RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 SOGA3Q5TF21 947 aa18.11■□□□□ 0.49
LIG1-208ENST00000595758 TTLL11Q8NHH1 800 aa18.11■□□□□ 0.49
LIG1-208ENST00000595758 GRAPLQ8TC17 118 aaPredicted RBP18.11■□□□□ 0.49
LIG1-208ENST00000595758 CLUAP1Q96AJ1 413 aa18.11■□□□□ 0.49
LIG1-208ENST00000595758 CCDC85AQ96PX6 553 aaPredicted RBP18.11■□□□□ 0.49
LIG1-208ENST00000595758 USP44Q9H0E7 712 aa18.11■□□□□ 0.49
LIG1-208ENST00000595758 TNNQ9UQP3 1299 aa18.11■□□□□ 0.49
LIG1-208ENST00000595758 ARFGEF1Q9Y6D6 1849 aa18.1■□□□□ 0.49
LIG1-208ENST00000595758 LAMB2P55268 1798 aa18.1■□□□□ 0.49
LIG1-208ENST00000595758 UTYO14607 1347 aa18.1■□□□□ 0.49
LIG1-208ENST00000595758 PPEF1O14829 653 aaPredicted RBP18.1■□□□□ 0.49
LIG1-208ENST00000595758 NBPF7P0C2Y1 421 aaPredicted RBP18.1■□□□□ 0.49
LIG1-208ENST00000595758 INTS3Q68E01 1043 aaKnown RBP18.1■□□□□ 0.49
LIG1-208ENST00000595758 CSF1RP07333 972 aa18.08■□□□□ 0.48
LIG1-208ENST00000595758 RPS8P62241 208 aaKnown RBP18.08■□□□□ 0.48
LIG1-208ENST00000595758 FOXO4P98177 505 aa18.08■□□□□ 0.48
LIG1-208ENST00000595758 CCDC93Q567U6 631 aa18.08■□□□□ 0.48
LIG1-208ENST00000595758 CC2D2BQ6DHV5 1058 aa18.08■□□□□ 0.48
LIG1-208ENST00000595758 OLFM4Q6UX06 510 aa18.08■□□□□ 0.48
LIG1-208ENST00000595758 FTSJ3Q8IY81 847 aaKnown RBP18.08■□□□□ 0.48
LIG1-208ENST00000595758 DZIP1LQ8IYY4 767 aaKnown RBP18.08■□□□□ 0.48
LIG1-208ENST00000595758 CELF1Q92879 486 aaKnown RBP18.08■□□□□ 0.48
LIG1-208ENST00000595758 TMX4Q9H1E5 349 aaPredicted RBP18.08■□□□□ 0.48
LIG1-208ENST00000595758 SEC31BQ9NQW1 1179 aa18.08■□□□□ 0.48
LIG1-208ENST00000595758 EPHA10Q5JZY3 1008 aa18.07■□□□□ 0.48
LIG1-208ENST00000595758 TMC4Q7Z404 712 aa18.07■□□□□ 0.48
LIG1-208ENST00000595758 SUCLG2Q96I99 432 aa18.07■□□□□ 0.48
LIG1-208ENST00000595758 GREM2Q9H772 168 aa18.07■□□□□ 0.48
LIG1-208ENST00000595758 ATP6V0A2Q9Y487 856 aa18.07■□□□□ 0.48
LIG1-208ENST00000595758 GOLGB1Q14789 3259 aaKnown RBP18.07■□□□□ 0.48
LIG1-208ENST00000595758 RTL9Q8NET4 1388 aa18.06■□□□□ 0.48
LIG1-208ENST00000595758 CACNA1SQ13698 1873 aa18.06■□□□□ 0.48
LIG1-208ENST00000595758 LMBR1LQ6UX01 489 aa18.06■□□□□ 0.48
LIG1-208ENST00000595758 SP8Q8IXZ3 490 aa18.06■□□□□ 0.48
LIG1-208ENST00000595758 RTKN2Q8IZC4 609 aa18.06■□□□□ 0.48
LIG1-208ENST00000595758 TMEM57Q8N5G2 664 aa18.06■□□□□ 0.48
LIG1-208ENST00000595758 CHMP3Q9Y3E7 222 aa18.06■□□□□ 0.48
LIG1-208ENST00000595758 NFKBIEO00221 500 aa18.05■□□□□ 0.48
LIG1-208ENST00000595758 UBTFL1P0CB47 393 aaPredicted RBP18.05■□□□□ 0.48
LIG1-208ENST00000595758 MS4A1P11836 297 aa18.05■□□□□ 0.48
LIG1-208ENST00000595758 FAM161AQ3B820 660 aa18.05■□□□□ 0.48
LIG1-208ENST00000595758 GRIPAP1Q4V328 841 aa18.05■□□□□ 0.48
LIG1-208ENST00000595758 ANKRD18AQ8IVF6 992 aa18.05■□□□□ 0.48
LIG1-208ENST00000595758 KAZALD1Q96I82 304 aa18.05■□□□□ 0.48
LIG1-208ENST00000595758 CDC5LQ99459 802 aaKnown RBP18.05■□□□□ 0.48
LIG1-208ENST00000595758 HDAC5Q9UQL6 1122 aa18.05■□□□□ 0.48
LIG1-208ENST00000595758 RLBP1P12271 317 aa18.04■□□□□ 0.48
LIG1-208ENST00000595758 ITGA6P23229 1130 aa18.04■□□□□ 0.48
LIG1-208ENST00000595758 RASSF7Q02833 373 aa18.04■□□□□ 0.48
LIG1-208ENST00000595758 MEIS3Q99687 375 aa18.04■□□□□ 0.48
LIG1-208ENST00000595758 TAOK3Q9H2K8 898 aa18.04■□□□□ 0.48
LIG1-208ENST00000595758 BICC1Q9H694 974 aaKnown RBP18.04■□□□□ 0.48
LIG1-208ENST00000595758 ANKRD18BA2A2Z9 1011 aa18.03■□□□□ 0.48
LIG1-208ENST00000595758 PLIN1O60240 522 aa18.03■□□□□ 0.48
LIG1-208ENST00000595758 GNAI3P08754 354 aa18.03■□□□□ 0.48
LIG1-208ENST00000595758 IFIT5Q13325 482 aaKnown RBP18.03■□□□□ 0.48
LIG1-208ENST00000595758 SLC51AQ86UW1 340 aa18.03■□□□□ 0.48
LIG1-208ENST00000595758 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.03■□□□□ 0.48
LIG1-208ENST00000595758 PANK1Q8TE04 598 aa18.03■□□□□ 0.48
LIG1-208ENST00000595758 MYH3P11055 1940 aa18.03■□□□□ 0.48
LIG1-208ENST00000595758 TAF1P21675 1872 aa18.03■□□□□ 0.48
LIG1-208ENST00000595758 LTBP3Q9NS15 1303 aa18.02■□□□□ 0.48
LIG1-208ENST00000595758 LMNB1P20700 586 aa18.02■□□□□ 0.48
LIG1-208ENST00000595758 FKBP4Q02790 459 aaKnown RBP eCLIP18.02■□□□□ 0.48
LIG1-208ENST00000595758 CCDC57Q2TAC2 916 aa18.02■□□□□ 0.48
LIG1-208ENST00000595758 C9orf131Q5VYM1 1079 aa18.02■□□□□ 0.48
LIG1-208ENST00000595758 ANKRD44Q8N8A2 993 aa18.02■□□□□ 0.48
LIG1-208ENST00000595758 IGHMBP2P38935 993 aaKnown RBP18.01■□□□□ 0.47
LIG1-208ENST00000595758 RABL6Q3YEC7 729 aaPredicted RBP18.01■□□□□ 0.47
LIG1-208ENST00000595758 ITPRIPQ8IWB1 547 aa18.01■□□□□ 0.47
LIG1-208ENST00000595758 MPNDQ8N594 471 aa18.01■□□□□ 0.47
LIG1-208ENST00000595758 PSMD1Q99460 953 aa18.01■□□□□ 0.47
LIG1-208ENST00000595758 COL4A1P02462 1669 aa18■□□□□ 0.47
LIG1-208ENST00000595758 PRELPP51888 382 aa18■□□□□ 0.47
LIG1-208ENST00000595758 DPP8Q6V1X1 898 aaPredicted RBP18■□□□□ 0.47
LIG1-208ENST00000595758 MPHOSPH8Q99549 860 aa18■□□□□ 0.47
LIG1-208ENST00000595758 BSDC1Q9NW68 430 aaPredicted RBP18■□□□□ 0.47
LIG1-208ENST00000595758 RNF181Q9P0P0 153 aa18■□□□□ 0.47
LIG1-208ENST00000595758 LRRFIP2Q9Y608 721 aaKnown RBP18■□□□□ 0.47
LIG1-208ENST00000595758 SNED1Q8TER0 1413 aa17.99■□□□□ 0.47
LIG1-208ENST00000595758 FER1L6Q2WGJ9 1857 aa17.99■□□□□ 0.47
LIG1-208ENST00000595758 YY1P25490 414 aa17.99■□□□□ 0.47
LIG1-208ENST00000595758 TAF7LQ5H9L4 462 aa17.99■□□□□ 0.47
LIG1-208ENST00000595758 ZNF277Q9NRM2 450 aaPredicted RBP17.99■□□□□ 0.47
LIG1-208ENST00000595758 NSFL1CQ9UNZ2 370 aaKnown RBP17.99■□□□□ 0.47
LIG1-208ENST00000595758 CHD4Q14839 1912 aa17.99■□□□□ 0.47
LIG1-208ENST00000595758 UTRNP46939 3433 aa17.99■□□□□ 0.47
LIG1-208ENST00000595758 GNAI2P04899 355 aa17.98■□□□□ 0.47
LIG1-208ENST00000595758 GPSM2P81274 684 aa17.98■□□□□ 0.47
LIG1-208ENST00000595758 PDE3AQ14432 1141 aa17.97■□□□□ 0.47
LIG1-208ENST00000595758 SUPT20HQ8NEM7 779 aa17.97■□□□□ 0.47
LIG1-208ENST00000595758 ZNF594Q96JF6 807 aaPredicted RBP17.97■□□□□ 0.47
LIG1-208ENST00000595758 RTFDC1Q9BY42 306 aaPredicted RBP17.97■□□□□ 0.47
LIG1-208ENST00000595758 ANKIB1Q9P2G1 1089 aa17.97■□□□□ 0.47
LIG1-208ENST00000595758 MINPP1Q9UNW1 487 aa17.97■□□□□ 0.47
LIG1-208ENST00000595758 ZBTB7BO15156 539 aaPredicted RBP17.96■□□□□ 0.47
LIG1-208ENST00000595758 COG6Q9Y2V7 657 aa17.96■□□□□ 0.47
LIG1-208ENST00000595758 C6orf229H3BNL8 230 aa17.95■□□□□ 0.46
LIG1-208ENST00000595758 IARSP41252 1262 aaKnown RBP17.95■□□□□ 0.46
LIG1-208ENST00000595758 MVPQ14764 893 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms