RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 FOXO4P98177 505 aa15.07■□□□□ 0
H3F3B-212ENST00000592643 C9orf131Q5VYM1 1079 aa15.07■□□□□ 0
H3F3B-212ENST00000592643 TTLL11Q8NHH1 800 aa15.07■□□□□ 0
H3F3B-212ENST00000592643 CCDC85AQ96PX6 553 aaPredicted RBP15.07■□□□□ 0
H3F3B-212ENST00000592643 PLA2G12BQ9BX93 195 aa15.07■□□□□ 0
H3F3B-212ENST00000592643 TAF1P21675 1872 aa15.06■□□□□ 0
H3F3B-212ENST00000592643 PPEF1O14829 653 aaPredicted RBP15.06■□□□□ 0
H3F3B-212ENST00000592643 ALDH1L1O75891 902 aa15.06■□□□□ 0
H3F3B-212ENST00000592643 CSF1RP07333 972 aa15.06■□□□□ 0
H3F3B-212ENST00000592643 NBPF7P0C2Y1 421 aaPredicted RBP15.06■□□□□ 0
H3F3B-212ENST00000592643 CTSWP56202 376 aa15.06■□□□□ 0
H3F3B-212ENST00000592643 GRAPQ13588 217 aa15.06■□□□□ 0
H3F3B-212ENST00000592643 GRAPLQ8TC17 118 aaPredicted RBP15.06■□□□□ 0
H3F3B-212ENST00000592643 SRCIN1Q9C0H9 1055 aa15.06■□□□□ 0
H3F3B-212ENST00000592643 UTYO14607 1347 aa15.06■□□□□ 0
H3F3B-212ENST00000592643 LTBP3Q9NS15 1303 aa15.06■□□□□ 0
H3F3B-212ENST00000592643 GRM8O00222 908 aa15.05■□□□□ -0
H3F3B-212ENST00000592643 CCDC93Q567U6 631 aa15.05■□□□□ -0
H3F3B-212ENST00000592643 ZNF784Q8NCA9 323 aaPredicted RBP15.05■□□□□ -0
H3F3B-212ENST00000592643 USP44Q9H0E7 712 aa15.05■□□□□ -0
H3F3B-212ENST00000592643 GREM2Q9H772 168 aa15.05■□□□□ -0
H3F3B-212ENST00000592643 ATP6V0A2Q9Y487 856 aa15.05■□□□□ -0
H3F3B-212ENST00000592643 COL4A5P29400 1685 aa15.05■□□□□ -0
H3F3B-212ENST00000592643 CACNA1SQ13698 1873 aa15.05■□□□□ -0
H3F3B-212ENST00000592643 FER1L6Q2WGJ9 1857 aa15.05■□□□□ -0
H3F3B-212ENST00000592643 BBOX1O75936 387 aa15.04■□□□□ -0
H3F3B-212ENST00000592643 TRIM27P14373 513 aa15.04■□□□□ -0
H3F3B-212ENST00000592643 DDX46Q7L014 1031 aaKnown RBP15.04■□□□□ -0
H3F3B-212ENST00000592643 CHD4Q14839 1912 aa15.04■□□□□ -0
H3F3B-212ENST00000592643 DUOX1Q9NRD9 1551 aa15.03■□□□□ -0
H3F3B-212ENST00000592643 RTL9Q8NET4 1388 aa15.03■□□□□ -0
H3F3B-212ENST00000592643 LMNB1P20700 586 aa15.03■□□□□ -0
H3F3B-212ENST00000592643 ARHGAP45Q92619 1136 aa15.03■□□□□ -0
H3F3B-212ENST00000592643 SUCLG2Q96I99 432 aa15.03■□□□□ -0
H3F3B-212ENST00000592643 TAOK3Q9H2K8 898 aa15.03■□□□□ -0
H3F3B-212ENST00000592643 ZNF277Q9NRM2 450 aaPredicted RBP15.03■□□□□ -0
H3F3B-212ENST00000592643 RNF181Q9P0P0 153 aa15.03■□□□□ -0
H3F3B-212ENST00000592643 SBF1O95248 1867 aa15.02■□□□□ -0
H3F3B-212ENST00000592643 WTIPA6NIX2 430 aaPredicted RBP15.02■□□□□ -0
H3F3B-212ENST00000592643 RPS8P62241 208 aaKnown RBP15.02■□□□□ -0
H3F3B-212ENST00000592643 FKBP4Q02790 459 aaKnown RBP eCLIP15.02■□□□□ -0
H3F3B-212ENST00000592643 FAM161AQ3B820 660 aa15.02■□□□□ -0
H3F3B-212ENST00000592643 CCDC152Q4G0S7 254 aa15.02■□□□□ -0
H3F3B-212ENST00000592643 SP8Q8IXZ3 490 aa15.02■□□□□ -0
H3F3B-212ENST00000592643 LRRC37AA6NMS7 1700 aa15.01□□□□□ -0.01
H3F3B-212ENST00000592643 KIF16BQ96L93 1317 aa15.01□□□□□ -0.01
H3F3B-212ENST00000592643 SOGA3Q5TF21 947 aa15.01□□□□□ -0.01
H3F3B-212ENST00000592643 INTS3Q68E01 1043 aaKnown RBP15.01□□□□□ -0.01
H3F3B-212ENST00000592643 RTKN2Q8IZC4 609 aa15.01□□□□□ -0.01
H3F3B-212ENST00000592643 ANKRD44Q8N8A2 993 aa15.01□□□□□ -0.01
H3F3B-212ENST00000592643 PSMD1Q99460 953 aa15.01□□□□□ -0.01
H3F3B-212ENST00000592643 RTFDC1Q9BY42 306 aaPredicted RBP15.01□□□□□ -0.01
H3F3B-212ENST00000592643 API5Q9BZZ5 524 aaKnown RBP15.01□□□□□ -0.01
H3F3B-212ENST00000592643 LTBP1Q14766 1721 aa15□□□□□ -0.01
H3F3B-212ENST00000592643 RLBP1P12271 317 aa15□□□□□ -0.01
H3F3B-212ENST00000592643 GPSM2P81274 684 aa15□□□□□ -0.01
H3F3B-212ENST00000592643 CC2D2BQ6DHV5 1058 aa15□□□□□ -0.01
H3F3B-212ENST00000592643 ATF7IPQ6VMQ6 1270 aa15□□□□□ -0.01
H3F3B-212ENST00000592643 HSP90B1P14625 803 aaKnown RBP14.99□□□□□ -0.01
H3F3B-212ENST00000592643 ITGA6P23229 1130 aa14.99□□□□□ -0.01
H3F3B-212ENST00000592643 RABL6Q3YEC7 729 aaPredicted RBP14.99□□□□□ -0.01
H3F3B-212ENST00000592643 LMBR1LQ6UX01 489 aa14.99□□□□□ -0.01
H3F3B-212ENST00000592643 FRAT1Q92837 279 aaPredicted RBP14.99□□□□□ -0.01
H3F3B-212ENST00000592643 C9orf78Q9NZ63 289 aaPredicted RBP14.99□□□□□ -0.01
H3F3B-212ENST00000592643 CCT4P50991 539 aaKnown RBP14.98□□□□□ -0.01
H3F3B-212ENST00000592643 CLUAP1Q96AJ1 413 aa14.98□□□□□ -0.01
H3F3B-212ENST00000592643 YTHDC1Q96MU7 727 aaKnown RBP14.98□□□□□ -0.01
H3F3B-212ENST00000592643 MEIS3Q99687 375 aa14.98□□□□□ -0.01
H3F3B-212ENST00000592643 BICC1Q9H694 974 aaKnown RBP14.98□□□□□ -0.01
H3F3B-212ENST00000592643 POLLQ9UGP5 575 aa14.98□□□□□ -0.01
H3F3B-212ENST00000592643 IARSP41252 1262 aaKnown RBP14.97□□□□□ -0.01
H3F3B-212ENST00000592643 TMC4Q7Z404 712 aa14.97□□□□□ -0.01
H3F3B-212ENST00000592643 GPR101Q96P66 508 aaPredicted RBP14.97□□□□□ -0.01
H3F3B-212ENST00000592643 DPP8Q6V1X1 898 aaPredicted RBP14.96□□□□□ -0.01
H3F3B-212ENST00000592643 ANKRD18AQ8IVF6 992 aa14.96□□□□□ -0.01
H3F3B-212ENST00000592643 MPNDQ8N594 471 aa14.96□□□□□ -0.01
H3F3B-212ENST00000592643 TMEM57Q8N5G2 664 aa14.96□□□□□ -0.01
H3F3B-212ENST00000592643 ZNF526Q8TF50 670 aaPredicted RBP14.96□□□□□ -0.01
H3F3B-212ENST00000592643 ZNF594Q96JF6 807 aaPredicted RBP14.96□□□□□ -0.01
H3F3B-212ENST00000592643 BSDC1Q9NW68 430 aaPredicted RBP14.96□□□□□ -0.01
H3F3B-212ENST00000592643 PODXL2Q9NZ53 605 aa14.96□□□□□ -0.01
H3F3B-212ENST00000592643 MINPP1Q9UNW1 487 aa14.96□□□□□ -0.01
H3F3B-212ENST00000592643 ZNF541Q9H0D2 1346 aa14.95□□□□□ -0.02
H3F3B-212ENST00000592643 POTECB2RU33 542 aa14.95□□□□□ -0.02
H3F3B-212ENST00000592643 FZD9O00144 591 aa14.95□□□□□ -0.02
H3F3B-212ENST00000592643 IPO8O15397 1037 aaKnown RBP14.95□□□□□ -0.02
H3F3B-212ENST00000592643 AOC3Q16853 763 aa14.95□□□□□ -0.02
H3F3B-212ENST00000592643 GRIPAP1Q4V328 841 aa14.95□□□□□ -0.02
H3F3B-212ENST00000592643 ZKSCAN2Q63HK3 967 aa14.95□□□□□ -0.02
H3F3B-212ENST00000592643 TBC1D16Q8TBP0 767 aa14.95□□□□□ -0.02
H3F3B-212ENST00000592643 NSFL1CQ9UNZ2 370 aaKnown RBP14.95□□□□□ -0.02
H3F3B-212ENST00000592643 ZC3H4Q9UPT8 1303 aaKnown RBP14.94□□□□□ -0.02
H3F3B-212ENST00000592643 MYH3P11055 1940 aa14.94□□□□□ -0.02
H3F3B-212ENST00000592643 RFX5P48382 616 aaPredicted RBP14.94□□□□□ -0.02
H3F3B-212ENST00000592643 CDC5LQ99459 802 aaKnown RBP14.94□□□□□ -0.02
H3F3B-212ENST00000592643 NMRK2Q9NPI5 230 aa14.94□□□□□ -0.02
H3F3B-212ENST00000592643 RCAN3Q9UKA8 241 aa14.94□□□□□ -0.02
H3F3B-212ENST00000592643 TIAM2Q8IVF5 1701 aa14.94□□□□□ -0.02
H3F3B-212ENST00000592643 SNAP23O00161 211 aa14.93□□□□□ -0.02
H3F3B-212ENST00000592643 PLIN1O60240 522 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 217.6 ms