RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 LRRC37AA6NMS7 1700 aa17.35■□□□□ 0.37
TMEM38A-202ENST00000595452 IGKV5-2P06315 115 aa17.34■□□□□ 0.37
TMEM38A-202ENST00000595452 PTPRCP08575 1304 aa17.34■□□□□ 0.37
TMEM38A-202ENST00000595452 IARSP41252 1262 aaKnown RBP17.34■□□□□ 0.37
TMEM38A-202ENST00000595452 HNRNPUQ00839 825 aaKnown RBP eCLIP17.34■□□□□ 0.37
TMEM38A-202ENST00000595452 CWF19L2Q2TBE0 894 aaKnown RBP17.34■□□□□ 0.37
TMEM38A-202ENST00000595452 ALDH1L2Q3SY69 923 aa17.34■□□□□ 0.37
TMEM38A-202ENST00000595452 SP8Q8IXZ3 490 aa17.34■□□□□ 0.37
TMEM38A-202ENST00000595452 TAF1P21675 1872 aa17.33■□□□□ 0.37
TMEM38A-202ENST00000595452 GLTPD2A6NH11 291 aa17.33■□□□□ 0.36
TMEM38A-202ENST00000595452 GCKRQ14397 625 aa17.33■□□□□ 0.36
TMEM38A-202ENST00000595452 DPP8Q6V1X1 898 aaPredicted RBP17.33■□□□□ 0.36
TMEM38A-202ENST00000595452 UBE3BQ7Z3V4 1068 aa17.33■□□□□ 0.36
TMEM38A-202ENST00000595452 VPS33BQ9H267 617 aa17.33■□□□□ 0.36
TMEM38A-202ENST00000595452 ZNF277Q9NRM2 450 aaPredicted RBP17.33■□□□□ 0.36
TMEM38A-202ENST00000595452 CTSWP56202 376 aa17.32■□□□□ 0.36
TMEM38A-202ENST00000595452 MPNDQ8N594 471 aa17.32■□□□□ 0.36
TMEM38A-202ENST00000595452 CDCA7LQ96GN5 454 aa17.32■□□□□ 0.36
TMEM38A-202ENST00000595452 CDC5LQ99459 802 aaKnown RBP17.32■□□□□ 0.36
TMEM38A-202ENST00000595452 SMC4Q9NTJ3 1288 aa17.32■□□□□ 0.36
TMEM38A-202ENST00000595452 C1QTNF8P60827 252 aa17.31■□□□□ 0.36
TMEM38A-202ENST00000595452 SLC4A10Q6U841 1118 aa17.31■□□□□ 0.36
TMEM38A-202ENST00000595452 OLFM4Q6UX06 510 aa17.31■□□□□ 0.36
TMEM38A-202ENST00000595452 LARGE2Q8N3Y3 721 aa17.31■□□□□ 0.36
TMEM38A-202ENST00000595452 SNED1Q8TER0 1413 aa17.3■□□□□ 0.36
TMEM38A-202ENST00000595452 ANKRD18AQ8IVF6 992 aa17.3■□□□□ 0.36
TMEM38A-202ENST00000595452 NIM1KQ8IY84 436 aa17.3■□□□□ 0.36
TMEM38A-202ENST00000595452 SRCIN1Q9C0H9 1055 aa17.3■□□□□ 0.36
TMEM38A-202ENST00000595452 WDR90Q96KV7 1748 aa17.3■□□□□ 0.36
TMEM38A-202ENST00000595452 F6X3S4 739 aa17.29■□□□□ 0.36
TMEM38A-202ENST00000595452 PPIP5K2O43314 1243 aa17.29■□□□□ 0.36
TMEM38A-202ENST00000595452 ALDH1L1O75891 902 aa17.29■□□□□ 0.36
TMEM38A-202ENST00000595452 VEGFAP15692 232 aaPredicted RBP17.29■□□□□ 0.36
TMEM38A-202ENST00000595452 PRELPP51888 382 aa17.29■□□□□ 0.36
TMEM38A-202ENST00000595452 EIF6P56537 245 aaKnown RBP17.29■□□□□ 0.36
TMEM38A-202ENST00000595452 RPS8P62241 208 aaKnown RBP17.29■□□□□ 0.36
TMEM38A-202ENST00000595452 TRMT2AQ8IZ69 625 aaKnown RBP17.29■□□□□ 0.36
TMEM38A-202ENST00000595452 MRPL50Q8N5N7 158 aaKnown RBP17.29■□□□□ 0.36
TMEM38A-202ENST00000595452 NMRK2Q9NPI5 230 aa17.29■□□□□ 0.36
TMEM38A-202ENST00000595452 C9orf78Q9NZ63 289 aaPredicted RBP17.29■□□□□ 0.36
TMEM38A-202ENST00000595452 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
TMEM38A-202ENST00000595452 SPEF2Q9C093 1822 aa17.28■□□□□ 0.36
TMEM38A-202ENST00000595452 H7C1W4 665 aa17.28■□□□□ 0.36
TMEM38A-202ENST00000595452 TOMM70O94826 608 aa17.28■□□□□ 0.36
TMEM38A-202ENST00000595452 BEND3Q5T5X7 828 aa17.28■□□□□ 0.36
TMEM38A-202ENST00000595452 SSH1Q8WYL5 1049 aa17.28■□□□□ 0.36
TMEM38A-202ENST00000595452 CELF1Q92879 486 aaKnown RBP17.28■□□□□ 0.36
TMEM38A-202ENST00000595452 SCN4AP35499 1836 aa17.28■□□□□ 0.36
TMEM38A-202ENST00000595452 KIF16BQ96L93 1317 aa17.27■□□□□ 0.36
TMEM38A-202ENST00000595452 IQCA1LA6NCM1 817 aa17.27■□□□□ 0.36
TMEM38A-202ENST00000595452 GRM8O00222 908 aa17.27■□□□□ 0.36
TMEM38A-202ENST00000595452 KIF3CO14782 793 aa17.27■□□□□ 0.36
TMEM38A-202ENST00000595452 JARID2Q92833 1246 aaPredicted RBP17.27■□□□□ 0.36
TMEM38A-202ENST00000595452 EYA3Q99504 573 aa17.27■□□□□ 0.36
TMEM38A-202ENST00000595452 PLA2G12BQ9BX93 195 aa17.27■□□□□ 0.36
TMEM38A-202ENST00000595452 BCL2L13Q9BXK5 485 aa17.27■□□□□ 0.36
TMEM38A-202ENST00000595452 RTFDC1Q9BY42 306 aaPredicted RBP17.27■□□□□ 0.36
TMEM38A-202ENST00000595452 NSFL1CQ9UNZ2 370 aaKnown RBP17.27■□□□□ 0.36
TMEM38A-202ENST00000595452 IGHMBP2P38935 993 aaKnown RBP17.26■□□□□ 0.35
TMEM38A-202ENST00000595452 TTLL11Q8NHH1 800 aa17.26■□□□□ 0.35
TMEM38A-202ENST00000595452 CCDC85AQ96PX6 553 aaPredicted RBP17.26■□□□□ 0.35
TMEM38A-202ENST00000595452 RRAGCQ9HB90 399 aa17.26■□□□□ 0.35
TMEM38A-202ENST00000595452 ANKIB1Q9P2G1 1089 aa17.26■□□□□ 0.35
TMEM38A-202ENST00000595452 AOC3Q16853 763 aa17.25■□□□□ 0.35
TMEM38A-202ENST00000595452 ZBED9Q6R2W3 1325 aa17.24■□□□□ 0.35
TMEM38A-202ENST00000595452 C6orf229H3BNL8 230 aa17.24■□□□□ 0.35
TMEM38A-202ENST00000595452 FZD9O00144 591 aa17.24■□□□□ 0.35
TMEM38A-202ENST00000595452 GPC2Q8N158 579 aa17.24■□□□□ 0.35
TMEM38A-202ENST00000595452 RBM46Q8TBY0 533 aaKnown RBP17.24■□□□□ 0.35
TMEM38A-202ENST00000595452 API5Q9BZZ5 524 aaKnown RBP17.24■□□□□ 0.35
TMEM38A-202ENST00000595452 SEC31BQ9NQW1 1179 aa17.24■□□□□ 0.35
TMEM38A-202ENST00000595452 CHMP3Q9Y3E7 222 aa17.24■□□□□ 0.35
TMEM38A-202ENST00000595452 XDHP47989 1333 aa17.23■□□□□ 0.35
TMEM38A-202ENST00000595452 G3V3G9 751 aa17.23■□□□□ 0.35
TMEM38A-202ENST00000595452 DDNO94850 711 aaPredicted RBP17.23■□□□□ 0.35
TMEM38A-202ENST00000595452 LMOD1P29536 600 aaPredicted RBP17.23■□□□□ 0.35
TMEM38A-202ENST00000595452 KIAA2012Q0VF49 1180 aa17.23■□□□□ 0.35
TMEM38A-202ENST00000595452 WASHC4Q2M389 1173 aa17.23■□□□□ 0.35
TMEM38A-202ENST00000595452 DCAF8Q5TAQ9 597 aa17.23■□□□□ 0.35
TMEM38A-202ENST00000595452 MPHOSPH8Q99549 860 aa17.23■□□□□ 0.35
TMEM38A-202ENST00000595452 GREM2Q9H772 168 aa17.23■□□□□ 0.35
TMEM38A-202ENST00000595452 LTBP1Q14766 1721 aa17.23■□□□□ 0.35
TMEM38A-202ENST00000595452 DUOX1Q9NRD9 1551 aa17.23■□□□□ 0.35
TMEM38A-202ENST00000595452 ANKRD18BA2A2Z9 1011 aa17.22■□□□□ 0.35
TMEM38A-202ENST00000595452 ITGA6P23229 1130 aa17.22■□□□□ 0.35
TMEM38A-202ENST00000595452 CCT4P50991 539 aaKnown RBP17.22■□□□□ 0.35
TMEM38A-202ENST00000595452 FSTL1Q12841 308 aa17.22■□□□□ 0.35
TMEM38A-202ENST00000595452 IFIT5Q13325 482 aaKnown RBP17.22■□□□□ 0.35
TMEM38A-202ENST00000595452 TAF7LQ5H9L4 462 aa17.22■□□□□ 0.35
TMEM38A-202ENST00000595452 SMC1BQ8NDV3 1235 aa17.22■□□□□ 0.35
TMEM38A-202ENST00000595452 L3MBTL3Q96JM7 780 aaPredicted RBP17.22■□□□□ 0.35
TMEM38A-202ENST00000595452 BSDC1Q9NW68 430 aaPredicted RBP17.22■□□□□ 0.35
TMEM38A-202ENST00000595452 PODXL2Q9NZ53 605 aa17.22■□□□□ 0.35
TMEM38A-202ENST00000595452 GGA1Q9UJY5 639 aa17.22■□□□□ 0.35
TMEM38A-202ENST00000595452 ZNRF3Q9ULT6 936 aa17.22■□□□□ 0.35
TMEM38A-202ENST00000595452 HDAC5Q9UQL6 1122 aa17.22■□□□□ 0.35
TMEM38A-202ENST00000595452 ZNF541Q9H0D2 1346 aa17.21■□□□□ 0.35
TMEM38A-202ENST00000595452 IPO8O15397 1037 aaKnown RBP17.21■□□□□ 0.35
TMEM38A-202ENST00000595452 UFL1O94874 794 aa17.21■□□□□ 0.35
TMEM38A-202ENST00000595452 BRPF1P55201 1214 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms