RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 CELF1Q92879 486 aaKnown RBP19.46■□□□□ 0.71
TRIM47-206ENST00000592942 PLA2G12BQ9BX93 195 aa19.46■□□□□ 0.71
TRIM47-206ENST00000592942 COL4A1P02462 1669 aa19.46■□□□□ 0.71
TRIM47-206ENST00000592942 PPEF1O14829 653 aaPredicted RBP19.45■□□□□ 0.7
TRIM47-206ENST00000592942 BCAR3O75815 825 aa19.45■□□□□ 0.7
TRIM47-206ENST00000592942 ALDH1L1O75891 902 aa19.45■□□□□ 0.7
TRIM47-206ENST00000592942 GRAPQ13588 217 aa19.45■□□□□ 0.7
TRIM47-206ENST00000592942 CCDC93Q567U6 631 aa19.45■□□□□ 0.7
TRIM47-206ENST00000592942 SOGA3Q5TF21 947 aa19.45■□□□□ 0.7
TRIM47-206ENST00000592942 TTLL11Q8NHH1 800 aa19.45■□□□□ 0.7
TRIM47-206ENST00000592942 GRAPLQ8TC17 118 aaPredicted RBP19.45■□□□□ 0.7
TRIM47-206ENST00000592942 SEC31BQ9NQW1 1179 aa19.45■□□□□ 0.7
TRIM47-206ENST00000592942 ATP6V0A2Q9Y487 856 aa19.45■□□□□ 0.7
TRIM47-206ENST00000592942 LTBP3Q9NS15 1303 aa19.45■□□□□ 0.7
TRIM47-206ENST00000592942 HSP90B1P14625 803 aaKnown RBP19.44■□□□□ 0.7
TRIM47-206ENST00000592942 SRCIN1Q9C0H9 1055 aa19.44■□□□□ 0.7
TRIM47-206ENST00000592942 CSF1RP07333 972 aa19.43■□□□□ 0.7
TRIM47-206ENST00000592942 LMNB1P20700 586 aa19.43■□□□□ 0.7
TRIM47-206ENST00000592942 CTSWP56202 376 aa19.43■□□□□ 0.7
TRIM47-206ENST00000592942 CC2D2BQ6DHV5 1058 aa19.43■□□□□ 0.7
TRIM47-206ENST00000592942 SP8Q8IXZ3 490 aa19.43■□□□□ 0.7
TRIM47-206ENST00000592942 RTKN2Q8IZC4 609 aa19.43■□□□□ 0.7
TRIM47-206ENST00000592942 GRM8O00222 908 aa19.42■□□□□ 0.7
TRIM47-206ENST00000592942 FOXO4P98177 505 aa19.42■□□□□ 0.7
TRIM47-206ENST00000592942 CCDC85AQ96PX6 553 aaPredicted RBP19.42■□□□□ 0.7
TRIM47-206ENST00000592942 TAOK3Q9H2K8 898 aa19.42■□□□□ 0.7
TRIM47-206ENST00000592942 RNF181Q9P0P0 153 aa19.42■□□□□ 0.7
TRIM47-206ENST00000592942 RPS8P62241 208 aaKnown RBP19.41■□□□□ 0.7
TRIM47-206ENST00000592942 FKBP4Q02790 459 aaKnown RBP eCLIP19.41■□□□□ 0.7
TRIM47-206ENST00000592942 CCDC152Q4G0S7 254 aa19.41■□□□□ 0.7
TRIM47-206ENST00000592942 EPHA10Q5JZY3 1008 aa19.41■□□□□ 0.7
TRIM47-206ENST00000592942 ARHGAP45Q92619 1136 aa19.41■□□□□ 0.7
TRIM47-206ENST00000592942 KAZALD1Q96I82 304 aa19.41■□□□□ 0.7
TRIM47-206ENST00000592942 UTYO14607 1347 aa19.41■□□□□ 0.7
TRIM47-206ENST00000592942 CCDC88AQ3V6T2 1871 aa19.41■□□□□ 0.7
TRIM47-206ENST00000592942 NBPF7P0C2Y1 421 aaPredicted RBP19.4■□□□□ 0.7
TRIM47-206ENST00000592942 PSMD1Q99460 953 aa19.4■□□□□ 0.7
TRIM47-206ENST00000592942 USP44Q9H0E7 712 aa19.4■□□□□ 0.7
TRIM47-206ENST00000592942 GREM2Q9H772 168 aa19.4■□□□□ 0.7
TRIM47-206ENST00000592942 GRIPAP1Q4V328 841 aa19.39■□□□□ 0.69
TRIM47-206ENST00000592942 TNNQ9UQP3 1299 aa19.39■□□□□ 0.69
TRIM47-206ENST00000592942 TMC4Q7Z404 712 aa19.38■□□□□ 0.69
TRIM47-206ENST00000592942 RTL9Q8NET4 1388 aa19.38■□□□□ 0.69
TRIM47-206ENST00000592942 API5Q9BZZ5 524 aaKnown RBP19.38■□□□□ 0.69
TRIM47-206ENST00000592942 ZNF277Q9NRM2 450 aaPredicted RBP19.38■□□□□ 0.69
TRIM47-206ENST00000592942 C9orf78Q9NZ63 289 aaPredicted RBP19.38■□□□□ 0.69
TRIM47-206ENST00000592942 SUCLG2Q96I99 432 aa19.37■□□□□ 0.69
TRIM47-206ENST00000592942 RTFDC1Q9BY42 306 aaPredicted RBP19.37■□□□□ 0.69
TRIM47-206ENST00000592942 KIF16BQ96L93 1317 aa19.36■□□□□ 0.69
TRIM47-206ENST00000592942 TRIM27P14373 513 aa19.36■□□□□ 0.69
TRIM47-206ENST00000592942 MYH3P11055 1940 aa19.35■□□□□ 0.69
TRIM47-206ENST00000592942 CCT4P50991 539 aaKnown RBP19.35■□□□□ 0.69
TRIM47-206ENST00000592942 FAM161AQ3B820 660 aa19.35■□□□□ 0.69
TRIM47-206ENST00000592942 INTS3Q68E01 1043 aaKnown RBP19.35■□□□□ 0.69
TRIM47-206ENST00000592942 MPNDQ8N594 471 aa19.35■□□□□ 0.69
TRIM47-206ENST00000592942 DICER1Q9UPY3 1922 aaKnown RBP19.34■□□□□ 0.69
TRIM47-206ENST00000592942 ITGA6P23229 1130 aa19.34■□□□□ 0.69
TRIM47-206ENST00000592942 IARSP41252 1262 aaKnown RBP19.34■□□□□ 0.69
TRIM47-206ENST00000592942 GPSM2P81274 684 aa19.34■□□□□ 0.69
TRIM47-206ENST00000592942 LMBR1LQ6UX01 489 aa19.34■□□□□ 0.69
TRIM47-206ENST00000592942 ATF7IPQ6VMQ6 1270 aa19.34■□□□□ 0.69
TRIM47-206ENST00000592942 ANKRD18AQ8IVF6 992 aa19.34■□□□□ 0.69
TRIM47-206ENST00000592942 FRAT1Q92837 279 aaPredicted RBP19.34■□□□□ 0.69
TRIM47-206ENST00000592942 ZC3H4Q9UPT8 1303 aaKnown RBP19.33■□□□□ 0.69
TRIM47-206ENST00000592942 IPO8O15397 1037 aaKnown RBP19.33■□□□□ 0.68
TRIM47-206ENST00000592942 DPP8Q6V1X1 898 aaPredicted RBP19.33■□□□□ 0.68
TRIM47-206ENST00000592942 CDC5LQ99459 802 aaKnown RBP19.33■□□□□ 0.68
TRIM47-206ENST00000592942 BSDC1Q9NW68 430 aaPredicted RBP19.33■□□□□ 0.68
TRIM47-206ENST00000592942 POLLQ9UGP5 575 aa19.33■□□□□ 0.68
TRIM47-206ENST00000592942 LRRC37AA6NMS7 1700 aa19.33■□□□□ 0.68
TRIM47-206ENST00000592942 COL4A5P29400 1685 aa19.33■□□□□ 0.68
TRIM47-206ENST00000592942 RABL6Q3YEC7 729 aaPredicted RBP19.32■□□□□ 0.68
TRIM47-206ENST00000592942 ZNF526Q8TF50 670 aaPredicted RBP19.32■□□□□ 0.68
TRIM47-206ENST00000592942 TMX4Q9H1E5 349 aaPredicted RBP19.32■□□□□ 0.68
TRIM47-206ENST00000592942 PODXL2Q9NZ53 605 aa19.32■□□□□ 0.68
TRIM47-206ENST00000592942 NSFL1CQ9UNZ2 370 aaKnown RBP19.32■□□□□ 0.68
TRIM47-206ENST00000592942 WTIPA6NIX2 430 aaPredicted RBP19.31■□□□□ 0.68
TRIM47-206ENST00000592942 FZD9O00144 591 aa19.31■□□□□ 0.68
TRIM47-206ENST00000592942 ZKSCAN2Q63HK3 967 aa19.31■□□□□ 0.68
TRIM47-206ENST00000592942 ANKRD44Q8N8A2 993 aa19.31■□□□□ 0.68
TRIM47-206ENST00000592942 VPS33BQ9H267 617 aa19.31■□□□□ 0.68
TRIM47-206ENST00000592942 BICC1Q9H694 974 aaKnown RBP19.31■□□□□ 0.68
TRIM47-206ENST00000592942 MINPP1Q9UNW1 487 aa19.31■□□□□ 0.68
TRIM47-206ENST00000592942 DUOX1Q9NRD9 1551 aa19.31■□□□□ 0.68
TRIM47-206ENST00000592942 GLTPD2A6NH11 291 aa19.3■□□□□ 0.68
TRIM47-206ENST00000592942 CLUAP1Q96AJ1 413 aa19.3■□□□□ 0.68
TRIM47-206ENST00000592942 ANKRD18BA2A2Z9 1011 aa19.29■□□□□ 0.68
TRIM47-206ENST00000592942 IFIT5Q13325 482 aaKnown RBP19.29■□□□□ 0.68
TRIM47-206ENST00000592942 AOC3Q16853 763 aa19.29■□□□□ 0.68
TRIM47-206ENST00000592942 SUPT20HQ8NEM7 779 aa19.29■□□□□ 0.68
TRIM47-206ENST00000592942 TBC1D16Q8TBP0 767 aa19.29■□□□□ 0.68
TRIM47-206ENST00000592942 ZNF594Q96JF6 807 aaPredicted RBP19.29■□□□□ 0.68
TRIM47-206ENST00000592942 GPBP1L1Q9HC44 474 aaPredicted RBP19.29■□□□□ 0.68
TRIM47-206ENST00000592942 LTBP1Q14766 1721 aa19.28■□□□□ 0.68
TRIM47-206ENST00000592942 POTECB2RU33 542 aa19.28■□□□□ 0.68
TRIM47-206ENST00000592942 KIAA2012Q0VF49 1180 aa19.28■□□□□ 0.68
TRIM47-206ENST00000592942 MEIS3Q99687 375 aa19.28■□□□□ 0.68
TRIM47-206ENST00000592942 KIF3CO14782 793 aa19.27■□□□□ 0.68
TRIM47-206ENST00000592942 PPIP5K2O43314 1243 aa19.27■□□□□ 0.68
TRIM47-206ENST00000592942 RLBP1P12271 317 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms