RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 CASP7P55210 303 aa26.91■■□□□ 1.9
ATG4D-212ENST00000590096 PPEF1O14829 653 aaPredicted RBP26.9■■□□□ 1.9
ATG4D-212ENST00000590096 CTSWP56202 376 aa26.9■■□□□ 1.9
ATG4D-212ENST00000590096 GRAPQ13588 217 aa26.9■■□□□ 1.9
ATG4D-212ENST00000590096 ZKSCAN2Q63HK3 967 aa26.9■■□□□ 1.9
ATG4D-212ENST00000590096 ATF7IPQ6VMQ6 1270 aa26.9■■□□□ 1.9
ATG4D-212ENST00000590096 GRAPLQ8TC17 118 aaPredicted RBP26.9■■□□□ 1.9
ATG4D-212ENST00000590096 PLA2G12BQ9BX93 195 aa26.9■■□□□ 1.9
ATG4D-212ENST00000590096 TMX4Q9H1E5 349 aaPredicted RBP26.89■■□□□ 1.9
ATG4D-212ENST00000590096 CCDC93Q567U6 631 aa26.88■■□□□ 1.89
ATG4D-212ENST00000590096 C7orf43Q8WVR3 580 aa26.88■■□□□ 1.89
ATG4D-212ENST00000590096 CCDC85AQ96PX6 553 aaPredicted RBP26.88■■□□□ 1.89
ATG4D-212ENST00000590096 BBOX1O75936 387 aa26.87■■□□□ 1.89
ATG4D-212ENST00000590096 TRIM27P14373 513 aa26.87■■□□□ 1.89
ATG4D-212ENST00000590096 TAF1P21675 1872 aa26.86■■□□□ 1.89
ATG4D-212ENST00000590096 CC2D2BQ6DHV5 1058 aa26.86■■□□□ 1.89
ATG4D-212ENST00000590096 TTLL11Q8NHH1 800 aa26.86■■□□□ 1.89
ATG4D-212ENST00000590096 RCAN3Q9UKA8 241 aa26.86■■□□□ 1.89
ATG4D-212ENST00000590096 TMC4Q7Z404 712 aa26.85■■□□□ 1.89
ATG4D-212ENST00000590096 FER1L6Q2WGJ9 1857 aa26.85■■□□□ 1.89
ATG4D-212ENST00000590096 NBPF7P0C2Y1 421 aaPredicted RBP26.84■■□□□ 1.89
ATG4D-212ENST00000590096 RTKN2Q8IZC4 609 aa26.84■■□□□ 1.89
ATG4D-212ENST00000590096 CLUAP1Q96AJ1 413 aa26.84■■□□□ 1.89
ATG4D-212ENST00000590096 SEC31BQ9NQW1 1179 aa26.84■■□□□ 1.89
ATG4D-212ENST00000590096 UTYO14607 1347 aa26.84■■□□□ 1.89
ATG4D-212ENST00000590096 RASSF7Q02833 373 aa26.83■■□□□ 1.89
ATG4D-212ENST00000590096 OLFM4Q6UX06 510 aa26.83■■□□□ 1.89
ATG4D-212ENST00000590096 CELF1Q92879 486 aaKnown RBP26.83■■□□□ 1.89
ATG4D-212ENST00000590096 TAOK3Q9H2K8 898 aa26.83■■□□□ 1.89
ATG4D-212ENST00000590096 ATP6V0A2Q9Y487 856 aa26.83■■□□□ 1.89
ATG4D-212ENST00000590096 NFKBIEO00221 500 aa26.82■■□□□ 1.88
ATG4D-212ENST00000590096 GRIPAP1Q4V328 841 aa26.82■■□□□ 1.88
ATG4D-212ENST00000590096 INTS3Q68E01 1043 aaKnown RBP26.82■■□□□ 1.88
ATG4D-212ENST00000590096 FTSJ3Q8IY81 847 aaKnown RBP26.82■■□□□ 1.88
ATG4D-212ENST00000590096 CDC5LQ99459 802 aaKnown RBP26.82■■□□□ 1.88
ATG4D-212ENST00000590096 USP44Q9H0E7 712 aa26.82■■□□□ 1.88
ATG4D-212ENST00000590096 GREM2Q9H772 168 aa26.82■■□□□ 1.88
ATG4D-212ENST00000590096 RTL9Q8NET4 1388 aa26.82■■□□□ 1.88
ATG4D-212ENST00000590096 CSF1RP07333 972 aa26.81■■□□□ 1.88
ATG4D-212ENST00000590096 RPS8P62241 208 aaKnown RBP26.81■■□□□ 1.88
ATG4D-212ENST00000590096 SP8Q8IXZ3 490 aa26.81■■□□□ 1.88
ATG4D-212ENST00000590096 TNNQ9UQP3 1299 aa26.81■■□□□ 1.88
ATG4D-212ENST00000590096 CHMP3Q9Y3E7 222 aa26.81■■□□□ 1.88
ATG4D-212ENST00000590096 FOXO4P98177 505 aa26.8■■□□□ 1.88
ATG4D-212ENST00000590096 ANKRD18AQ8IVF6 992 aa26.8■■□□□ 1.88
ATG4D-212ENST00000590096 SUCLG2Q96I99 432 aa26.8■■□□□ 1.88
ATG4D-212ENST00000590096 LTBP3Q9NS15 1303 aa26.8■■□□□ 1.88
ATG4D-212ENST00000590096 FKBP4Q02790 459 aaKnown RBP eCLIP26.79■■□□□ 1.88
ATG4D-212ENST00000590096 FAM161AQ3B820 660 aa26.79■■□□□ 1.88
ATG4D-212ENST00000590096 DZIP1LQ8IYY4 767 aaKnown RBP26.79■■□□□ 1.88
ATG4D-212ENST00000590096 SBF1O95248 1867 aa26.79■■□□□ 1.88
ATG4D-212ENST00000590096 UBTFL1P0CB47 393 aaPredicted RBP26.78■■□□□ 1.88
ATG4D-212ENST00000590096 LMNB1P20700 586 aa26.78■■□□□ 1.88
ATG4D-212ENST00000590096 ITGA6P23229 1130 aa26.78■■□□□ 1.88
ATG4D-212ENST00000590096 EPHA10Q5JZY3 1008 aa26.78■■□□□ 1.88
ATG4D-212ENST00000590096 C9orf131Q5VYM1 1079 aa26.78■■□□□ 1.88
ATG4D-212ENST00000590096 LMBR1LQ6UX01 489 aa26.78■■□□□ 1.88
ATG4D-212ENST00000590096 RNF181Q9P0P0 153 aa26.78■■□□□ 1.88
ATG4D-212ENST00000590096 COL4A1P02462 1669 aa26.77■■□□□ 1.88
ATG4D-212ENST00000590096 HDAC5Q9UQL6 1122 aa26.77■■□□□ 1.88
ATG4D-212ENST00000590096 ANKRD18BA2A2Z9 1011 aa26.76■■□□□ 1.87
ATG4D-212ENST00000590096 MS4A1P11836 297 aa26.76■■□□□ 1.87
ATG4D-212ENST00000590096 IGHMBP2P38935 993 aaKnown RBP26.76■■□□□ 1.87
ATG4D-212ENST00000590096 IFIT5Q13325 482 aaKnown RBP26.76■■□□□ 1.87
ATG4D-212ENST00000590096 TMEM57Q8N5G2 664 aa26.76■■□□□ 1.87
ATG4D-212ENST00000590096 PSMD1Q99460 953 aa26.76■■□□□ 1.87
ATG4D-212ENST00000590096 CCDC88AQ3V6T2 1871 aa26.76■■□□□ 1.87
ATG4D-212ENST00000590096 LRRC37AA6NMS7 1700 aa26.76■■□□□ 1.87
ATG4D-212ENST00000590096 SNED1Q8TER0 1413 aa26.75■■□□□ 1.87
ATG4D-212ENST00000590096 SLC51AQ86UW1 340 aa26.75■■□□□ 1.87
ATG4D-212ENST00000590096 MPNDQ8N594 471 aa26.75■■□□□ 1.87
ATG4D-212ENST00000590096 KAZALD1Q96I82 304 aa26.75■■□□□ 1.87
ATG4D-212ENST00000590096 BICC1Q9H694 974 aaKnown RBP26.75■■□□□ 1.87
ATG4D-212ENST00000590096 GNAI3P08754 354 aa26.74■■□□□ 1.87
ATG4D-212ENST00000590096 CCDC57Q2TAC2 916 aa26.74■■□□□ 1.87
ATG4D-212ENST00000590096 DPP8Q6V1X1 898 aaPredicted RBP26.74■■□□□ 1.87
ATG4D-212ENST00000590096 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.74■■□□□ 1.87
ATG4D-212ENST00000590096 SPEF2Q9C093 1822 aa26.74■■□□□ 1.87
ATG4D-212ENST00000590096 MEIS3Q99687 375 aa26.73■■□□□ 1.87
ATG4D-212ENST00000590096 PRELPP51888 382 aa26.72■■□□□ 1.87
ATG4D-212ENST00000590096 TAF7LQ5H9L4 462 aa26.72■■□□□ 1.87
ATG4D-212ENST00000590096 ITPRIPQ8IWB1 547 aa26.72■■□□□ 1.87
ATG4D-212ENST00000590096 SUPT20HQ8NEM7 779 aa26.72■■□□□ 1.87
ATG4D-212ENST00000590096 MPHOSPH8Q99549 860 aa26.72■■□□□ 1.87
ATG4D-212ENST00000590096 ZNF277Q9NRM2 450 aaPredicted RBP26.72■■□□□ 1.87
ATG4D-212ENST00000590096 BSDC1Q9NW68 430 aaPredicted RBP26.72■■□□□ 1.87
ATG4D-212ENST00000590096 C1QTNF8P60827 252 aa26.71■■□□□ 1.87
ATG4D-212ENST00000590096 RABL6Q3YEC7 729 aaPredicted RBP26.71■■□□□ 1.87
ATG4D-212ENST00000590096 ANKRD44Q8N8A2 993 aa26.71■■□□□ 1.87
ATG4D-212ENST00000590096 NSFL1CQ9UNZ2 370 aaKnown RBP26.71■■□□□ 1.87
ATG4D-212ENST00000590096 RLBP1P12271 317 aa26.7■■□□□ 1.86
ATG4D-212ENST00000590096 DICER1Q9UPY3 1922 aaKnown RBP26.7■■□□□ 1.86
ATG4D-212ENST00000590096 PLIN1O60240 522 aa26.69■■□□□ 1.86
ATG4D-212ENST00000590096 IARSP41252 1262 aaKnown RBP26.69■■□□□ 1.86
ATG4D-212ENST00000590096 PANK1Q8TE04 598 aa26.69■■□□□ 1.86
ATG4D-212ENST00000590096 ANKIB1Q9P2G1 1089 aa26.69■■□□□ 1.86
ATG4D-212ENST00000590096 LRRFIP2Q9Y608 721 aaKnown RBP26.69■■□□□ 1.86
ATG4D-212ENST00000590096 TIAM2Q8IVF5 1701 aa26.68■■□□□ 1.86
ATG4D-212ENST00000590096 GPSM2P81274 684 aa26.68■■□□□ 1.86
ATG4D-212ENST00000590096 RTFDC1Q9BY42 306 aaPredicted RBP26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms