RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ADARB2Q9NS39 739 aaKnown RBP22.84■■□□□ 1.25
SHKBP1-203ENST00000594298 CHPF2Q9P2E5 772 aa22.84■■□□□ 1.25
SHKBP1-203ENST00000594298 ABT1Q9ULW3 272 aaKnown RBP22.84■■□□□ 1.25
SHKBP1-203ENST00000594298 ANKRD36CQ5JPF3 1778 aa22.84■■□□□ 1.25
SHKBP1-203ENST00000594298 KIAA2012Q0VF49 1180 aa22.83■■□□□ 1.25
SHKBP1-203ENST00000594298 TMC4Q7Z404 712 aa22.83■■□□□ 1.25
SHKBP1-203ENST00000594298 MPNDQ8N594 471 aa22.83■■□□□ 1.25
SHKBP1-203ENST00000594298 PLBD2Q8NHP8 589 aa22.83■■□□□ 1.25
SHKBP1-203ENST00000594298 WDR33Q9C0J8 1336 aaKnown RBP22.82■■□□□ 1.24
SHKBP1-203ENST00000594298 HDGFL1Q5TGJ6 251 aa22.82■■□□□ 1.24
SHKBP1-203ENST00000594298 LAS1LQ9Y4W2 734 aaKnown RBP22.82■■□□□ 1.24
SHKBP1-203ENST00000594298 CDHR2Q9BYE9 1310 aa22.82■■□□□ 1.24
SHKBP1-203ENST00000594298 DBF4Q9UBU7 674 aaPredicted RBP22.81■■□□□ 1.24
SHKBP1-203ENST00000594298 ADAMTS8Q9UP79 889 aa22.81■■□□□ 1.24
SHKBP1-203ENST00000594298 MAP2K1Q02750 393 aaPredicted RBP22.8■■□□□ 1.24
SHKBP1-203ENST00000594298 ANKRD13DQ6ZTN6 518 aa22.8■■□□□ 1.24
SHKBP1-203ENST00000594298 CFAP44Q96MT7 982 aa22.8■■□□□ 1.24
SHKBP1-203ENST00000594298 ISCA1Q9BUE6 129 aa22.8■■□□□ 1.24
SHKBP1-203ENST00000594298 LAMB2P55268 1798 aa22.79■■□□□ 1.24
SHKBP1-203ENST00000594298 GMPSP49915 693 aaPredicted RBP22.79■■□□□ 1.24
SHKBP1-203ENST00000594298 FMR1Q06787 632 aaKnown RBP eCLIP22.79■■□□□ 1.24
SHKBP1-203ENST00000594298 CST9Q5W186 159 aa22.79■■□□□ 1.24
SHKBP1-203ENST00000594298 CIAPIN1Q6FI81 312 aa22.79■■□□□ 1.24
SHKBP1-203ENST00000594298 TNIP1Q15025 636 aa22.78■■□□□ 1.24
SHKBP1-203ENST00000594298 SF3B3Q15393 1217 aaKnown RBP22.78■■□□□ 1.24
SHKBP1-203ENST00000594298 PGAP2Q9UHJ9 254 aa22.78■■□□□ 1.24
SHKBP1-203ENST00000594298 TRAF5O00463 557 aa22.77■■□□□ 1.24
SHKBP1-203ENST00000594298 ECE1P42892 770 aa22.77■■□□□ 1.24
SHKBP1-203ENST00000594298 HYPKQ9NX55 129 aa22.77■■□□□ 1.24
SHKBP1-203ENST00000594298 LBX1P52954 281 aa22.76■■□□□ 1.23
SHKBP1-203ENST00000594298 TRIM28Q13263 835 aaKnown RBP22.76■■□□□ 1.23
SHKBP1-203ENST00000594298 ZC3H15Q8WU90 426 aaKnown RBP22.76■■□□□ 1.23
SHKBP1-203ENST00000594298 TLL2Q9Y6L7 1015 aa22.76■■□□□ 1.23
SHKBP1-203ENST00000594298 DUOX1Q9NRD9 1551 aa22.76■■□□□ 1.23
SHKBP1-203ENST00000594298 HSPA8P11142 646 aaKnown RBP22.75■■□□□ 1.23
SHKBP1-203ENST00000594298 DUSP27Q5VZP5 1158 aa22.75■■□□□ 1.23
SHKBP1-203ENST00000594298 FAM89AQ96GI7 184 aa22.75■■□□□ 1.23
SHKBP1-203ENST00000594298 CAPNS2Q96L46 248 aa22.75■■□□□ 1.23
SHKBP1-203ENST00000594298 MRS2Q9HD23 443 aa22.75■■□□□ 1.23
SHKBP1-203ENST00000594298 THSD7BQ9C0I4 1608 aa22.75■■□□□ 1.23
SHKBP1-203ENST00000594298 LRRC37AA6NMS7 1700 aa22.74■■□□□ 1.23
SHKBP1-203ENST00000594298 YDJCA8MPS7 323 aa22.74■■□□□ 1.23
SHKBP1-203ENST00000594298 RAD17O75943 681 aa22.74■■□□□ 1.23
SHKBP1-203ENST00000594298 ZNF853P0CG23 659 aa22.74■■□□□ 1.23
SHKBP1-203ENST00000594298 BCL2L13Q9BXK5 485 aa22.74■■□□□ 1.23
SHKBP1-203ENST00000594298 MBIPQ9NS73 344 aa22.74■■□□□ 1.23
SHKBP1-203ENST00000594298 ATP5J2-PTCD1G3V325 749 aa22.73■■□□□ 1.23
SHKBP1-203ENST00000594298 CELF1Q92879 486 aaKnown RBP22.73■■□□□ 1.23
SHKBP1-203ENST00000594298 DDX60Q8IY21 1712 aaKnown RBP22.72■■□□□ 1.23
SHKBP1-203ENST00000594298 HIRAP54198 1017 aaPredicted RBP22.72■■□□□ 1.23
SHKBP1-203ENST00000594298 CYP4F22Q6NT55 531 aa22.72■■□□□ 1.23
SHKBP1-203ENST00000594298 ZNF428Q96B54 188 aa22.72■■□□□ 1.23
SHKBP1-203ENST00000594298 WASHC4Q2M389 1173 aa22.71■■□□□ 1.23
SHKBP1-203ENST00000594298 SAPCD2Q86UD0 394 aa22.71■■□□□ 1.23
SHKBP1-203ENST00000594298 HHIPL1Q96JK4 782 aa22.71■■□□□ 1.23
SHKBP1-203ENST00000594298 GPR101Q96P66 508 aaPredicted RBP22.71■■□□□ 1.23
SHKBP1-203ENST00000594298 CNOT7Q9UIV1 285 aaKnown RBP22.71■■□□□ 1.23
SHKBP1-203ENST00000594298 NSFL1CQ9UNZ2 370 aaKnown RBP22.71■■□□□ 1.23
SHKBP1-203ENST00000594298 CELF2O95319 508 aaKnown RBP22.7■■□□□ 1.22
SHKBP1-203ENST00000594298 CCDC184Q52MB2 194 aa22.7■■□□□ 1.22
SHKBP1-203ENST00000594298 PAXIP1Q6ZW49 1069 aaPredicted RBP22.7■■□□□ 1.22
SHKBP1-203ENST00000594298 TRPM4Q8TD43 1214 aa22.7■■□□□ 1.22
SHKBP1-203ENST00000594298 DPF2Q92785 391 aa22.7■■□□□ 1.22
SHKBP1-203ENST00000594298 GLIS2Q9BZE0 524 aaPredicted RBP22.7■■□□□ 1.22
SHKBP1-203ENST00000594298 IFT57Q9NWB7 429 aa22.7■■□□□ 1.22
SHKBP1-203ENST00000594298 H7C1D1 291 aa22.69■■□□□ 1.22
SHKBP1-203ENST00000594298 IRS4O14654 1257 aaPredicted RBP22.69■■□□□ 1.22
SHKBP1-203ENST00000594298 MAP2K2P36507 400 aa22.69■■□□□ 1.22
SHKBP1-203ENST00000594298 CDC37L1Q7L3B6 337 aa22.69■■□□□ 1.22
SHKBP1-203ENST00000594298 POLLQ9UGP5 575 aa22.69■■□□□ 1.22
SHKBP1-203ENST00000594298 TRPM7Q96QT4 1865 aa22.68■■□□□ 1.22
SHKBP1-203ENST00000594298 GPSM2P81274 684 aa22.68■■□□□ 1.22
SHKBP1-203ENST00000594298 CALD1Q05682 793 aaKnown RBP22.68■■□□□ 1.22
SHKBP1-203ENST00000594298 GOLGA2Q08379 1002 aa22.68■■□□□ 1.22
SHKBP1-203ENST00000594298 RIC3Q7Z5B4 369 aa22.68■■□□□ 1.22
SHKBP1-203ENST00000594298 MICALL2Q8IY33 904 aa22.68■■□□□ 1.22
SHKBP1-203ENST00000594298 ZBTB38Q8NAP3 1195 aaPredicted RBP22.68■■□□□ 1.22
SHKBP1-203ENST00000594298 BEGAINQ9BUH8 593 aa22.68■■□□□ 1.22
SHKBP1-203ENST00000594298 HSP90B1P14625 803 aaKnown RBP22.67■■□□□ 1.22
SHKBP1-203ENST00000594298 RPS8P62241 208 aaKnown RBP22.67■■□□□ 1.22
SHKBP1-203ENST00000594298 GNAI1P63096 354 aa22.67■■□□□ 1.22
SHKBP1-203ENST00000594298 RTL5Q5HYW3 569 aaPredicted RBP22.67■■□□□ 1.22
SHKBP1-203ENST00000594298 EYA3Q99504 573 aa22.67■■□□□ 1.22
SHKBP1-203ENST00000594298 ZBTB12Q9Y330 459 aaPredicted RBP22.67■■□□□ 1.22
SHKBP1-203ENST00000594298 TAF1P21675 1872 aa22.66■■□□□ 1.22
SHKBP1-203ENST00000594298 SHTN1A0MZ66 631 aa22.66■■□□□ 1.22
SHKBP1-203ENST00000594298 C6orf229H3BNL8 230 aa22.66■■□□□ 1.22
SHKBP1-203ENST00000594298 PSMD14O00487 310 aa22.66■■□□□ 1.22
SHKBP1-203ENST00000594298 APAF1O14727 1248 aa22.66■■□□□ 1.22
SHKBP1-203ENST00000594298 GRM1Q13255 1194 aa22.66■■□□□ 1.22
SHKBP1-203ENST00000594298 PHAXQ9H814 394 aaKnown RBP22.66■■□□□ 1.22
SHKBP1-203ENST00000594298 DBNDD1Q9H9R9 158 aa22.66■■□□□ 1.22
SHKBP1-203ENST00000594298 COL4A1P02462 1669 aa22.65■■□□□ 1.22
SHKBP1-203ENST00000594298 RPS12P25398 132 aaKnown RBP22.65■■□□□ 1.22
SHKBP1-203ENST00000594298 TBC1D16Q8TBP0 767 aa22.65■■□□□ 1.22
SHKBP1-203ENST00000594298 PODXL2Q9NZ53 605 aa22.65■■□□□ 1.22
SHKBP1-203ENST00000594298 RIMBP2O15034 1052 aa22.64■■□□□ 1.21
SHKBP1-203ENST00000594298 CCDC191Q8NCU4 936 aa22.64■■□□□ 1.21
SHKBP1-203ENST00000594298 ECE2O60344 883 aa22.63■■□□□ 1.21
SHKBP1-203ENST00000594298 AOC2O75106 756 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms