RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 BEND3Q5T5X7 828 aa18.29■□□□□ 0.52
IRF3-219ENST00000597636 GPATCH3Q96I76 525 aa18.29■□□□□ 0.52
IRF3-219ENST00000597636 BLOC1S2Q6QNY1 142 aa18.29■□□□□ 0.52
IRF3-219ENST00000597636 ALDH8A1Q9H2A2 487 aaPredicted RBP18.29■□□□□ 0.52
IRF3-219ENST00000597636 SKILP12757 684 aa18.28■□□□□ 0.52
IRF3-219ENST00000597636 ERO1AQ96HE7 468 aa18.28■□□□□ 0.52
IRF3-219ENST00000597636 BCL11BQ9C0K0 894 aaPredicted RBP18.28■□□□□ 0.52
IRF3-219ENST00000597636 GIGYF1O75420 1035 aaPredicted RBP18.28■□□□□ 0.52
IRF3-219ENST00000597636 LTV1Q96GA3 475 aaPredicted RBP18.28■□□□□ 0.52
IRF3-219ENST00000597636 ZNF142P52746 1687 aaPredicted RBP18.28■□□□□ 0.52
IRF3-219ENST00000597636 IFIT2P09913 472 aaKnown RBP18.28■□□□□ 0.52
IRF3-219ENST00000597636 RPS6KB1P23443 525 aa18.28■□□□□ 0.52
IRF3-219ENST00000597636 AMPHP49418 695 aa18.28■□□□□ 0.52
IRF3-219ENST00000597636 BBXQ8WY36 941 aaPredicted RBP18.28■□□□□ 0.52
IRF3-219ENST00000597636 FAM227BQ96M60 508 aa18.28■□□□□ 0.52
IRF3-219ENST00000597636 TCEANC2Q96MN5 208 aa18.28■□□□□ 0.52
IRF3-219ENST00000597636 SLFNL1Q499Z3 407 aa18.27■□□□□ 0.52
IRF3-219ENST00000597636 DNAAF4Q8WXU2 420 aa18.27■□□□□ 0.52
IRF3-219ENST00000597636 TMEM51Q9NW97 253 aa18.27■□□□□ 0.52
IRF3-219ENST00000597636 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.27■□□□□ 0.52
IRF3-219ENST00000597636 V9GYY5 206 aaPredicted RBP18.27■□□□□ 0.52
IRF3-219ENST00000597636 CHD2O14647 1828 aaKnown RBP18.27■□□□□ 0.52
IRF3-219ENST00000597636 CCDC66A2RUB6 948 aa18.27■□□□□ 0.51
IRF3-219ENST00000597636 HIP1O00291 1037 aa18.27■□□□□ 0.51
IRF3-219ENST00000597636 MTX1Q13505 466 aa18.27■□□□□ 0.51
IRF3-219ENST00000597636 TOB2Q14106 344 aaPredicted RBP18.27■□□□□ 0.51
IRF3-219ENST00000597636 FBXO38Q6PIJ6 1188 aa18.27■□□□□ 0.51
IRF3-219ENST00000597636 NMIQ13287 307 aaPredicted RBP18.26■□□□□ 0.51
IRF3-219ENST00000597636 RNF20Q5VTR2 975 aa18.26■□□□□ 0.51
IRF3-219ENST00000597636 SNRKQ9NRH2 765 aa18.26■□□□□ 0.51
IRF3-219ENST00000597636 PI4KAP2A4QPH2 592 aa18.26■□□□□ 0.51
IRF3-219ENST00000597636 C11orf57Q6ZUT1 292 aaPredicted RBP18.26■□□□□ 0.51
IRF3-219ENST00000597636 PI4KAP1Q8N8J0 262 aa18.26■□□□□ 0.51
IRF3-219ENST00000597636 GTF2E1P29083 439 aaPredicted RBP18.25■□□□□ 0.51
IRF3-219ENST00000597636 ELF2Q15723 593 aa18.25■□□□□ 0.51
IRF3-219ENST00000597636 CCDC69A6NI79 296 aa18.25■□□□□ 0.51
IRF3-219ENST00000597636 EIF2S2P20042 333 aaKnown RBP18.25■□□□□ 0.51
IRF3-219ENST00000597636 CCZ1BP86790 482 aa18.25■□□□□ 0.51
IRF3-219ENST00000597636 CCZ1P86791 482 aaPredicted RBP18.25■□□□□ 0.51
IRF3-219ENST00000597636 RESTQ13127 1097 aa18.25■□□□□ 0.51
IRF3-219ENST00000597636 USP16Q9Y5T5 823 aa18.25■□□□□ 0.51
IRF3-219ENST00000597636 STK3Q13188 491 aa18.24■□□□□ 0.51
IRF3-219ENST00000597636 CCAR2Q8N163 923 aaKnown RBP18.24■□□□□ 0.51
IRF3-219ENST00000597636 KCND1Q9NSA2 647 aa18.24■□□□□ 0.51
IRF3-219ENST00000597636 TRMT1Q9NXH9 659 aaKnown RBP18.24■□□□□ 0.51
IRF3-219ENST00000597636 ZNF335Q9H4Z2 1342 aaPredicted RBP18.24■□□□□ 0.51
IRF3-219ENST00000597636 SLU7O95391 586 aaKnown RBP18.24■□□□□ 0.51
IRF3-219ENST00000597636 STX1AQ16623 288 aa18.24■□□□□ 0.51
IRF3-219ENST00000597636 ERC1Q8IUD2 1116 aa18.24■□□□□ 0.51
IRF3-219ENST00000597636 TAF6LQ9Y6J9 622 aa18.24■□□□□ 0.51
IRF3-219ENST00000597636 CTAGE5O15320 804 aa18.24■□□□□ 0.51
IRF3-219ENST00000597636 FILIP1Q7Z7B0 1213 aa18.24■□□□□ 0.51
IRF3-219ENST00000597636 CFAP45Q9UL16 551 aa18.24■□□□□ 0.51
IRF3-219ENST00000597636 TMEM94Q12767 1356 aa18.23■□□□□ 0.51
IRF3-219ENST00000597636 FMN2Q9NZ56 1722 aa18.23■□□□□ 0.51
IRF3-219ENST00000597636 FAM193AP78312 1265 aa18.23■□□□□ 0.51
IRF3-219ENST00000597636 AACSQ86V21 672 aa18.23■□□□□ 0.51
IRF3-219ENST00000597636 ADCY9O60503 1353 aa18.23■□□□□ 0.51
IRF3-219ENST00000597636 ERBB3P21860 1342 aa18.23■□□□□ 0.51
IRF3-219ENST00000597636 BECN2A8MW95 431 aa18.22■□□□□ 0.51
IRF3-219ENST00000597636 KIF2AO00139 706 aaPredicted RBP18.22■□□□□ 0.51
IRF3-219ENST00000597636 JAK2O60674 1132 aa18.22■□□□□ 0.51
IRF3-219ENST00000597636 ATF3P18847 181 aa18.22■□□□□ 0.51
IRF3-219ENST00000597636 BRF1Q92994 677 aa18.22■□□□□ 0.51
IRF3-219ENST00000597636 ZSCAN16Q9H4T2 348 aaPredicted RBP18.22■□□□□ 0.51
IRF3-219ENST00000597636 CHPF2Q9P2E5 772 aa18.22■□□□□ 0.51
IRF3-219ENST00000597636 PA2G4Q9UQ80 394 aaKnown RBP18.22■□□□□ 0.51
IRF3-219ENST00000597636 A0A0D9SFI3 127 aa18.22■□□□□ 0.51
IRF3-219ENST00000597636 TSGA10IPQ3SY00 556 aa18.21■□□□□ 0.51
IRF3-219ENST00000597636 GTF3C6Q969F1 213 aa18.21■□□□□ 0.51
IRF3-219ENST00000597636 C19orf44Q9H6X5 657 aa18.21■□□□□ 0.51
IRF3-219ENST00000597636 ZNF446Q9NWS9 450 aa18.21■□□□□ 0.51
IRF3-219ENST00000597636 HMG20BQ9P0W2 317 aa18.21■□□□□ 0.51
IRF3-219ENST00000597636 CREBRFQ8IUR6 639 aa18.2■□□□□ 0.5
IRF3-219ENST00000597636 DHX40Q8IX18 779 aaKnown RBP18.2■□□□□ 0.5
IRF3-219ENST00000597636 DDX11Q96FC9 970 aa18.2■□□□□ 0.5
IRF3-219ENST00000597636 TOPAZ1Q8N9V7 1692 aa18.2■□□□□ 0.5
IRF3-219ENST00000597636 H3BQV1 296 aa18.2■□□□□ 0.5
IRF3-219ENST00000597636 IFFO2Q5TF58 517 aa18.2■□□□□ 0.5
IRF3-219ENST00000597636 TIGD1Q96MW7 591 aa18.2■□□□□ 0.5
IRF3-219ENST00000597636 ZBTB22O15209 634 aa18.19■□□□□ 0.5
IRF3-219ENST00000597636 HOXB7P09629 217 aa18.19■□□□□ 0.5
IRF3-219ENST00000597636 GSDMDP57764 484 aa18.19■□□□□ 0.5
IRF3-219ENST00000597636 EIF4A1P60842 406 aaKnown RBP18.19■□□□□ 0.5
IRF3-219ENST00000597636 CCAR1Q8IX12 1150 aaKnown RBP18.19■□□□□ 0.5
IRF3-219ENST00000597636 ANO10Q9NW15 660 aa18.19■□□□□ 0.5
IRF3-219ENST00000597636 MED23Q9ULK4 1368 aa18.19■□□□□ 0.5
IRF3-219ENST00000597636 H2AFXP16104 143 aaPredicted RBP18.19■□□□□ 0.5
IRF3-219ENST00000597636 CHMP4AQ9BY43 222 aa18.19■□□□□ 0.5
IRF3-219ENST00000597636 L2HGDHQ9H9P8 463 aa18.19■□□□□ 0.5
IRF3-219ENST00000597636 ST7Q9NRC1 585 aa18.19■□□□□ 0.5
IRF3-219ENST00000597636 RCOR1Q9UKL0 485 aa18.19■□□□□ 0.5
IRF3-219ENST00000597636 ADD1P35611 737 aaKnown RBP18.18■□□□□ 0.5
IRF3-219ENST00000597636 BMS1Q14692 1282 aaKnown RBP18.18■□□□□ 0.5
IRF3-219ENST00000597636 EAF2Q96CJ1 260 aaPredicted RBP18.18■□□□□ 0.5
IRF3-219ENST00000597636 FSD1Q9BTV5 496 aa18.18■□□□□ 0.5
IRF3-219ENST00000597636 CEBPZQ03701 1054 aaKnown RBP18.18■□□□□ 0.5
IRF3-219ENST00000597636 C9orf78Q9NZ63 289 aaPredicted RBP18.18■□□□□ 0.5
IRF3-219ENST00000597636 SNW1Q13573 536 aaKnown RBP18.17■□□□□ 0.5
IRF3-219ENST00000597636 OSBPL5Q9H0X9 879 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms