP4-224ENST00000599016 CCDC24Q8N4L8 307 aa27.26■■□□□ 1.95
LTBP4-224ENST00000599016 RWDD1Q9H446 243 aaPredicted RBP27.25■■□□□ 1.95
LTBP4-224ENST00000599016 SRGAP3O43295 1099 aa27.24■■□□□ 1.95
LTBP4-224ENST00000599016 CSF1RP07333 972 aa27.24■■□□□ 1.95
LTBP4-224ENST00000599016 CCDC152Q4G0S7 254 aa27.24■■□□□ 1.95
LTBP4-224ENST00000599016 TTLL11Q8NHH1 800 aa27.24■■□□□ 1.95
LTBP4-224ENST00000599016 CCDC136Q96JN2 1154 aa27.23■■□□□ 1.95
LTBP4-224ENST00000599016 BRIP1Q9BX63 1249 aa27.23■■□□□ 1.95
LTBP4-224ENST00000599016 ANKRD31Q8N7Z5 1873 aa27.23■■□□□ 1.95
LTBP4-224ENST00000599016 CEP350Q5VT06 3117 aa27.23■■□□□ 1.95
LTBP4-224ENST00000599016 TNRC6CQ9HCJ0 1690 aaKnown RBP27.22■■□□□ 1.95
LTBP4-224ENST00000599016 SF3B3Q15393 1217 aaKnown RBP27.22■■□□□ 1.95
LTBP4-224ENST00000599016 PNMA6EA0A0J9YXQ4 647 aa27.21■■□□□ 1.95
LTBP4-224ENST00000599016 PDE6BP35913 854 aa27.21■■□□□ 1.95
LTBP4-224ENST00000599016 HDAC1Q13547 482 aaPredicted RBP27.21■■□□□ 1.95
LTBP4-224ENST00000599016 SIRT2Q8IXJ6 389 aa27.21■■□□□ 1.95
LTBP4-224ENST00000599016 SSH3Q8TE77 659 aa27.21■■□□□ 1.95
LTBP4-224ENST00000599016 IFIT5Q13325 482 aaKnown RBP27.2■■□□□ 1.94
LTBP4-224ENST00000599016 POLA2Q14181 598 aa27.2■■□□□ 1.94
LTBP4-224ENST00000599016 CCDC57Q2TAC2 916 aa27.2■■□□□ 1.94
LTBP4-224ENST00000599016 CCDC85AQ96PX6 553 aaPredicted RBP27.2■■□□□ 1.94
LTBP4-224ENST00000599016 RTL9Q8NET4 1388 aa27.19■■□□□ 1.94
LTBP4-224ENST00000599016 ANKRD18BA2A2Z9 1011 aa27.18■■□□□ 1.94
LTBP4-224ENST00000599016 FAM161AQ3B820 660 aa27.18■■□□□ 1.94
LTBP4-224ENST00000599016 C3orf67Q6ZVT6 689 aa27.18■■□□□ 1.94
LTBP4-224ENST00000599016 GREM2Q9H772 168 aa27.18■■□□□ 1.94
LTBP4-224ENST00000599016 ITGA6P23229 1130 aa27.17■■□□□ 1.94
LTBP4-224ENST00000599016 TAF7LQ5H9L4 462 aa27.17■■□□□ 1.94
LTBP4-224ENST00000599016 PDZRN3Q9UPQ7 1066 aa27.17■■□□□ 1.94
LTBP4-224ENST00000599016 C10orf71Q711Q0 1435 aa27.16■■□□□ 1.94
LTBP4-224ENST00000599016 RPGRQ92834 1020 aaKnown RBP27.16■■□□□ 1.94
LTBP4-224ENST00000599016 KLRG2A4D1S0 409 aaPredicted RBP27.15■■□□□ 1.94
LTBP4-224ENST00000599016 DDX46Q7L014 1031 aaKnown RBP27.15■■□□□ 1.94
LTBP4-224ENST00000599016 KIF13BQ9NQT8 1826 aa27.15■■□□□ 1.94
LTBP4-224ENST00000599016 IGHDP01880 384 aa27.14■■□□□ 1.94
LTBP4-224ENST00000599016 RFX5P48382 616 aaPredicted RBP27.14■■□□□ 1.94
LTBP4-224ENST00000599016 CRY2Q49AN0 593 aa27.14■■□□□ 1.94
LTBP4-224ENST00000599016 B4GALNT3Q6L9W6 998 aa27.14■■□□□ 1.94
LTBP4-224ENST00000599016 RBM17Q96I25 401 aaKnown RBP27.14■■□□□ 1.94
LTBP4-224ENST00000599016 CDC5LQ99459 802 aaKnown RBP27.14■■□□□ 1.94
LTBP4-224ENST00000599016 COPRSQ9NQ92 184 aa27.13■■□□□ 1.93
LTBP4-224ENST00000599016 PTPN12Q05209 780 aaKnown RBP27.12■■□□□ 1.93
LTBP4-224ENST00000599016 HSP90AB4PQ58FF6 505 aa27.12■■□□□ 1.93
LTBP4-224ENST00000599016 SEC31BQ9NQW1 1179 aa27.12■■□□□ 1.93
LTBP4-224ENST00000599016 H0YIN7 160 aa27.11■■□□□ 1.93
LTBP4-224ENST00000599016 SURF6O75683 361 aaKnown RBP27.11■■□□□ 1.93
LTBP4-224ENST00000599016 IGHMBP2P38935 993 aaKnown RBP27.11■■□□□ 1.93
LTBP4-224ENST00000599016 C2CD5Q86YS7 1000 aa27.11■■□□□ 1.93
LTBP4-224ENST00000599016 GCC1Q96CN9 775 aa27.11■■□□□ 1.93
LTBP4-224ENST00000599016 DCTPP1Q9H773 170 aa27.11■■□□□ 1.93
LTBP4-224ENST00000599016 SPEF2Q9C093 1822 aa27.11■■□□□ 1.93
LTBP4-224ENST00000599016 TAF1P21675 1872 aa27.1■■□□□ 1.93
LTBP4-224ENST00000599016 COL11A2P13942 1736 aaPredicted RBP27.1■■□□□ 1.93
LTBP4-224ENST00000599016 NPR1P16066 1061 aa27.1■■□□□ 1.93
LTBP4-224ENST00000599016 G3BP1Q13283 466 aaKnown RBP eCLIP27.1■■□□□ 1.93
LTBP4-224ENST00000599016 ANKRD18AQ8IVF6 992 aa27.1■■□□□ 1.93
LTBP4-224ENST00000599016 PA2G4Q9UQ80 394 aaKnown RBP27.1■■□□□ 1.93
LTBP4-224ENST00000599016 NOP58Q9Y2X3 529 aaKnown RBP27.1■■□□□ 1.93
LTBP4-224ENST00000599016 SRGNP10124 158 aa27.09■■□□□ 1.93
LTBP4-224ENST00000599016 HOXA10P31260 410 aaPredicted RBP27.09■■□□□ 1.93
LTBP4-224ENST00000599016 OS9Q13438 667 aaPredicted RBP27.09■■□□□ 1.93
LTBP4-224ENST00000599016 CENPQQ7L2Z9 268 aaPredicted RBP27.09■■□□□ 1.93
LTBP4-224ENST00000599016 KLHDC4Q8TBB5 520 aa27.09■■□□□ 1.93
LTBP4-224ENST00000599016 MASTLQ96GX5 879 aa27.09■■□□□ 1.93
LTBP4-224ENST00000599016 ZNF594Q96JF6 807 aaPredicted RBP27.09■■□□□ 1.93
LTBP4-224ENST00000599016 CRAMP1Q96RY5 1269 aa27.09■■□□□ 1.93
LTBP4-224ENST00000599016 FBXO3Q9UK99 471 aa27.09■■□□□ 1.93
LTBP4-224ENST00000599016 GRIN3BO60391 1043 aa27.08■■□□□ 1.93
LTBP4-224ENST00000599016 MPHOSPH8Q99549 860 aa27.08■■□□□ 1.93
LTBP4-224ENST00000599016 SIL1Q9H173 461 aa27.08■■□□□ 1.93
LTBP4-224ENST00000599016 RAB11FIP3O75154 756 aa27.07■■□□□ 1.92
LTBP4-224ENST00000599016 ALDH1B1P30837 517 aa27.07■■□□□ 1.92
LTBP4-224ENST00000599016 GRAPQ13588 217 aa27.07■■□□□ 1.92
LTBP4-224ENST00000599016 LDHAL6AQ6ZMR3 332 aa27.07■■□□□ 1.92
LTBP4-224ENST00000599016 GRAPLQ8TC17 118 aaPredicted RBP27.07■■□□□ 1.92
LTBP4-224ENST00000599016 EXOC6BQ9Y2D4 811 aa27.07■■□□□ 1.92
LTBP4-224ENST00000599016 CD2APQ9Y5K6 639 aa27.07■■□□□ 1.92
LTBP4-224ENST00000599016 DLEC1Q9Y238 1755 aa27.07■■□□□ 1.92
LTBP4-224ENST00000599016 EYA2O00167 538 aa27.06■■□□□ 1.92
LTBP4-224ENST00000599016 TGFB2P61812 414 aa27.06■■□□□ 1.92
LTBP4-224ENST00000599016 RPS8P62241 208 aaKnown RBP27.06■■□□□ 1.92
LTBP4-224ENST00000599016 STYK1Q6J9G0 422 aa27.06■■□□□ 1.92
LTBP4-224ENST00000599016 ERC1Q8IUD2 1116 aa27.06■■□□□ 1.92
LTBP4-224ENST00000599016 SMC5Q8IY18 1101 aa27.06■■□□□ 1.92
LTBP4-224ENST00000599016 ZNF622Q969S3 477 aaKnown RBP eCLIP27.06■■□□□ 1.92
LTBP4-224ENST00000599016 CNNM1Q9NRU3 951 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms