RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 ZSCAN22P10073 491 aaPredicted RBP22.93■■□□□ 1.26
PRKCSH-209ENST00000589838 KRT32Q14532 448 aa22.93■■□□□ 1.26
PRKCSH-209ENST00000589838 DBNDD2Q9BQY9 259 aa22.93■■□□□ 1.26
PRKCSH-209ENST00000589838 CPA1P15085 419 aa22.92■■□□□ 1.26
PRKCSH-209ENST00000589838 BLOC1S2Q6QNY1 142 aa22.92■■□□□ 1.26
PRKCSH-209ENST00000589838 SYAP1Q96A49 352 aaPredicted RBP22.92■■□□□ 1.26
PRKCSH-209ENST00000589838 STX6O43752 255 aa22.92■■□□□ 1.26
PRKCSH-209ENST00000589838 CIAO1O76071 339 aa22.92■■□□□ 1.26
PRKCSH-209ENST00000589838 NASPP49321 788 aaPredicted RBP22.92■■□□□ 1.26
PRKCSH-209ENST00000589838 TOGARAM1Q9Y4F4 1720 aa22.91■■□□□ 1.26
PRKCSH-209ENST00000589838 TAF5LO75529 589 aa22.91■■□□□ 1.26
PRKCSH-209ENST00000589838 TRIM28Q13263 835 aaKnown RBP22.91■■□□□ 1.26
PRKCSH-209ENST00000589838 TCIRG1Q13488 830 aa22.91■■□□□ 1.26
PRKCSH-209ENST00000589838 ATG9AQ7Z3C6 839 aa22.91■■□□□ 1.26
PRKCSH-209ENST00000589838 ISCA1Q9BUE6 129 aa22.91■■□□□ 1.26
PRKCSH-209ENST00000589838 KDM4FA0A1W2PPD8 638 aa22.9■■□□□ 1.26
PRKCSH-209ENST00000589838 USPL1Q5W0Q7 1092 aa22.9■■□□□ 1.26
PRKCSH-209ENST00000589838 FBXO3Q9UK99 471 aa22.9■■□□□ 1.26
PRKCSH-209ENST00000589838 EYA2O00167 538 aa22.9■■□□□ 1.26
PRKCSH-209ENST00000589838 STARD3NLO95772 234 aa22.9■■□□□ 1.26
PRKCSH-209ENST00000589838 SYT1P21579 422 aa22.9■■□□□ 1.26
PRKCSH-209ENST00000589838 KIF6Q6ZMV9 814 aa22.9■■□□□ 1.26
PRKCSH-209ENST00000589838 CCDC83Q8IWF9 413 aa22.9■■□□□ 1.26
PRKCSH-209ENST00000589838 DNAJC2Q99543 621 aaKnown RBP22.9■■□□□ 1.26
PRKCSH-209ENST00000589838 U3KPZ7 1027 aaPredicted RBP22.9■■□□□ 1.26
PRKCSH-209ENST00000589838 CCDC173Q0VFZ6 552 aa22.89■■□□□ 1.25
PRKCSH-209ENST00000589838 MCMDC2Q4G0Z9 681 aa22.89■■□□□ 1.25
PRKCSH-209ENST00000589838 KBTBD3Q8NAB2 608 aa22.89■■□□□ 1.25
PRKCSH-209ENST00000589838 TMEM87AQ8NBN3 555 aa22.89■■□□□ 1.25
PRKCSH-209ENST00000589838 RPS6KB1P23443 525 aa22.88■■□□□ 1.25
PRKCSH-209ENST00000589838 ZNF589Q86UQ0 364 aaPredicted RBP22.88■■□□□ 1.25
PRKCSH-209ENST00000589838 EDC3Q96F86 508 aaKnown RBP22.88■■□□□ 1.25
PRKCSH-209ENST00000589838 NEUROD6Q96NK8 337 aa22.88■■□□□ 1.25
PRKCSH-209ENST00000589838 LARP6Q9BRS8 491 aaKnown RBP22.88■■□□□ 1.25
PRKCSH-209ENST00000589838 GJB2P29033 226 aa22.88■■□□□ 1.25
PRKCSH-209ENST00000589838 LRSAM1Q6UWE0 723 aa22.88■■□□□ 1.25
PRKCSH-209ENST00000589838 TRIM44Q96DX7 344 aaPredicted RBP22.88■■□□□ 1.25
PRKCSH-209ENST00000589838 CHAMP1Q96JM3 812 aa22.88■■□□□ 1.25
PRKCSH-209ENST00000589838 PALLDQ8WX93 1383 aa22.87■■□□□ 1.25
PRKCSH-209ENST00000589838 LARGE1O95461 756 aa22.87■■□□□ 1.25
PRKCSH-209ENST00000589838 CSPP1Q1MSJ5 1256 aa22.87■■□□□ 1.25
PRKCSH-209ENST00000589838 BTG4Q9NY30 223 aa22.87■■□□□ 1.25
PRKCSH-209ENST00000589838 TMEM63CQ9P1W3 806 aa22.87■■□□□ 1.25
PRKCSH-209ENST00000589838 RBM27Q9P2N5 1060 aaKnown RBP22.87■■□□□ 1.25
PRKCSH-209ENST00000589838 COL14A1Q05707 1796 aaKnown RBP22.86■■□□□ 1.25
PRKCSH-209ENST00000589838 SH3TC1Q8TE82 1336 aa22.86■■□□□ 1.25
PRKCSH-209ENST00000589838 F13A1P00488 732 aa22.86■■□□□ 1.25
PRKCSH-209ENST00000589838 ME3Q16798 604 aa22.86■■□□□ 1.25
PRKCSH-209ENST00000589838 PIGBQ92521 554 aa22.86■■□□□ 1.25
PRKCSH-209ENST00000589838 ITGB4P16144 1822 aa22.86■■□□□ 1.25
PRKCSH-209ENST00000589838 SPEF2Q9C093 1822 aa22.86■■□□□ 1.25
PRKCSH-209ENST00000589838 PHF14O94880 888 aa22.85■■□□□ 1.25
PRKCSH-209ENST00000589838 CCDC57Q2TAC2 916 aa22.85■■□□□ 1.25
PRKCSH-209ENST00000589838 USP48Q86UV5 1035 aa22.85■■□□□ 1.25
PRKCSH-209ENST00000589838 HELLSQ9NRZ9 838 aa22.85■■□□□ 1.25
PRKCSH-209ENST00000589838 TCHHQ07283 1943 aa22.85■■□□□ 1.25
PRKCSH-209ENST00000589838 PCCAP05165 728 aaPredicted RBP22.85■■□□□ 1.25
PRKCSH-209ENST00000589838 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.85■■□□□ 1.25
PRKCSH-209ENST00000589838 PLA2G12BQ9BX93 195 aa22.85■■□□□ 1.25
PRKCSH-209ENST00000589838 PAG1Q9NWQ8 432 aa22.85■■□□□ 1.25
PRKCSH-209ENST00000589838 CEP126Q9P2H0 1117 aa22.85■■□□□ 1.25
PRKCSH-209ENST00000589838 ZNF609O15014 1411 aa22.85■■□□□ 1.25
PRKCSH-209ENST00000589838 PDCP20941 246 aa22.84■■□□□ 1.25
PRKCSH-209ENST00000589838 PPP1R9BQ96SB3 815 aa22.84■■□□□ 1.25
PRKCSH-209ENST00000589838 TPCN1Q9ULQ1 816 aa22.84■■□□□ 1.25
PRKCSH-209ENST00000589838 AKAP2Q9Y2D5 859 aa22.84■■□□□ 1.25
PRKCSH-209ENST00000589838 DDX46Q7L014 1031 aaKnown RBP22.83■■□□□ 1.25
PRKCSH-209ENST00000589838 DNAJC10Q8IXB1 793 aa22.83■■□□□ 1.25
PRKCSH-209ENST00000589838 ASAP1Q9ULH1 1129 aa22.83■■□□□ 1.25
PRKCSH-209ENST00000589838 PRIM1P49642 420 aaKnown RBP22.83■■□□□ 1.24
PRKCSH-209ENST00000589838 TIMM10P62072 90 aa22.83■■□□□ 1.24
PRKCSH-209ENST00000589838 LRRFIP1Q32MZ4 808 aaKnown RBP22.83■■□□□ 1.24
PRKCSH-209ENST00000589838 HSP90AB3PQ58FF7 597 aa22.83■■□□□ 1.24
PRKCSH-209ENST00000589838 NSFL1CQ9UNZ2 370 aaKnown RBP22.83■■□□□ 1.24
PRKCSH-209ENST00000589838 LRRC24Q50LG9 513 aa22.82■■□□□ 1.24
PRKCSH-209ENST00000589838 NEK1Q96PY6 1258 aa22.82■■□□□ 1.24
PRKCSH-209ENST00000589838 ZNF330Q9Y3S2 320 aaPredicted RBP22.82■■□□□ 1.24
PRKCSH-209ENST00000589838 LRP6O75581 1613 aa22.81■■□□□ 1.24
PRKCSH-209ENST00000589838 IFIT1P09914 478 aaKnown RBP22.81■■□□□ 1.24
PRKCSH-209ENST00000589838 ZBTB38Q8NAP3 1195 aaPredicted RBP22.81■■□□□ 1.24
PRKCSH-209ENST00000589838 MTMR6Q9Y217 621 aa22.81■■□□□ 1.24
PRKCSH-209ENST00000589838 MAP3K15Q6ZN16 1313 aa22.81■■□□□ 1.24
PRKCSH-209ENST00000589838 DISP2A7MBM2 1401 aa22.81■■□□□ 1.24
PRKCSH-209ENST00000589838 A0A1B0GUL7 405 aa22.81■■□□□ 1.24
PRKCSH-209ENST00000589838 SYCE3A1L190 88 aa22.81■■□□□ 1.24
PRKCSH-209ENST00000589838 GOLIM4O00461 696 aa22.81■■□□□ 1.24
PRKCSH-209ENST00000589838 FOXD4L6Q3SYB3 417 aaPredicted RBP22.81■■□□□ 1.24
PRKCSH-209ENST00000589838 FOXD4L3Q6VB84 417 aaPredicted RBP22.81■■□□□ 1.24
PRKCSH-209ENST00000589838 ZNF594Q96JF6 807 aaPredicted RBP22.81■■□□□ 1.24
PRKCSH-209ENST00000589838 HMGB1P09429 215 aaKnown RBP22.8■■□□□ 1.24
PRKCSH-209ENST00000589838 GIGYF2Q6Y7W6 1299 aaKnown RBP22.8■■□□□ 1.24
PRKCSH-209ENST00000589838 KLHL34Q8N239 644 aa22.8■■□□□ 1.24
PRKCSH-209ENST00000589838 NECAB1Q8N987 351 aa22.8■■□□□ 1.24
PRKCSH-209ENST00000589838 DSCC1Q9BVC3 393 aa22.8■■□□□ 1.24
PRKCSH-209ENST00000589838 RBSNQ9H1K0 784 aa22.8■■□□□ 1.24
PRKCSH-209ENST00000589838 RRAGDQ9NQL2 400 aaPredicted RBP22.8■■□□□ 1.24
PRKCSH-209ENST00000589838 NDUFB9Q9Y6M9 179 aa22.8■■□□□ 1.24
PRKCSH-209ENST00000589838 LETM1O95202 739 aaPredicted RBP22.79■■□□□ 1.24
PRKCSH-209ENST00000589838 UBE2HP62256 183 aa22.79■■□□□ 1.24
PRKCSH-209ENST00000589838 TOB2Q14106 344 aaPredicted RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms