RNA–Protein interactions for RNA: ENST00000592632.5

DDX39A-218, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-218ENST00000592632 UBE3BQ7Z3V4 1068 aa16.52■□□□□ 0.24
DDX39A-218ENST00000592632 PTPRCP08575 1304 aa16.51■□□□□ 0.23
DDX39A-218ENST00000592632 LMNB1P20700 586 aa16.51■□□□□ 0.23
DDX39A-218ENST00000592632 CCDC93Q567U6 631 aa16.51■□□□□ 0.23
DDX39A-218ENST00000592632 SLC4A10Q6U841 1118 aa16.51■□□□□ 0.23
DDX39A-218ENST00000592632 LTBP3Q9NS15 1303 aa16.5■□□□□ 0.23
DDX39A-218ENST00000592632 PPEF1O14829 653 aaPredicted RBP16.5■□□□□ 0.23
DDX39A-218ENST00000592632 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
DDX39A-218ENST00000592632 GRAPQ13588 217 aa16.5■□□□□ 0.23
DDX39A-218ENST00000592632 CC2D2BQ6DHV5 1058 aa16.5■□□□□ 0.23
DDX39A-218ENST00000592632 RTKN2Q8IZC4 609 aa16.5■□□□□ 0.23
DDX39A-218ENST00000592632 GRAPLQ8TC17 118 aaPredicted RBP16.5■□□□□ 0.23
DDX39A-218ENST00000592632 RNF181Q9P0P0 153 aa16.5■□□□□ 0.23
DDX39A-218ENST00000592632 NOB1Q9ULX3 412 aaKnown RBP16.5■□□□□ 0.23
DDX39A-218ENST00000592632 ATP6V0A2Q9Y487 856 aa16.5■□□□□ 0.23
DDX39A-218ENST00000592632 SP8Q8IXZ3 490 aa16.49■□□□□ 0.23
DDX39A-218ENST00000592632 TTLL11Q8NHH1 800 aa16.49■□□□□ 0.23
DDX39A-218ENST00000592632 SNED1Q8TER0 1413 aa16.49■□□□□ 0.23
DDX39A-218ENST00000592632 CELF1Q92879 486 aaKnown RBP16.49■□□□□ 0.23
DDX39A-218ENST00000592632 PLA2G12BQ9BX93 195 aa16.49■□□□□ 0.23
DDX39A-218ENST00000592632 SRCIN1Q9C0H9 1055 aa16.49■□□□□ 0.23
DDX39A-218ENST00000592632 TAOK3Q9H2K8 898 aa16.49■□□□□ 0.23
DDX39A-218ENST00000592632 SEC31BQ9NQW1 1179 aa16.49■□□□□ 0.23
DDX39A-218ENST00000592632 CTSWP56202 376 aa16.48■□□□□ 0.23
DDX39A-218ENST00000592632 RPS8P62241 208 aaKnown RBP16.48■□□□□ 0.23
DDX39A-218ENST00000592632 FKBP4Q02790 459 aaKnown RBP eCLIP16.48■□□□□ 0.23
DDX39A-218ENST00000592632 CCDC152Q4G0S7 254 aa16.48■□□□□ 0.23
DDX39A-218ENST00000592632 CCDC85AQ96PX6 553 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-218ENST00000592632 GRM8O00222 908 aa16.47■□□□□ 0.23
DDX39A-218ENST00000592632 BCAR3O75815 825 aa16.47■□□□□ 0.23
DDX39A-218ENST00000592632 COL4A1P02462 1669 aa16.46■□□□□ 0.23
DDX39A-218ENST00000592632 CSF1RP07333 972 aa16.46■□□□□ 0.23
DDX39A-218ENST00000592632 GRIPAP1Q4V328 841 aa16.46■□□□□ 0.23
DDX39A-218ENST00000592632 PSMD1Q99460 953 aa16.46■□□□□ 0.23
DDX39A-218ENST00000592632 ZNF277Q9NRM2 450 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-218ENST00000592632 MYH3P11055 1940 aa16.46■□□□□ 0.23
DDX39A-218ENST00000592632 DICER1Q9UPY3 1922 aaKnown RBP16.46■□□□□ 0.23
DDX39A-218ENST00000592632 FOXO4P98177 505 aa16.45■□□□□ 0.22
DDX39A-218ENST00000592632 EPHA10Q5JZY3 1008 aa16.45■□□□□ 0.22
DDX39A-218ENST00000592632 TMC4Q7Z404 712 aa16.45■□□□□ 0.22
DDX39A-218ENST00000592632 ARHGAP45Q92619 1136 aa16.45■□□□□ 0.22
DDX39A-218ENST00000592632 GREM2Q9H772 168 aa16.45■□□□□ 0.22
DDX39A-218ENST00000592632 NMRK2Q9NPI5 230 aa16.45■□□□□ 0.22
DDX39A-218ENST00000592632 C9orf78Q9NZ63 289 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-218ENST00000592632 NBPF7P0C2Y1 421 aaPredicted RBP16.44■□□□□ 0.22
DDX39A-218ENST00000592632 API5Q9BZZ5 524 aaKnown RBP16.44■□□□□ 0.22
DDX39A-218ENST00000592632 USP44Q9H0E7 712 aa16.44■□□□□ 0.22
DDX39A-218ENST00000592632 TMX4Q9H1E5 349 aaPredicted RBP16.44■□□□□ 0.22
DDX39A-218ENST00000592632 UTYO14607 1347 aa16.44■□□□□ 0.22
DDX39A-218ENST00000592632 RTL9Q8NET4 1388 aa16.43■□□□□ 0.22
DDX39A-218ENST00000592632 TOMM70O94826 608 aa16.43■□□□□ 0.22
DDX39A-218ENST00000592632 MPNDQ8N594 471 aa16.43■□□□□ 0.22
DDX39A-218ENST00000592632 KAZALD1Q96I82 304 aa16.43■□□□□ 0.22
DDX39A-218ENST00000592632 RTFDC1Q9BY42 306 aaPredicted RBP16.43■□□□□ 0.22
DDX39A-218ENST00000592632 IARSP41252 1262 aaKnown RBP16.42■□□□□ 0.22
DDX39A-218ENST00000592632 C16orf71Q8IYS4 520 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-218ENST00000592632 KIF16BQ96L93 1317 aa16.42■□□□□ 0.22
DDX39A-218ENST00000592632 ZC3H4Q9UPT8 1303 aaKnown RBP16.42■□□□□ 0.22
DDX39A-218ENST00000592632 IPO8O15397 1037 aaKnown RBP16.41■□□□□ 0.22
DDX39A-218ENST00000592632 CCT4P50991 539 aaKnown RBP16.41■□□□□ 0.22
DDX39A-218ENST00000592632 APLP1P51693 650 aa16.41■□□□□ 0.22
DDX39A-218ENST00000592632 FAM161AQ3B820 660 aa16.41■□□□□ 0.22
DDX39A-218ENST00000592632 LMBR1LQ6UX01 489 aa16.41■□□□□ 0.22
DDX39A-218ENST00000592632 DPP8Q6V1X1 898 aaPredicted RBP16.41■□□□□ 0.22
DDX39A-218ENST00000592632 ANKRD18AQ8IVF6 992 aa16.41■□□□□ 0.22
DDX39A-218ENST00000592632 SUCLG2Q96I99 432 aa16.41■□□□□ 0.22
DDX39A-218ENST00000592632 CDC5LQ99459 802 aaKnown RBP16.41■□□□□ 0.22
DDX39A-218ENST00000592632 TNNQ9UQP3 1299 aa16.41■□□□□ 0.22
DDX39A-218ENST00000592632 ITGA6P23229 1130 aa16.4■□□□□ 0.22
DDX39A-218ENST00000592632 GPSM2P81274 684 aa16.4■□□□□ 0.22
DDX39A-218ENST00000592632 KDM2BQ8NHM5 1336 aa16.4■□□□□ 0.22
DDX39A-218ENST00000592632 GLTPD2A6NH11 291 aa16.39■□□□□ 0.21
DDX39A-218ENST00000592632 TRIM27P14373 513 aa16.39■□□□□ 0.21
DDX39A-218ENST00000592632 INTS3Q68E01 1043 aaKnown RBP16.39■□□□□ 0.21
DDX39A-218ENST00000592632 ATF7IPQ6VMQ6 1270 aa16.39■□□□□ 0.21
DDX39A-218ENST00000592632 FRAT1Q92837 279 aaPredicted RBP16.39■□□□□ 0.21
DDX39A-218ENST00000592632 VPS33BQ9H267 617 aa16.39■□□□□ 0.21
DDX39A-218ENST00000592632 BSDC1Q9NW68 430 aaPredicted RBP16.39■□□□□ 0.21
DDX39A-218ENST00000592632 POLLQ9UGP5 575 aa16.39■□□□□ 0.21
DDX39A-218ENST00000592632 NSFL1CQ9UNZ2 370 aaKnown RBP16.39■□□□□ 0.21
DDX39A-218ENST00000592632 FZD9O00144 591 aa16.38■□□□□ 0.21
DDX39A-218ENST00000592632 LARGE2Q8N3Y3 721 aa16.38■□□□□ 0.21
DDX39A-218ENST00000592632 SUPT20HQ8NEM7 779 aa16.38■□□□□ 0.21
DDX39A-218ENST00000592632 PODXL2Q9NZ53 605 aa16.38■□□□□ 0.21
DDX39A-218ENST00000592632 MINPP1Q9UNW1 487 aa16.38■□□□□ 0.21
DDX39A-218ENST00000592632 LRRC37AA6NMS7 1700 aa16.38■□□□□ 0.21
DDX39A-218ENST00000592632 COL4A5P29400 1685 aa16.37■□□□□ 0.21
DDX39A-218ENST00000592632 CEP350Q5VT06 3117 aa16.37■□□□□ 0.21
DDX39A-218ENST00000592632 ANKRD18BA2A2Z9 1011 aa16.37■□□□□ 0.21
DDX39A-218ENST00000592632 IFIT5Q13325 482 aaKnown RBP16.37■□□□□ 0.21
DDX39A-218ENST00000592632 AOC3Q16853 763 aa16.37■□□□□ 0.21
DDX39A-218ENST00000592632 IFFO2Q5TF58 517 aa16.37■□□□□ 0.21
DDX39A-218ENST00000592632 ZKSCAN2Q63HK3 967 aa16.37■□□□□ 0.21
DDX39A-218ENST00000592632 ANKRD44Q8N8A2 993 aa16.37■□□□□ 0.21
DDX39A-218ENST00000592632 TBC1D16Q8TBP0 767 aa16.37■□□□□ 0.21
DDX39A-218ENST00000592632 RBM46Q8TBY0 533 aaKnown RBP16.37■□□□□ 0.21
DDX39A-218ENST00000592632 BICC1Q9H694 974 aaKnown RBP16.37■□□□□ 0.21
DDX39A-218ENST00000592632 CHMP3Q9Y3E7 222 aa16.37■□□□□ 0.21
DDX39A-218ENST00000592632 PPIP5K2O43314 1243 aa16.36■□□□□ 0.21
DDX39A-218ENST00000592632 IGHMBP2P38935 993 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms