RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 GRAPLQ8TC17 118 aaPredicted RBP18.57■□□□□ 0.56
CXXC1-213ENST00000590234 BBOX1O75936 387 aa18.56■□□□□ 0.56
CXXC1-213ENST00000590234 SRCIN1Q9C0H9 1055 aa18.56■□□□□ 0.56
CXXC1-213ENST00000590234 TMX4Q9H1E5 349 aaPredicted RBP18.56■□□□□ 0.56
CXXC1-213ENST00000590234 MYH3P11055 1940 aa18.55■□□□□ 0.56
CXXC1-213ENST00000590234 TAF1P21675 1872 aa18.55■□□□□ 0.56
CXXC1-213ENST00000590234 CCDC88AQ3V6T2 1871 aa18.55■□□□□ 0.56
CXXC1-213ENST00000590234 ALDH1L1O75891 902 aa18.55■□□□□ 0.56
CXXC1-213ENST00000590234 PRELPP51888 382 aa18.55■□□□□ 0.56
CXXC1-213ENST00000590234 BRPF1P55201 1214 aaPredicted RBP18.55■□□□□ 0.56
CXXC1-213ENST00000590234 FKBP4Q02790 459 aaKnown RBP eCLIP18.55■□□□□ 0.56
CXXC1-213ENST00000590234 CCDC152Q4G0S7 254 aa18.55■□□□□ 0.56
CXXC1-213ENST00000590234 ATP6V0A2Q9Y487 856 aa18.55■□□□□ 0.56
CXXC1-213ENST00000590234 SNED1Q8TER0 1413 aa18.55■□□□□ 0.56
CXXC1-213ENST00000590234 CASP7P55210 303 aa18.54■□□□□ 0.56
CXXC1-213ENST00000590234 CTSWP56202 376 aa18.54■□□□□ 0.56
CXXC1-213ENST00000590234 GRIPAP1Q4V328 841 aa18.54■□□□□ 0.56
CXXC1-213ENST00000590234 TIAM2Q8IVF5 1701 aa18.54■□□□□ 0.56
CXXC1-213ENST00000590234 TMC4Q7Z404 712 aa18.53■□□□□ 0.56
CXXC1-213ENST00000590234 SLC51AQ86UW1 340 aa18.53■□□□□ 0.56
CXXC1-213ENST00000590234 CELF1Q92879 486 aaKnown RBP18.53■□□□□ 0.56
CXXC1-213ENST00000590234 CCDC85AQ96PX6 553 aaPredicted RBP18.53■□□□□ 0.56
CXXC1-213ENST00000590234 NOB1Q9ULX3 412 aaKnown RBP18.53■□□□□ 0.56
CXXC1-213ENST00000590234 KIF16BQ96L93 1317 aa18.52■□□□□ 0.56
CXXC1-213ENST00000590234 ZC3H4Q9UPT8 1303 aaKnown RBP18.52■□□□□ 0.56
CXXC1-213ENST00000590234 GRM8O00222 908 aa18.52■□□□□ 0.56
CXXC1-213ENST00000590234 SP8Q8IXZ3 490 aa18.52■□□□□ 0.56
CXXC1-213ENST00000590234 PSMD1Q99460 953 aa18.52■□□□□ 0.56
CXXC1-213ENST00000590234 PLA2G12BQ9BX93 195 aa18.52■□□□□ 0.56
CXXC1-213ENST00000590234 C9orf78Q9NZ63 289 aaPredicted RBP18.52■□□□□ 0.56
CXXC1-213ENST00000590234 COL4A1P02462 1669 aa18.52■□□□□ 0.56
CXXC1-213ENST00000590234 DICER1Q9UPY3 1922 aaKnown RBP18.52■□□□□ 0.56
CXXC1-213ENST00000590234 LRRC37AA6NMS7 1700 aa18.52■□□□□ 0.55
CXXC1-213ENST00000590234 TTLL11Q8NHH1 800 aa18.51■□□□□ 0.55
CXXC1-213ENST00000590234 API5Q9BZZ5 524 aaKnown RBP18.51■□□□□ 0.55
CXXC1-213ENST00000590234 SEC31BQ9NQW1 1179 aa18.51■□□□□ 0.55
CXXC1-213ENST00000590234 RPS8P62241 208 aaKnown RBP18.5■□□□□ 0.55
CXXC1-213ENST00000590234 ZNF526Q8TF50 670 aaPredicted RBP18.5■□□□□ 0.55
CXXC1-213ENST00000590234 ZNF277Q9NRM2 450 aaPredicted RBP18.5■□□□□ 0.55
CXXC1-213ENST00000590234 IARSP41252 1262 aaKnown RBP18.49■□□□□ 0.55
CXXC1-213ENST00000590234 GREM2Q9H772 168 aa18.49■□□□□ 0.55
CXXC1-213ENST00000590234 GPBP1L1Q9HC44 474 aaPredicted RBP18.49■□□□□ 0.55
CXXC1-213ENST00000590234 RTL9Q8NET4 1388 aa18.49■□□□□ 0.55
CXXC1-213ENST00000590234 BCAR3O75815 825 aa18.48■□□□□ 0.55
CXXC1-213ENST00000590234 DPP8Q6V1X1 898 aaPredicted RBP18.48■□□□□ 0.55
CXXC1-213ENST00000590234 ANKRD18AQ8IVF6 992 aa18.48■□□□□ 0.55
CXXC1-213ENST00000590234 MPNDQ8N594 471 aa18.48■□□□□ 0.55
CXXC1-213ENST00000590234 ARHGAP45Q92619 1136 aa18.48■□□□□ 0.55
CXXC1-213ENST00000590234 CDC5LQ99459 802 aaKnown RBP18.48■□□□□ 0.55
CXXC1-213ENST00000590234 CSF1RP07333 972 aa18.47■□□□□ 0.55
CXXC1-213ENST00000590234 CCT4P50991 539 aaKnown RBP18.47■□□□□ 0.55
CXXC1-213ENST00000590234 SUPT20HQ8NEM7 779 aa18.47■□□□□ 0.55
CXXC1-213ENST00000590234 UTYO14607 1347 aa18.47■□□□□ 0.55
CXXC1-213ENST00000590234 IPO8O15397 1037 aaKnown RBP18.46■□□□□ 0.55
CXXC1-213ENST00000590234 NBPF7P0C2Y1 421 aaPredicted RBP18.46■□□□□ 0.55
CXXC1-213ENST00000590234 FOXO4P98177 505 aa18.46■□□□□ 0.55
CXXC1-213ENST00000590234 FAM161AQ3B820 660 aa18.46■□□□□ 0.55
CXXC1-213ENST00000590234 FRAT1Q92837 279 aaPredicted RBP18.46■□□□□ 0.55
CXXC1-213ENST00000590234 RTFDC1Q9BY42 306 aaPredicted RBP18.46■□□□□ 0.55
CXXC1-213ENST00000590234 SPEF2Q9C093 1822 aa18.45■□□□□ 0.54
CXXC1-213ENST00000590234 ITGA6P23229 1130 aa18.45■□□□□ 0.54
CXXC1-213ENST00000590234 SUCLG2Q96I99 432 aa18.45■□□□□ 0.54
CXXC1-213ENST00000590234 NSFL1CQ9UNZ2 370 aaKnown RBP18.45■□□□□ 0.54
CXXC1-213ENST00000590234 DUOX1Q9NRD9 1551 aa18.45■□□□□ 0.54
CXXC1-213ENST00000590234 KDM2BQ8NHM5 1336 aa18.45■□□□□ 0.54
CXXC1-213ENST00000590234 IGHMBP2P38935 993 aaKnown RBP18.44■□□□□ 0.54
CXXC1-213ENST00000590234 EPHA10Q5JZY3 1008 aa18.44■□□□□ 0.54
CXXC1-213ENST00000590234 ATF7IPQ6VMQ6 1270 aa18.44■□□□□ 0.54
CXXC1-213ENST00000590234 JDP2Q8WYK2 163 aa18.44■□□□□ 0.54
CXXC1-213ENST00000590234 VPS33BQ9H267 617 aa18.44■□□□□ 0.54
CXXC1-213ENST00000590234 CHMP3Q9Y3E7 222 aa18.44■□□□□ 0.54
CXXC1-213ENST00000590234 LTBP1Q14766 1721 aa18.43■□□□□ 0.54
CXXC1-213ENST00000590234 ANKRD18BA2A2Z9 1011 aa18.43■□□□□ 0.54
CXXC1-213ENST00000590234 GLTPD2A6NH11 291 aa18.43■□□□□ 0.54
CXXC1-213ENST00000590234 PPIP5K2O43314 1243 aa18.43■□□□□ 0.54
CXXC1-213ENST00000590234 TRIM27P14373 513 aa18.43■□□□□ 0.54
CXXC1-213ENST00000590234 GPSM2P81274 684 aa18.43■□□□□ 0.54
CXXC1-213ENST00000590234 DPY19L2Q6NUT2 758 aa18.43■□□□□ 0.54
CXXC1-213ENST00000590234 LMBR1LQ6UX01 489 aa18.43■□□□□ 0.54
CXXC1-213ENST00000590234 LARGE2Q8N3Y3 721 aa18.43■□□□□ 0.54
CXXC1-213ENST00000590234 USP44Q9H0E7 712 aa18.43■□□□□ 0.54
CXXC1-213ENST00000590234 BSDC1Q9NW68 430 aaPredicted RBP18.43■□□□□ 0.54
CXXC1-213ENST00000590234 COL4A5P29400 1685 aa18.42■□□□□ 0.54
CXXC1-213ENST00000590234 IFIT5Q13325 482 aaKnown RBP18.42■□□□□ 0.54
CXXC1-213ENST00000590234 AOC3Q16853 763 aa18.42■□□□□ 0.54
CXXC1-213ENST00000590234 ZKSCAN2Q63HK3 967 aa18.42■□□□□ 0.54
CXXC1-213ENST00000590234 KAZALD1Q96I82 304 aa18.42■□□□□ 0.54
CXXC1-213ENST00000590234 ANKIB1Q9P2G1 1089 aa18.42■□□□□ 0.54
CXXC1-213ENST00000590234 MPHOSPH8Q99549 860 aa18.41■□□□□ 0.54
CXXC1-213ENST00000590234 PODXL2Q9NZ53 605 aa18.41■□□□□ 0.54
CXXC1-213ENST00000590234 C6orf229H3BNL8 230 aa18.4■□□□□ 0.54
CXXC1-213ENST00000590234 FZD9O00144 591 aa18.4■□□□□ 0.54
CXXC1-213ENST00000590234 KIAA2012Q0VF49 1180 aa18.4■□□□□ 0.54
CXXC1-213ENST00000590234 CCDC57Q2TAC2 916 aa18.4■□□□□ 0.54
CXXC1-213ENST00000590234 INTS3Q68E01 1043 aaKnown RBP18.4■□□□□ 0.54
CXXC1-213ENST00000590234 NIM1KQ8IY84 436 aa18.4■□□□□ 0.54
CXXC1-213ENST00000590234 BICC1Q9H694 974 aaKnown RBP18.4■□□□□ 0.54
CXXC1-213ENST00000590234 NMRK2Q9NPI5 230 aa18.4■□□□□ 0.54
CXXC1-213ENST00000590234 POLLQ9UGP5 575 aa18.4■□□□□ 0.54
CXXC1-213ENST00000590234 RABL6Q3YEC7 729 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 202.8 ms