RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 CDHR2Q9BYE9 1310 aa17.17■□□□□ 0.34
APOC1-209ENST00000592885 CNTNAP1P78357 1384 aa17.16■□□□□ 0.34
APOC1-209ENST00000592885 TAF1P21675 1872 aa17.16■□□□□ 0.34
APOC1-209ENST00000592885 ITGBL1O95965 494 aaPredicted RBP17.16■□□□□ 0.34
APOC1-209ENST00000592885 SCNN1DP51172 638 aa17.16■□□□□ 0.34
APOC1-209ENST00000592885 KIAA2012Q0VF49 1180 aa17.16■□□□□ 0.34
APOC1-209ENST00000592885 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
APOC1-209ENST00000592885 RIC3Q7Z5B4 369 aa17.16■□□□□ 0.34
APOC1-209ENST00000592885 SLC51AQ86UW1 340 aa17.16■□□□□ 0.34
APOC1-209ENST00000592885 ZNRF3Q9ULT6 936 aa17.16■□□□□ 0.34
APOC1-209ENST00000592885 CLEC11AQ9Y240 323 aa17.16■□□□□ 0.34
APOC1-209ENST00000592885 TMEM88BA6NKF7 163 aa17.15■□□□□ 0.34
APOC1-209ENST00000592885 ATP5J2-PTCD1G3V325 749 aa17.15■□□□□ 0.34
APOC1-209ENST00000592885 CCDC30Q5VVM6 783 aa17.15■□□□□ 0.34
APOC1-209ENST00000592885 USP50Q70EL3 339 aaPredicted RBP17.15■□□□□ 0.34
APOC1-209ENST00000592885 FAM89AQ96GI7 184 aa17.15■□□□□ 0.34
APOC1-209ENST00000592885 DDX58O95786 925 aaKnown RBP17.14■□□□□ 0.33
APOC1-209ENST00000592885 ZBTB38Q8NAP3 1195 aaPredicted RBP17.14■□□□□ 0.33
APOC1-209ENST00000592885 IRS4O14654 1257 aaPredicted RBP17.13■□□□□ 0.33
APOC1-209ENST00000592885 CNTROBQ8N137 903 aa17.13■□□□□ 0.33
APOC1-209ENST00000592885 C8orf58Q8NAV2 365 aa17.13■□□□□ 0.33
APOC1-209ENST00000592885 CCDC191Q8NCU4 936 aa17.13■□□□□ 0.33
APOC1-209ENST00000592885 PHAXQ9H814 394 aaKnown RBP17.13■□□□□ 0.33
APOC1-209ENST00000592885 HSPA1AP0DMV8 641 aaKnown RBP17.12■□□□□ 0.33
APOC1-209ENST00000592885 HSPA1BP0DMV9 641 aaKnown RBP17.12■□□□□ 0.33
APOC1-209ENST00000592885 TNIP1Q15025 636 aa17.12■□□□□ 0.33
APOC1-209ENST00000592885 GPRC5DQ9NZD1 345 aa17.12■□□□□ 0.33
APOC1-209ENST00000592885 MKRN1Q9UHC7 482 aaKnown RBP17.12■□□□□ 0.33
APOC1-209ENST00000592885 IL16Q14005 1332 aa17.12■□□□□ 0.33
APOC1-209ENST00000592885 TRPM7Q96QT4 1865 aa17.12■□□□□ 0.33
APOC1-209ENST00000592885 ELL2O00472 640 aaPredicted RBP17.11■□□□□ 0.33
APOC1-209ENST00000592885 PCCAP05165 728 aaPredicted RBP17.11■□□□□ 0.33
APOC1-209ENST00000592885 EPS15P42566 896 aa17.11■□□□□ 0.33
APOC1-209ENST00000592885 CXCL9Q07325 125 aa17.11■□□□□ 0.33
APOC1-209ENST00000592885 MAP1SQ66K74 1059 aaPredicted RBP17.11■□□□□ 0.33
APOC1-209ENST00000592885 CIAPIN1Q6FI81 312 aa17.11■□□□□ 0.33
APOC1-209ENST00000592885 CELF1Q92879 486 aaKnown RBP17.11■□□□□ 0.33
APOC1-209ENST00000592885 MYD88Q99836 296 aa17.11■□□□□ 0.33
APOC1-209ENST00000592885 ADARB2Q9NS39 739 aaKnown RBP17.11■□□□□ 0.33
APOC1-209ENST00000592885 WWC1Q8IX03 1113 aa17.1■□□□□ 0.33
APOC1-209ENST00000592885 METTL22Q9BUU2 404 aaPredicted RBP17.1■□□□□ 0.33
APOC1-209ENST00000592885 CWC25Q9NXE8 425 aaPredicted RBP17.1■□□□□ 0.33
APOC1-209ENST00000592885 COL4A1P02462 1669 aa17.1■□□□□ 0.33
APOC1-209ENST00000592885 MYH3P11055 1940 aa17.09■□□□□ 0.33
APOC1-209ENST00000592885 CACNA1FO60840 1977 aa17.09■□□□□ 0.33
APOC1-209ENST00000592885 RASSF10A6NK89 507 aa17.09■□□□□ 0.33
APOC1-209ENST00000592885 CCDC184Q52MB2 194 aa17.09■□□□□ 0.33
APOC1-209ENST00000592885 EYA3Q99504 573 aa17.09■□□□□ 0.33
APOC1-209ENST00000592885 STK31Q9BXU1 1019 aa17.09■□□□□ 0.33
APOC1-209ENST00000592885 THSD7BQ9C0I4 1608 aa17.09■□□□□ 0.33
APOC1-209ENST00000592885 ANP32CO43423 234 aa17.08■□□□□ 0.32
APOC1-209ENST00000592885 PDE8AO60658 829 aa17.08■□□□□ 0.32
APOC1-209ENST00000592885 GMPSP49915 693 aaPredicted RBP17.08■□□□□ 0.32
APOC1-209ENST00000592885 RPS8P62241 208 aaKnown RBP17.08■□□□□ 0.32
APOC1-209ENST00000592885 WASHC4Q2M389 1173 aa17.08■□□□□ 0.32
APOC1-209ENST00000592885 CCDC152Q4G0S7 254 aa17.08■□□□□ 0.32
APOC1-209ENST00000592885 RTL5Q5HYW3 569 aaPredicted RBP17.08■□□□□ 0.32
APOC1-209ENST00000592885 TSPYL6Q8N831 410 aa17.08■□□□□ 0.32
APOC1-209ENST00000592885 KSR2Q6VAB6 950 aa17.07■□□□□ 0.32
APOC1-209ENST00000592885 TSR2Q969E8 191 aaKnown RBP17.07■□□□□ 0.32
APOC1-209ENST00000592885 ZNF428Q96B54 188 aa17.07■□□□□ 0.32
APOC1-209ENST00000592885 BCL2L13Q9BXK5 485 aa17.07■□□□□ 0.32
APOC1-209ENST00000592885 MRS2Q9HD23 443 aa17.07■□□□□ 0.32
APOC1-209ENST00000592885 PODXL2Q9NZ53 605 aa17.07■□□□□ 0.32
APOC1-209ENST00000592885 NSFL1CQ9UNZ2 370 aaKnown RBP17.07■□□□□ 0.32
APOC1-209ENST00000592885 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
APOC1-209ENST00000592885 YDJCA8MPS7 323 aa17.06■□□□□ 0.32
APOC1-209ENST00000592885 GPSM2P81274 684 aa17.06■□□□□ 0.32
APOC1-209ENST00000592885 NEXNQ0ZGT2 675 aa17.06■□□□□ 0.32
APOC1-209ENST00000592885 TWISTNBQ3B726 338 aaPredicted RBP17.06■□□□□ 0.32
APOC1-209ENST00000592885 COL13A1Q5TAT6 717 aaPredicted RBP17.06■□□□□ 0.32
APOC1-209ENST00000592885 ZC3H15Q8WU90 426 aaKnown RBP17.06■□□□□ 0.32
APOC1-209ENST00000592885 MAP3K2Q9Y2U5 619 aa17.06■□□□□ 0.32
APOC1-209ENST00000592885 PSME4Q14997 1843 aa17.05■□□□□ 0.32
APOC1-209ENST00000592885 RAD17O75943 681 aa17.05■□□□□ 0.32
APOC1-209ENST00000592885 VEGFBP49765 207 aa17.05■□□□□ 0.32
APOC1-209ENST00000592885 DPF2Q92785 391 aa17.05■□□□□ 0.32
APOC1-209ENST00000592885 POLLQ9UGP5 575 aa17.05■□□□□ 0.32
APOC1-209ENST00000592885 PGAP2Q9UHJ9 254 aa17.05■□□□□ 0.32
APOC1-209ENST00000592885 ZNF609O15014 1411 aa17.04■□□□□ 0.32
APOC1-209ENST00000592885 PCNTO95613 3336 aa17.04■□□□□ 0.32
APOC1-209ENST00000592885 PI4KAP2A4QPH2 592 aa17.04■□□□□ 0.32
APOC1-209ENST00000592885 C6orf229H3BNL8 230 aa17.04■□□□□ 0.32
APOC1-209ENST00000592885 RPS12P25398 132 aaKnown RBP17.04■□□□□ 0.32
APOC1-209ENST00000592885 DEFB115Q30KQ5 88 aa17.04■□□□□ 0.32
APOC1-209ENST00000592885 PI4KAP1Q8N8J0 262 aa17.04■□□□□ 0.32
APOC1-209ENST00000592885 TBC1D16Q8TBP0 767 aa17.04■□□□□ 0.32
APOC1-209ENST00000592885 ABT1Q9ULW3 272 aaKnown RBP17.04■□□□□ 0.32
APOC1-209ENST00000592885 RTL9Q8NET4 1388 aa17.03■□□□□ 0.32
APOC1-209ENST00000592885 H7C1D1 291 aa17.03■□□□□ 0.32
APOC1-209ENST00000592885 WDR63Q8IWG1 891 aa17.03■□□□□ 0.32
APOC1-209ENST00000592885 SEC31BQ9NQW1 1179 aa17.03■□□□□ 0.32
APOC1-209ENST00000592885 FANCIQ9NVI1 1328 aa17.02■□□□□ 0.32
APOC1-209ENST00000592885 ECE2O60344 883 aa17.02■□□□□ 0.32
APOC1-209ENST00000592885 IGKV5-2P06315 115 aa17.02■□□□□ 0.32
APOC1-209ENST00000592885 CTSWP56202 376 aa17.02■□□□□ 0.32
APOC1-209ENST00000592885 ANKRD18AQ8IVF6 992 aa17.02■□□□□ 0.32
APOC1-209ENST00000592885 AIDAQ96BJ3 306 aa17.02■□□□□ 0.32
APOC1-209ENST00000592885 CDC5LQ99459 802 aaKnown RBP17.02■□□□□ 0.32
APOC1-209ENST00000592885 DBNDD1Q9H9R9 158 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms