RNA–Protein interactions for RNA: ENST00000597743.5

CALM3-209, Transcript of calmodulin 3, human

TSL 4 BASIC

Gene CALM3, Length 577 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALM3-209	ENST00000597743	PPEF1	O14829	653 aa	Predicted RBP	33.18	■■■□□ 2.9
CALM3-209	ENST00000597743	RIC3	Q7Z5B4	369 aa		33.18	■■■□□ 2.9
CALM3-209	ENST00000597743	ZNF428	Q96B54	188 aa		33.17	■■■□□ 2.9
CALM3-209	ENST00000597743	MKRN1	Q9UHC7	482 aa	Known RBP	33.17	■■■□□ 2.9
CALM3-209	ENST00000597743	CT47B1	P0C2W7	299 aa	Predicted RBP	33.16	■■■□□ 2.9
CALM3-209	ENST00000597743	FLII	Q13045	1269 aa		33.16	■■■□□ 2.9
CALM3-209	ENST00000597743	LARGE2	Q8N3Y3	721 aa		33.16	■■■□□ 2.9
CALM3-209	ENST00000597743	RNF123	Q5XPI4	1314 aa		33.16	■■■□□ 2.9
CALM3-209	ENST00000597743	PASK	Q96RG2	1323 aa		33.16	■■■□□ 2.9
CALM3-209	ENST00000597743	SNED1	Q8TER0	1413 aa		33.16	■■■□□ 2.9
CALM3-209	ENST00000597743	SLC10A5	Q5PT55	438 aa		33.14	■■■□□ 2.9
CALM3-209	ENST00000597743	KSR2	Q6VAB6	950 aa		33.14	■■■□□ 2.9
CALM3-209	ENST00000597743	GJA3	Q9Y6H8	435 aa		33.14	■■■□□ 2.9
CALM3-209	ENST00000597743	LMOD1	P29536	600 aa	Predicted RBP	33.13	■■■□□ 2.89
CALM3-209	ENST00000597743	TNS4	Q8IZW8	715 aa		33.13	■■■□□ 2.89
CALM3-209	ENST00000597743	TMEM88B	A6NKF7	163 aa		33.12	■■■□□ 2.89
CALM3-209	ENST00000597743	NLRP10	Q86W26	655 aa		33.12	■■■□□ 2.89
CALM3-209	ENST00000597743	ISCA1	Q9BUE6	129 aa		33.12	■■■□□ 2.89
CALM3-209	ENST00000597743	PI4KAP2	A4QPH2	592 aa		33.11	■■■□□ 2.89
CALM3-209	ENST00000597743	ITGBL1	O95965	494 aa	Predicted RBP	33.11	■■■□□ 2.89
CALM3-209	ENST00000597743	C3orf67	Q6ZVT6	689 aa		33.11	■■■□□ 2.89
CALM3-209	ENST00000597743	PI4KAP1	Q8N8J0	262 aa		33.11	■■■□□ 2.89
CALM3-209	ENST00000597743	MAP3K2	Q9Y2U5	619 aa		33.11	■■■□□ 2.89
CALM3-209	ENST00000597743	FKBP5	Q13451	457 aa	Predicted RBP	33.1	■■■□□ 2.89
CALM3-209	ENST00000597743	SSH1	Q8WYL5	1049 aa		33.1	■■■□□ 2.89
CALM3-209	ENST00000597743	METTL22	Q9BUU2	404 aa	Predicted RBP	33.1	■■■□□ 2.89
CALM3-209	ENST00000597743	CACNA1F	O60840	1977 aa		33.09	■■■□□ 2.89
CALM3-209	ENST00000597743	ATP5J2-PTCD1	G3V325	749 aa		33.09	■■■□□ 2.89
CALM3-209	ENST00000597743	TRIM28	Q13263	835 aa	Known RBP	33.09	■■■□□ 2.89
CALM3-209	ENST00000597743	NIM1K	Q8IY84	436 aa		33.09	■■■□□ 2.89
CALM3-209	ENST00000597743	CNTROB	Q8N137	903 aa		33.09	■■■□□ 2.89
CALM3-209	ENST00000597743	ATP6V0A2	Q9Y487	856 aa		33.09	■■■□□ 2.89
CALM3-209	ENST00000597743	CNTNAP1	P78357	1384 aa		33.09	■■■□□ 2.89
CALM3-209	ENST00000597743	ALDH1L2	Q3SY69	923 aa		33.08	■■■□□ 2.89
CALM3-209	ENST00000597743	MRPL50	Q8N5N7	158 aa	Known RBP	33.08	■■■□□ 2.89
CALM3-209	ENST00000597743	MYD88	Q99836	296 aa		33.08	■■■□□ 2.89
CALM3-209	ENST00000597743	VPS33B	Q9H267	617 aa		33.08	■■■□□ 2.89
CALM3-209	ENST00000597743	SUPT20H	Q8NEM7	779 aa		33.07	■■■□□ 2.88
CALM3-209	ENST00000597743	ANKRD36C	Q5JPF3	1778 aa		33.06	■■■□□ 2.88
CALM3-209	ENST00000597743	PPIP5K2	O43314	1243 aa		33.06	■■■□□ 2.88
CALM3-209	ENST00000597743	BBOX1	O75936	387 aa		33.06	■■■□□ 2.88
CALM3-209	ENST00000597743	TRMT112	Q9UI30	125 aa	Known RBP	33.06	■■■□□ 2.88
CALM3-209	ENST00000597743	MAP1S	Q66K74	1059 aa	Predicted RBP	33.05	■■■□□ 2.88
CALM3-209	ENST00000597743	ABCC4	O15439	1325 aa		33.04	■■■□□ 2.88
CALM3-209	ENST00000597743	ADAMTSL1	Q8N6G6	1762 aa		33.04	■■■□□ 2.88
CALM3-209	ENST00000597743	SH3TC1	Q8TE82	1336 aa		33.03	■■■□□ 2.88
CALM3-209	ENST00000597743	DDX46	Q7L014	1031 aa	Known RBP	33.03	■■■□□ 2.88
CALM3-209	ENST00000597743	BCL2L13	Q9BXK5	485 aa		33.03	■■■□□ 2.88
CALM3-209	ENST00000597743	SMC4	Q9NTJ3	1288 aa		33.03	■■■□□ 2.88
CALM3-209	ENST00000597743	COL4A5	P29400	1685 aa		33.03	■■■□□ 2.88
CALM3-209	ENST00000597743	HCLS1	P14317	486 aa	Predicted RBP	33.02	■■■□□ 2.88
CALM3-209	ENST00000597743	NEXN	Q0ZGT2	675 aa		33.02	■■■□□ 2.88
CALM3-209	ENST00000597743	CCDC191	Q8NCU4	936 aa		33.02	■■■□□ 2.88
CALM3-209	ENST00000597743	DNAAF4	Q8WXU2	420 aa		33.02	■■■□□ 2.88
CALM3-209	ENST00000597743	AOC3	Q16853	763 aa		33.01	■■■□□ 2.87
CALM3-209	ENST00000597743	DPP8	Q6V1X1	898 aa	Predicted RBP	33.01	■■■□□ 2.87
CALM3-209	ENST00000597743	SP8	Q8IXZ3	490 aa		33.01	■■■□□ 2.87
CALM3-209	ENST00000597743	SCNN1D	P51172	638 aa		33	■■■□□ 2.87
CALM3-209	ENST00000597743	RARS	P54136	660 aa	Known RBP	33	■■■□□ 2.87
CALM3-209	ENST00000597743	IGKV5-2	P06315	115 aa		32.99	■■■□□ 2.87
CALM3-209	ENST00000597743	EPS15	P42566	896 aa		32.99	■■■□□ 2.87
CALM3-209	ENST00000597743	VEGFB	P49765	207 aa		32.99	■■■□□ 2.87
CALM3-209	ENST00000597743	USP50	Q70EL3	339 aa	Predicted RBP	32.99	■■■□□ 2.87
CALM3-209	ENST00000597743	SLC51A	Q86UW1	340 aa		32.99	■■■□□ 2.87
CALM3-209	ENST00000597743	MPND	Q8N594	471 aa		32.99	■■■□□ 2.87
CALM3-209	ENST00000597743		F6X3S4	739 aa		32.98	■■■□□ 2.87
CALM3-209	ENST00000597743	AIDA	Q96BJ3	306 aa		32.98	■■■□□ 2.87
CALM3-209	ENST00000597743	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.98	■■■□□ 2.87
CALM3-209	ENST00000597743	CWC25	Q9NXE8	425 aa	Predicted RBP	32.98	■■■□□ 2.87
CALM3-209	ENST00000597743	ZNRF3	Q9ULT6	936 aa		32.98	■■■□□ 2.87
CALM3-209	ENST00000597743	CAPN15	O75808	1086 aa		32.97	■■■□□ 2.87
CALM3-209	ENST00000597743	PTPRC	P08575	1304 aa		32.97	■■■□□ 2.87
CALM3-209	ENST00000597743	BRPF1	P55201	1214 aa	Predicted RBP	32.96	■■■□□ 2.87
CALM3-209	ENST00000597743	GRAP	Q13588	217 aa		32.96	■■■□□ 2.87
CALM3-209	ENST00000597743	DEFB115	Q30KQ5	88 aa		32.96	■■■□□ 2.87
CALM3-209	ENST00000597743	TMC4	Q7Z404	712 aa		32.96	■■■□□ 2.87
CALM3-209	ENST00000597743	GRAPL	Q8TC17	118 aa	Predicted RBP	32.96	■■■□□ 2.87
CALM3-209	ENST00000597743	LAMB2	P55268	1798 aa		32.96	■■■□□ 2.87
CALM3-209	ENST00000597743	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.95	■■■□□ 2.87
CALM3-209	ENST00000597743	LINS1	Q8NG48	757 aa		32.95	■■■□□ 2.87
CALM3-209	ENST00000597743	FAM89A	Q96GI7	184 aa		32.95	■■■□□ 2.87
CALM3-209	ENST00000597743	ABT1	Q9ULW3	272 aa	Known RBP	32.95	■■■□□ 2.87
CALM3-209	ENST00000597743	RASSF10	A6NK89	507 aa		32.94	■■■□□ 2.86
CALM3-209	ENST00000597743	NEURL1B	A8MQ27	555 aa		32.94	■■■□□ 2.86
CALM3-209	ENST00000597743	CWF19L2	Q2TBE0	894 aa	Known RBP	32.94	■■■□□ 2.86
CALM3-209	ENST00000597743	ADARB2	Q9NS39	739 aa	Known RBP	32.93	■■■□□ 2.86
CALM3-209	ENST00000597743	GPRC5D	Q9NZD1	345 aa		32.93	■■■□□ 2.86
CALM3-209	ENST00000597743	LTBP1	Q14766	1721 aa		32.93	■■■□□ 2.86
CALM3-209	ENST00000597743	PCCA	P05165	728 aa	Predicted RBP	32.92	■■■□□ 2.86
CALM3-209	ENST00000597743	CXCL9	Q07325	125 aa		32.92	■■■□□ 2.86
CALM3-209	ENST00000597743	KIAA2012	Q0VF49	1180 aa		32.92	■■■□□ 2.86
CALM3-209	ENST00000597743	FOXN1	O15353	648 aa		32.91	■■■□□ 2.86
CALM3-209	ENST00000597743	BEND3	Q5T5X7	828 aa		32.91	■■■□□ 2.86
CALM3-209	ENST00000597743	CTCF	P49711	727 aa	Predicted RBP	32.9	■■■□□ 2.86
CALM3-209	ENST00000597743	TNIP1	Q15025	636 aa		32.9	■■■□□ 2.86
CALM3-209	ENST00000597743	RTL5	Q5HYW3	569 aa	Predicted RBP	32.9	■■■□□ 2.86
CALM3-209	ENST00000597743	CIAPIN1	Q6FI81	312 aa		32.9	■■■□□ 2.86
CALM3-209	ENST00000597743	GCKR	Q14397	625 aa		32.89	■■■□□ 2.86
CALM3-209	ENST00000597743	NOB1	Q9ULX3	412 aa	Known RBP	32.89	■■■□□ 2.86
CALM3-209	ENST00000597743	IRS4	O14654	1257 aa	Predicted RBP	32.88	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms