RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 GJA3Q9Y6H8 435 aa23.15■■□□□ 1.3
HOMER3-208ENST00000595756 ATP5J2-PTCD1G3V325 749 aa23.14■■□□□ 1.29
HOMER3-208ENST00000595756 LMOD1P29536 600 aaPredicted RBP23.14■■□□□ 1.29
HOMER3-208ENST00000595756 SCNN1DP51172 638 aa23.14■■□□□ 1.29
HOMER3-208ENST00000595756 CHMP4AQ9BY43 222 aa23.14■■□□□ 1.29
HOMER3-208ENST00000595756 COL4A1P02462 1669 aa23.13■■□□□ 1.29
HOMER3-208ENST00000595756 ITGBL1O95965 494 aaPredicted RBP23.13■■□□□ 1.29
HOMER3-208ENST00000595756 SF3B3Q15393 1217 aaKnown RBP23.13■■□□□ 1.29
HOMER3-208ENST00000595756 MPNDQ8N594 471 aa23.13■■□□□ 1.29
HOMER3-208ENST00000595756 FAM89AQ96GI7 184 aa23.13■■□□□ 1.29
HOMER3-208ENST00000595756 KIAA2012Q0VF49 1180 aa23.12■■□□□ 1.29
HOMER3-208ENST00000595756 CCDC27Q2M243 656 aa23.12■■□□□ 1.29
HOMER3-208ENST00000595756 RIC3Q7Z5B4 369 aa23.12■■□□□ 1.29
HOMER3-208ENST00000595756 C8orf58Q8NAV2 365 aa23.12■■□□□ 1.29
HOMER3-208ENST00000595756 CLEC11AQ9Y240 323 aa23.12■■□□□ 1.29
HOMER3-208ENST00000595756 CNTNAP1P78357 1384 aa23.12■■□□□ 1.29
HOMER3-208ENST00000595756 ELL2O00472 640 aaPredicted RBP23.11■■□□□ 1.29
HOMER3-208ENST00000595756 CCDC184Q52MB2 194 aa23.11■■□□□ 1.29
HOMER3-208ENST00000595756 ZNF428Q96B54 188 aa23.11■■□□□ 1.29
HOMER3-208ENST00000595756 PHAXQ9H814 394 aaKnown RBP23.11■■□□□ 1.29
HOMER3-208ENST00000595756 ZNRF3Q9ULT6 936 aa23.11■■□□□ 1.29
HOMER3-208ENST00000595756 CCDC30Q5VVM6 783 aa23.1■■□□□ 1.29
HOMER3-208ENST00000595756 CDHR2Q9BYE9 1310 aa23.09■■□□□ 1.29
HOMER3-208ENST00000595756 TMEM88BA6NKF7 163 aa23.09■■□□□ 1.29
HOMER3-208ENST00000595756 IRS4O14654 1257 aaPredicted RBP23.09■■□□□ 1.29
HOMER3-208ENST00000595756 ZBTB38Q8NAP3 1195 aaPredicted RBP23.09■■□□□ 1.29
HOMER3-208ENST00000595756 TRPM7Q96QT4 1865 aa23.09■■□□□ 1.29
HOMER3-208ENST00000595756 DDX58O95786 925 aaKnown RBP23.08■■□□□ 1.29
HOMER3-208ENST00000595756 HSP90B1P14625 803 aaKnown RBP23.08■■□□□ 1.29
HOMER3-208ENST00000595756 NCBP3Q53F19 620 aaKnown RBP23.08■■□□□ 1.29
HOMER3-208ENST00000595756 MAP1SQ66K74 1059 aaPredicted RBP23.08■■□□□ 1.29
HOMER3-208ENST00000595756 USP50Q70EL3 339 aaPredicted RBP23.08■■□□□ 1.29
HOMER3-208ENST00000595756 CNTROBQ8N137 903 aa23.08■■□□□ 1.29
HOMER3-208ENST00000595756 CELF1Q92879 486 aaKnown RBP23.08■■□□□ 1.29
HOMER3-208ENST00000595756 MYH3P11055 1940 aa23.08■■□□□ 1.28
HOMER3-208ENST00000595756 HSPA1AP0DMV8 641 aaKnown RBP23.07■■□□□ 1.28
HOMER3-208ENST00000595756 HSPA1BP0DMV9 641 aaKnown RBP23.07■■□□□ 1.28
HOMER3-208ENST00000595756 EPS15P42566 896 aa23.07■■□□□ 1.28
HOMER3-208ENST00000595756 CXCL9Q07325 125 aa23.07■■□□□ 1.28
HOMER3-208ENST00000595756 CCDC191Q8NCU4 936 aa23.07■■□□□ 1.28
HOMER3-208ENST00000595756 MYD88Q99836 296 aa23.07■■□□□ 1.28
HOMER3-208ENST00000595756 MKRN1Q9UHC7 482 aaKnown RBP23.07■■□□□ 1.28
HOMER3-208ENST00000595756 CCER2I3L3R5 266 aa23.06■■□□□ 1.28
HOMER3-208ENST00000595756 RTL5Q5HYW3 569 aaPredicted RBP23.06■■□□□ 1.28
HOMER3-208ENST00000595756 GPRC5DQ9NZD1 345 aa23.06■■□□□ 1.28
HOMER3-208ENST00000595756 IL16Q14005 1332 aa23.06■■□□□ 1.28
HOMER3-208ENST00000595756 PCCAP05165 728 aaPredicted RBP23.05■■□□□ 1.28
HOMER3-208ENST00000595756 CIAPIN1Q6FI81 312 aa23.05■■□□□ 1.28
HOMER3-208ENST00000595756 WWC1Q8IX03 1113 aa23.05■■□□□ 1.28
HOMER3-208ENST00000595756 TSPYL6Q8N831 410 aa23.05■■□□□ 1.28
HOMER3-208ENST00000595756 TSR2Q969E8 191 aaKnown RBP23.05■■□□□ 1.28
HOMER3-208ENST00000595756 METTL22Q9BUU2 404 aaPredicted RBP23.05■■□□□ 1.28
HOMER3-208ENST00000595756 ADARB2Q9NS39 739 aaKnown RBP23.05■■□□□ 1.28
HOMER3-208ENST00000595756 CACNA1FO60840 1977 aa23.05■■□□□ 1.28
HOMER3-208ENST00000595756 CWC25Q9NXE8 425 aaPredicted RBP23.04■■□□□ 1.28
HOMER3-208ENST00000595756 THSD7BQ9C0I4 1608 aa23.04■■□□□ 1.28
HOMER3-208ENST00000595756 GMPSP49915 693 aaPredicted RBP23.03■■□□□ 1.28
HOMER3-208ENST00000595756 TNIP1Q15025 636 aa23.03■■□□□ 1.28
HOMER3-208ENST00000595756 STK31Q9BXU1 1019 aa23.02■■□□□ 1.28
HOMER3-208ENST00000595756 RASSF10A6NK89 507 aa23.01■■□□□ 1.27
HOMER3-208ENST00000595756 YDJCA8MPS7 323 aa23.01■■□□□ 1.27
HOMER3-208ENST00000595756 RPS8P62241 208 aaKnown RBP23.01■■□□□ 1.27
HOMER3-208ENST00000595756 CCDC152Q4G0S7 254 aa23.01■■□□□ 1.27
HOMER3-208ENST00000595756 NSFL1CQ9UNZ2 370 aaKnown RBP23.01■■□□□ 1.27
HOMER3-208ENST00000595756 MAP3K2Q9Y2U5 619 aa23.01■■□□□ 1.27
HOMER3-208ENST00000595756 PDE8AO60658 829 aa23■■□□□ 1.27
HOMER3-208ENST00000595756 RAD17O75943 681 aa23■■□□□ 1.27
HOMER3-208ENST00000595756 GPSM2P81274 684 aa23■■□□□ 1.27
HOMER3-208ENST00000595756 WASHC4Q2M389 1173 aa23■■□□□ 1.27
HOMER3-208ENST00000595756 TWISTNBQ3B726 338 aaPredicted RBP23■■□□□ 1.27
HOMER3-208ENST00000595756 COL13A1Q5TAT6 717 aaPredicted RBP23■■□□□ 1.27
HOMER3-208ENST00000595756 KSR2Q6VAB6 950 aa23■■□□□ 1.27
HOMER3-208ENST00000595756 EYA3Q99504 573 aa23■■□□□ 1.27
HOMER3-208ENST00000595756 PSME4Q14997 1843 aa23■■□□□ 1.27
HOMER3-208ENST00000595756 SPEF2Q9C093 1822 aa22.99■■□□□ 1.27
HOMER3-208ENST00000595756 BCL2L13Q9BXK5 485 aa22.99■■□□□ 1.27
HOMER3-208ENST00000595756 PODXL2Q9NZ53 605 aa22.99■■□□□ 1.27
HOMER3-208ENST00000595756 POLLQ9UGP5 575 aa22.99■■□□□ 1.27
HOMER3-208ENST00000595756 PI4KAP2A4QPH2 592 aa22.98■■□□□ 1.27
HOMER3-208ENST00000595756 VEGFBP49765 207 aa22.98■■□□□ 1.27
HOMER3-208ENST00000595756 PI4KAP1Q8N8J0 262 aa22.98■■□□□ 1.27
HOMER3-208ENST00000595756 SEC31BQ9NQW1 1179 aa22.98■■□□□ 1.27
HOMER3-208ENST00000595756 SCN9AQ15858 1988 aa22.98■■□□□ 1.27
HOMER3-208ENST00000595756 C6orf229H3BNL8 230 aa22.97■■□□□ 1.27
HOMER3-208ENST00000595756 TBC1D16Q8TBP0 767 aa22.97■■□□□ 1.27
HOMER3-208ENST00000595756 FANCIQ9NVI1 1328 aa22.97■■□□□ 1.27
HOMER3-208ENST00000595756 IGKV5-2P06315 115 aa22.96■■□□□ 1.27
HOMER3-208ENST00000595756 NEXNQ0ZGT2 675 aa22.96■■□□□ 1.27
HOMER3-208ENST00000595756 DBNDD1Q9H9R9 158 aa22.96■■□□□ 1.27
HOMER3-208ENST00000595756 ECE2O60344 883 aa22.95■■□□□ 1.26
HOMER3-208ENST00000595756 DEFB115Q30KQ5 88 aa22.95■■□□□ 1.26
HOMER3-208ENST00000595756 FAM9BQ8IZU0 186 aa22.95■■□□□ 1.26
HOMER3-208ENST00000595756 ZC3H15Q8WU90 426 aaKnown RBP22.95■■□□□ 1.26
HOMER3-208ENST00000595756 PGAP2Q9UHJ9 254 aa22.95■■□□□ 1.26
HOMER3-208ENST00000595756 ABT1Q9ULW3 272 aaKnown RBP22.95■■□□□ 1.26
HOMER3-208ENST00000595756 ZNF609O15014 1411 aa22.94■■□□□ 1.26
HOMER3-208ENST00000595756 RTL9Q8NET4 1388 aa22.94■■□□□ 1.26
HOMER3-208ENST00000595756 CTSWP56202 376 aa22.94■■□□□ 1.26
HOMER3-208ENST00000595756 WDR63Q8IWG1 891 aa22.94■■□□□ 1.26
HOMER3-208ENST00000595756 DPF2Q92785 391 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms