RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 COPRSQ9NQ92 184 aa20.95■□□□□ 0.94
GCDH-212ENST00000590530 ABCC12Q96J65 1359 aa20.95■□□□□ 0.94
GCDH-212ENST00000590530 BMP2KLQ5H9B9 411 aa20.94■□□□□ 0.94
GCDH-212ENST00000590530 RGPD3A6NKT7 1758 aaPredicted RBP20.94■□□□□ 0.94
GCDH-212ENST00000590530 RGPD4Q7Z3J3 1758 aa20.94■□□□□ 0.94
GCDH-212ENST00000590530 OS9Q13438 667 aaPredicted RBP20.94■□□□□ 0.94
GCDH-212ENST00000590530 PUS3Q9BZE2 481 aaKnown RBP20.94■□□□□ 0.94
GCDH-212ENST00000590530 TUBGCP6Q96RT7 1819 aa20.94■□□□□ 0.94
GCDH-212ENST00000590530 NBPF5PQ86XG9 351 aaPredicted RBP20.93■□□□□ 0.94
GCDH-212ENST00000590530 PLEKHM2Q8IWE5 1019 aa20.93■□□□□ 0.94
GCDH-212ENST00000590530 RAB11FIP3O75154 756 aa20.92■□□□□ 0.94
GCDH-212ENST00000590530 SLC15A2Q16348 729 aa20.92■□□□□ 0.94
GCDH-212ENST00000590530 LRRC24Q50LG9 513 aa20.92■□□□□ 0.94
GCDH-212ENST00000590530 TSHZ3Q63HK5 1081 aa20.92■□□□□ 0.94
GCDH-212ENST00000590530 TM4SF1P30408 202 aa20.92■□□□□ 0.94
GCDH-212ENST00000590530 ANP32AP39687 249 aaKnown RBP20.92■□□□□ 0.94
GCDH-212ENST00000590530 DDR1Q08345 913 aa20.92■□□□□ 0.94
GCDH-212ENST00000590530 G3BP1Q13283 466 aaKnown RBP eCLIP20.92■□□□□ 0.94
GCDH-212ENST00000590530 PDGFDQ9GZP0 370 aaPredicted RBP20.92■□□□□ 0.94
GCDH-212ENST00000590530 ITGA6P23229 1130 aa20.91■□□□□ 0.94
GCDH-212ENST00000590530 ATG9AQ7Z3C6 839 aa20.91■□□□□ 0.94
GCDH-212ENST00000590530 KIF1BPQ96EK5 621 aa20.91■□□□□ 0.94
GCDH-212ENST00000590530 SEC31BQ9NQW1 1179 aa20.91■□□□□ 0.94
GCDH-212ENST00000590530 CCDC57Q2TAC2 916 aa20.9■□□□□ 0.94
GCDH-212ENST00000590530 DDX60Q8IY21 1712 aaKnown RBP20.9■□□□□ 0.94
GCDH-212ENST00000590530 GTF2E1P29083 439 aaPredicted RBP20.9■□□□□ 0.94
GCDH-212ENST00000590530 MSL1Q68DK7 614 aa20.9■□□□□ 0.94
GCDH-212ENST00000590530 COL24A1Q17RW2 1714 aa20.89■□□□□ 0.94
GCDH-212ENST00000590530 IFIT5Q13325 482 aaKnown RBP20.89■□□□□ 0.93
GCDH-212ENST00000590530 HSP90AB4PQ58FF6 505 aa20.89■□□□□ 0.93
GCDH-212ENST00000590530 SALL3Q9BXA9 1300 aa20.89■□□□□ 0.93
GCDH-212ENST00000590530 COL4A1P02462 1669 aa20.89■□□□□ 0.93
GCDH-212ENST00000590530 CARMIL3Q8ND23 1372 aa20.88■□□□□ 0.93
GCDH-212ENST00000590530 TFCP2Q12800 502 aa20.88■□□□□ 0.93
GCDH-212ENST00000590530 TPTE2Q6XPS3 522 aa20.88■□□□□ 0.93
GCDH-212ENST00000590530 STK32BQ9NY57 414 aa20.88■□□□□ 0.93
GCDH-212ENST00000590530 SLC10A5Q5PT55 438 aa20.88■□□□□ 0.93
GCDH-212ENST00000590530 EYA2O00167 538 aa20.87■□□□□ 0.93
GCDH-212ENST00000590530 POLRMTO00411 1230 aaKnown RBP20.87■□□□□ 0.93
GCDH-212ENST00000590530 SERPINB2P05120 415 aa20.87■□□□□ 0.93
GCDH-212ENST00000590530 EAF2Q96CJ1 260 aaPredicted RBP20.87■□□□□ 0.93
GCDH-212ENST00000590530 NYXQ9GZU5 481 aa20.87■□□□□ 0.93
GCDH-212ENST00000590530 HMGB2P26583 209 aaKnown RBP20.86■□□□□ 0.93
GCDH-212ENST00000590530 PRR5LQ6MZQ0 368 aa20.86■□□□□ 0.93
GCDH-212ENST00000590530 OSBPL3Q9H4L5 887 aa20.86■□□□□ 0.93
GCDH-212ENST00000590530 TLR7Q9NYK1 1049 aaKnown RBP20.86■□□□□ 0.93
GCDH-212ENST00000590530 ANKRD18BA2A2Z9 1011 aa20.86■□□□□ 0.93
GCDH-212ENST00000590530 TTC22Q5TAA0 569 aa20.86■□□□□ 0.93
GCDH-212ENST00000590530 GSPT1P15170 499 aaKnown RBP20.85■□□□□ 0.93
GCDH-212ENST00000590530 PDE1AP54750 535 aa20.85■□□□□ 0.93
GCDH-212ENST00000590530 ERC1Q8IUD2 1116 aa20.85■□□□□ 0.93
GCDH-212ENST00000590530 CNBD1Q8NA66 436 aa20.85■□□□□ 0.93
GCDH-212ENST00000590530 FLAD1Q8NFF5 587 aa20.85■□□□□ 0.93
GCDH-212ENST00000590530 CCDC8Q9H0W5 538 aaPredicted RBP20.85■□□□□ 0.93
GCDH-212ENST00000590530 TAF7LQ5H9L4 462 aa20.84■□□□□ 0.93
GCDH-212ENST00000590530 AACSQ86V21 672 aa20.84■□□□□ 0.93
GCDH-212ENST00000590530 NPHP1O15259 732 aa20.84■□□□□ 0.93
GCDH-212ENST00000590530 SF3B3Q15393 1217 aaKnown RBP20.84■□□□□ 0.93
GCDH-212ENST00000590530 CCDC152Q4G0S7 254 aa20.84■□□□□ 0.93
GCDH-212ENST00000590530 CCDC125Q86Z20 511 aa20.84■□□□□ 0.93
GCDH-212ENST00000590530 UPF1Q92900 1129 aaKnown RBP eCLIP20.84■□□□□ 0.93
GCDH-212ENST00000590530 MX1P20591 662 aa20.83■□□□□ 0.92
GCDH-212ENST00000590530 CLASRPQ8N2M8 674 aaKnown RBP20.83■□□□□ 0.92
GCDH-212ENST00000590530 NLGN1Q8N2Q7 840 aa20.83■□□□□ 0.92
GCDH-212ENST00000590530 RIPOR2Q9Y4F9 1068 aa20.83■□□□□ 0.92
GCDH-212ENST00000590530 MYH3P11055 1940 aa20.83■□□□□ 0.92
GCDH-212ENST00000590530 SEC24BO95487 1268 aa20.82■□□□□ 0.92
GCDH-212ENST00000590530 LDHAL6AQ6ZMR3 332 aa20.82■□□□□ 0.92
GCDH-212ENST00000590530 SLC51AQ86UW1 340 aa20.82■□□□□ 0.92
GCDH-212ENST00000590530 AOX1Q06278 1338 aa20.82■□□□□ 0.92
GCDH-212ENST00000590530 TNRC6CQ9HCJ0 1690 aaKnown RBP20.82■□□□□ 0.92
GCDH-212ENST00000590530 LAMB2P55268 1798 aa20.82■□□□□ 0.92
GCDH-212ENST00000590530 CIAO1O76071 339 aa20.81■□□□□ 0.92
GCDH-212ENST00000590530 MMP10P09238 476 aa20.81■□□□□ 0.92
GCDH-212ENST00000590530 IL15P40933 162 aaPredicted RBP20.81■□□□□ 0.92
GCDH-212ENST00000590530 TNNI3KQ59H18 835 aa20.81■□□□□ 0.92
GCDH-212ENST00000590530 NLRP3Q96P20 1036 aa20.81■□□□□ 0.92
GCDH-212ENST00000590530 UPF2Q9HAU5 1272 aaKnown RBP20.81■□□□□ 0.92
GCDH-212ENST00000590530 STAP2Q9UGK3 403 aa20.81■□□□□ 0.92
GCDH-212ENST00000590530 FPGT-TNNI3KV9GXZ4 949 aa20.81■□□□□ 0.92
GCDH-212ENST00000590530 CELF1Q92879 486 aaKnown RBP20.8■□□□□ 0.92
GCDH-212ENST00000590530 RIC1Q4ADV7 1423 aa20.8■□□□□ 0.92
GCDH-212ENST00000590530 TIMM10P62072 90 aa20.79■□□□□ 0.92
GCDH-212ENST00000590530 HELBQ8NG08 1087 aaPredicted RBP20.79■□□□□ 0.92
GCDH-212ENST00000590530 CNNM1Q9NRU3 951 aa20.79■□□□□ 0.92
GCDH-212ENST00000590530 RTL9Q8NET4 1388 aa20.79■□□□□ 0.92
GCDH-212ENST00000590530 IFIT2P09913 472 aaKnown RBP20.79■□□□□ 0.92
GCDH-212ENST00000590530 HSP90B1P14625 803 aaKnown RBP20.79■□□□□ 0.92
GCDH-212ENST00000590530 PI4K2BQ8TCG2 481 aa20.79■□□□□ 0.92
GCDH-212ENST00000590530 IPO9Q96P70 1041 aaKnown RBP20.79■□□□□ 0.92
GCDH-212ENST00000590530 DBNLQ9UJU6 430 aaKnown RBP20.79■□□□□ 0.92
GCDH-212ENST00000590530 TAF1P21675 1872 aa20.78■□□□□ 0.92
GCDH-212ENST00000590530 SNAP23O00161 211 aa20.78■□□□□ 0.92
GCDH-212ENST00000590530 CDC45O75419 566 aa20.78■□□□□ 0.92
GCDH-212ENST00000590530 DBNDD2Q9BQY9 259 aa20.78■□□□□ 0.92
GCDH-212ENST00000590530 MAP4K4O95819 1239 aaPredicted RBP20.77■□□□□ 0.92
GCDH-212ENST00000590530 METTL24Q5JXM2 366 aa20.77■□□□□ 0.92
GCDH-212ENST00000590530 VGLL2Q8N8G2 317 aa20.77■□□□□ 0.92
GCDH-212ENST00000590530 CEP126Q9P2H0 1117 aa20.77■□□□□ 0.92
GCDH-212ENST00000590530 LRP5O75197 1615 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms