RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 USP50Q70EL3 339 aaPredicted RBP24.45■■□□□ 1.5
CCDC43-205ENST00000592333 SCNN1DP51172 638 aa24.44■■□□□ 1.5
CCDC43-205ENST00000592333 KIAA2012Q0VF49 1180 aa24.44■■□□□ 1.5
CCDC43-205ENST00000592333 CDHR2Q9BYE9 1310 aa24.43■■□□□ 1.5
CCDC43-205ENST00000592333 HSPA1AP0DMV8 641 aaKnown RBP24.43■■□□□ 1.5
CCDC43-205ENST00000592333 HSPA1BP0DMV9 641 aaKnown RBP24.43■■□□□ 1.5
CCDC43-205ENST00000592333 AOC3Q16853 763 aa24.43■■□□□ 1.5
CCDC43-205ENST00000592333 GOLGA2Q08379 1002 aa24.41■■□□□ 1.5
CCDC43-205ENST00000592333 MKRN1Q9UHC7 482 aaKnown RBP24.41■■□□□ 1.5
CCDC43-205ENST00000592333 EPS15P42566 896 aa24.4■■□□□ 1.5
CCDC43-205ENST00000592333 CXCL9Q07325 125 aa24.4■■□□□ 1.5
CCDC43-205ENST00000592333 TNIP1Q15025 636 aa24.4■■□□□ 1.5
CCDC43-205ENST00000592333 NCBP3Q53F19 620 aaKnown RBP24.4■■□□□ 1.5
CCDC43-205ENST00000592333 COL13A1Q5TAT6 717 aaPredicted RBP24.4■■□□□ 1.5
CCDC43-205ENST00000592333 MAP1SQ66K74 1059 aaPredicted RBP24.4■■□□□ 1.5
CCDC43-205ENST00000592333 RIC3Q7Z5B4 369 aa24.4■■□□□ 1.5
CCDC43-205ENST00000592333 FAM89AQ96GI7 184 aa24.4■■□□□ 1.5
CCDC43-205ENST00000592333 GPRC5DQ9NZD1 345 aa24.4■■□□□ 1.5
CCDC43-205ENST00000592333 LRRC37AA6NMS7 1700 aa24.39■■□□□ 1.5
CCDC43-205ENST00000592333 LTBP1Q14766 1721 aa24.39■■□□□ 1.5
CCDC43-205ENST00000592333 DDX60Q8IY21 1712 aaKnown RBP24.39■■□□□ 1.5
CCDC43-205ENST00000592333 ATP5J2-PTCD1G3V325 749 aa24.39■■□□□ 1.49
CCDC43-205ENST00000592333 ZBTB38Q8NAP3 1195 aaPredicted RBP24.39■■□□□ 1.49
CCDC43-205ENST00000592333 ADARB2Q9NS39 739 aaKnown RBP24.39■■□□□ 1.49
CCDC43-205ENST00000592333 RASSF10A6NK89 507 aa24.38■■□□□ 1.49
CCDC43-205ENST00000592333 CCDC27Q2M243 656 aa24.38■■□□□ 1.49
CCDC43-205ENST00000592333 CCDC30Q5VVM6 783 aa24.38■■□□□ 1.49
CCDC43-205ENST00000592333 IRS4O14654 1257 aaPredicted RBP24.37■■□□□ 1.49
CCDC43-205ENST00000592333 DDX58O95786 925 aaKnown RBP24.37■■□□□ 1.49
CCDC43-205ENST00000592333 CIAPIN1Q6FI81 312 aa24.37■■□□□ 1.49
CCDC43-205ENST00000592333 SLC51AQ86UW1 340 aa24.37■■□□□ 1.49
CCDC43-205ENST00000592333 CCDC191Q8NCU4 936 aa24.37■■□□□ 1.49
CCDC43-205ENST00000592333 DEFB115Q30KQ5 88 aa24.35■■□□□ 1.49
CCDC43-205ENST00000592333 ZC3H15Q8WU90 426 aaKnown RBP24.35■■□□□ 1.49
CCDC43-205ENST00000592333 PHAXQ9H814 394 aaKnown RBP24.35■■□□□ 1.49
CCDC43-205ENST00000592333 PGAP2Q9UHJ9 254 aa24.35■■□□□ 1.49
CCDC43-205ENST00000592333 VEGFBP49765 207 aa24.34■■□□□ 1.49
CCDC43-205ENST00000592333 C8orf58Q8NAV2 365 aa24.34■■□□□ 1.49
CCDC43-205ENST00000592333 PCCAP05165 728 aaPredicted RBP24.33■■□□□ 1.49
CCDC43-205ENST00000592333 ZEB1P37275 1124 aaPredicted RBP24.33■■□□□ 1.49
CCDC43-205ENST00000592333 RPS8P62241 208 aaKnown RBP24.33■■□□□ 1.49
CCDC43-205ENST00000592333 WASHC4Q2M389 1173 aa24.33■■□□□ 1.49
CCDC43-205ENST00000592333 CELF1Q92879 486 aaKnown RBP24.33■■□□□ 1.49
CCDC43-205ENST00000592333 EYA3Q99504 573 aa24.33■■□□□ 1.49
CCDC43-205ENST00000592333 NSFL1CQ9UNZ2 370 aaKnown RBP24.33■■□□□ 1.49
CCDC43-205ENST00000592333 DUOX1Q9NRD9 1551 aa24.33■■□□□ 1.48
CCDC43-205ENST00000592333 ELL2O00472 640 aaPredicted RBP24.32■■□□□ 1.48
CCDC43-205ENST00000592333 GMPSP49915 693 aaPredicted RBP24.32■■□□□ 1.48
CCDC43-205ENST00000592333 TNS4Q8IZW8 715 aa24.32■■□□□ 1.48
CCDC43-205ENST00000592333 DPF2Q92785 391 aa24.32■■□□□ 1.48
CCDC43-205ENST00000592333 METTL22Q9BUU2 404 aaPredicted RBP24.32■■□□□ 1.48
CCDC43-205ENST00000592333 BCL2L13Q9BXK5 485 aa24.31■■□□□ 1.48
CCDC43-205ENST00000592333 CWC25Q9NXE8 425 aaPredicted RBP24.31■■□□□ 1.48
CCDC43-205ENST00000592333 PODXL2Q9NZ53 605 aa24.31■■□□□ 1.48
CCDC43-205ENST00000592333 IL16Q14005 1332 aa24.31■■□□□ 1.48
CCDC43-205ENST00000592333 TAF1P21675 1872 aa24.3■■□□□ 1.48
CCDC43-205ENST00000592333 CCDC152Q4G0S7 254 aa24.3■■□□□ 1.48
CCDC43-205ENST00000592333 MYD88Q99836 296 aa24.3■■□□□ 1.48
CCDC43-205ENST00000592333 YDJCA8MPS7 323 aa24.29■■□□□ 1.48
CCDC43-205ENST00000592333 PDE8AO60658 829 aa24.29■■□□□ 1.48
CCDC43-205ENST00000592333 AIDAQ96BJ3 306 aa24.29■■□□□ 1.48
CCDC43-205ENST00000592333 ABT1Q9ULW3 272 aaKnown RBP24.29■■□□□ 1.48
CCDC43-205ENST00000592333 H7C1D1 291 aa24.28■■□□□ 1.48
CCDC43-205ENST00000592333 RAD17O75943 681 aa24.28■■□□□ 1.48
CCDC43-205ENST00000592333 RPS12P25398 132 aaKnown RBP24.28■■□□□ 1.48
CCDC43-205ENST00000592333 KSR2Q6VAB6 950 aa24.28■■□□□ 1.48
CCDC43-205ENST00000592333 WWC1Q8IX03 1113 aa24.28■■□□□ 1.48
CCDC43-205ENST00000592333 STK31Q9BXU1 1019 aa24.28■■□□□ 1.48
CCDC43-205ENST00000592333 PRDM10Q9NQV6 1147 aa24.28■■□□□ 1.48
CCDC43-205ENST00000592333 WBP1LQ9NX94 342 aa24.28■■□□□ 1.48
CCDC43-205ENST00000592333 POLLQ9UGP5 575 aa24.28■■□□□ 1.48
CCDC43-205ENST00000592333 C6orf229H3BNL8 230 aa24.27■■□□□ 1.48
CCDC43-205ENST00000592333 ECE1P42892 770 aa24.27■■□□□ 1.48
CCDC43-205ENST00000592333 GPSM2P81274 684 aa24.27■■□□□ 1.48
CCDC43-205ENST00000592333 MAP2K1Q02750 393 aaPredicted RBP24.27■■□□□ 1.48
CCDC43-205ENST00000592333 RTL5Q5HYW3 569 aaPredicted RBP24.27■■□□□ 1.48
CCDC43-205ENST00000592333 CNOT7Q9UIV1 285 aaKnown RBP24.27■■□□□ 1.48
CCDC43-205ENST00000592333 WDR33Q9C0J8 1336 aaKnown RBP24.27■■□□□ 1.48
CCDC43-205ENST00000592333 CTCFP49711 727 aaPredicted RBP24.26■■□□□ 1.47
CCDC43-205ENST00000592333 TBC1D16Q8TBP0 767 aa24.26■■□□□ 1.47
CCDC43-205ENST00000592333 TRPM7Q96QT4 1865 aa24.26■■□□□ 1.47
CCDC43-205ENST00000592333 NEXNQ0ZGT2 675 aa24.25■■□□□ 1.47
CCDC43-205ENST00000592333 CST9Q5W186 159 aa24.25■■□□□ 1.47
CCDC43-205ENST00000592333 TSPYL6Q8N831 410 aa24.25■■□□□ 1.47
CCDC43-205ENST00000592333 ZNF428Q96B54 188 aa24.25■■□□□ 1.47
CCDC43-205ENST00000592333 HHIPL1Q96JK4 782 aa24.25■■□□□ 1.47
CCDC43-205ENST00000592333 TLL2Q9Y6L7 1015 aa24.25■■□□□ 1.47
CCDC43-205ENST00000592333 FOXN1O15353 648 aa24.24■■□□□ 1.47
CCDC43-205ENST00000592333 CDC37L1Q7L3B6 337 aa24.24■■□□□ 1.47
CCDC43-205ENST00000592333 ZC3H12CQ9C0D7 883 aaKnown RBP24.24■■□□□ 1.47
CCDC43-205ENST00000592333 MAP3K2Q9Y2U5 619 aa24.24■■□□□ 1.47
CCDC43-205ENST00000592333 CCDC184Q52MB2 194 aa24.23■■□□□ 1.47
CCDC43-205ENST00000592333 PI4KAP2A4QPH2 592 aa24.22■■□□□ 1.47
CCDC43-205ENST00000592333 PSMD14O00487 310 aa24.22■■□□□ 1.47
CCDC43-205ENST00000592333 HIRAP54198 1017 aaPredicted RBP24.22■■□□□ 1.47
CCDC43-205ENST00000592333 TWISTNBQ3B726 338 aaPredicted RBP24.22■■□□□ 1.47
CCDC43-205ENST00000592333 MICALL2Q8IY33 904 aa24.22■■□□□ 1.47
CCDC43-205ENST00000592333 PI4KAP1Q8N8J0 262 aa24.22■■□□□ 1.47
CCDC43-205ENST00000592333 DBNDD1Q9H9R9 158 aa24.22■■□□□ 1.47
CCDC43-205ENST00000592333 SEC31BQ9NQW1 1179 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms