RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
SMAD4-205ENST00000588745 TTC41PQ6P2S7 1318 aa14.01□□□□□ -0.17
SMAD4-205ENST00000588745 CASZ1Q86V15 1759 aa14.01□□□□□ -0.17
SMAD4-205ENST00000588745 FAM177BA6PVY3 158 aa14□□□□□ -0.17
SMAD4-205ENST00000588745 EYA2O00167 538 aa14□□□□□ -0.17
SMAD4-205ENST00000588745 APBA3O96018 575 aa14□□□□□ -0.17
SMAD4-205ENST00000588745 IFIT2P09913 472 aaKnown RBP14□□□□□ -0.17
SMAD4-205ENST00000588745 SDSP20132 328 aa14□□□□□ -0.17
SMAD4-205ENST00000588745 IL15P40933 162 aaPredicted RBP14□□□□□ -0.17
SMAD4-205ENST00000588745 IFIT5Q13325 482 aaKnown RBP14□□□□□ -0.17
SMAD4-205ENST00000588745 TBC1D9BQ66K14 1250 aa14□□□□□ -0.17
SMAD4-205ENST00000588745 ATG9AQ7Z3C6 839 aa14□□□□□ -0.17
SMAD4-205ENST00000588745 SEC24BO95487 1268 aa13.99□□□□□ -0.17
SMAD4-205ENST00000588745 SSFA2P28290 1259 aa13.99□□□□□ -0.17
SMAD4-205ENST00000588745 RFC4P35249 363 aa13.99□□□□□ -0.17
SMAD4-205ENST00000588745 TFCP2Q12800 502 aa13.99□□□□□ -0.17
SMAD4-205ENST00000588745 PROM2Q8N271 834 aa13.99□□□□□ -0.17
SMAD4-205ENST00000588745 PI4K2BQ8TCG2 481 aa13.99□□□□□ -0.17
SMAD4-205ENST00000588745 EAF2Q96CJ1 260 aaPredicted RBP13.99□□□□□ -0.17
SMAD4-205ENST00000588745 GPATCH3Q96I76 525 aa13.99□□□□□ -0.17
SMAD4-205ENST00000588745 ZNF594Q96JF6 807 aaPredicted RBP13.99□□□□□ -0.17
SMAD4-205ENST00000588745 CCDC85AQ96PX6 553 aaPredicted RBP13.99□□□□□ -0.17
SMAD4-205ENST00000588745 GREM2Q9H772 168 aa13.99□□□□□ -0.17
SMAD4-205ENST00000588745 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.99□□□□□ -0.17
SMAD4-205ENST00000588745 ZNF609O15014 1411 aa13.99□□□□□ -0.17
SMAD4-205ENST00000588745 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.98□□□□□ -0.17
SMAD4-205ENST00000588745 ANKRD18BA2A2Z9 1011 aa13.98□□□□□ -0.17
SMAD4-205ENST00000588745 HCLS1P14317 486 aaPredicted RBP13.98□□□□□ -0.17
SMAD4-205ENST00000588745 ITGA6P23229 1130 aa13.98□□□□□ -0.17
SMAD4-205ENST00000588745 TNNI3KQ59H18 835 aa13.98□□□□□ -0.17
SMAD4-205ENST00000588745 TAF7LQ5H9L4 462 aa13.98□□□□□ -0.17
SMAD4-205ENST00000588745 TBC1D9Q6ZT07 1266 aa13.98□□□□□ -0.17
SMAD4-205ENST00000588745 FPGT-TNNI3KV9GXZ4 949 aa13.98□□□□□ -0.17
SMAD4-205ENST00000588745 RTL9Q8NET4 1388 aa13.98□□□□□ -0.17
SMAD4-205ENST00000588745 RIC1Q4ADV7 1423 aa13.98□□□□□ -0.17
SMAD4-205ENST00000588745 AK9Q5TCS8 1911 aa13.98□□□□□ -0.17
SMAD4-205ENST00000588745 ERC2O15083 957 aa13.97□□□□□ -0.17
SMAD4-205ENST00000588745 LRRC24Q50LG9 513 aa13.97□□□□□ -0.17
SMAD4-205ENST00000588745 BICDL1Q6ZP65 573 aa13.97□□□□□ -0.17
SMAD4-205ENST00000588745 SETDB2Q96T68 719 aa13.97□□□□□ -0.17
SMAD4-205ENST00000588745 NYXQ9GZU5 481 aa13.97□□□□□ -0.17
SMAD4-205ENST00000588745 UPF2Q9HAU5 1272 aaKnown RBP13.97□□□□□ -0.17
SMAD4-205ENST00000588745 GPR108Q9NPR9 543 aa13.97□□□□□ -0.17
SMAD4-205ENST00000588745 ECHDC1Q9NTX5 307 aa13.97□□□□□ -0.17
SMAD4-205ENST00000588745 ABCC12Q96J65 1359 aa13.97□□□□□ -0.17
SMAD4-205ENST00000588745 GLRX3O76003 335 aaKnown RBP13.96□□□□□ -0.17
SMAD4-205ENST00000588745 ANP32AP39687 249 aaKnown RBP13.96□□□□□ -0.17
SMAD4-205ENST00000588745 PUS3Q9BZE2 481 aaKnown RBP13.96□□□□□ -0.17
SMAD4-205ENST00000588745 CCDC8Q9H0W5 538 aaPredicted RBP13.96□□□□□ -0.17
SMAD4-205ENST00000588745 TLR7Q9NYK1 1049 aaKnown RBP13.96□□□□□ -0.17
SMAD4-205ENST00000588745 CARMIL3Q8ND23 1372 aa13.96□□□□□ -0.17
SMAD4-205ENST00000588745 MFAP1P55081 439 aaKnown RBP13.96□□□□□ -0.18
SMAD4-205ENST00000588745 ERFEQ4G0M1 354 aa13.96□□□□□ -0.18
SMAD4-205ENST00000588745 CCDC152Q4G0S7 254 aa13.96□□□□□ -0.18
SMAD4-205ENST00000588745 SPEF2Q9C093 1822 aa13.95□□□□□ -0.18
SMAD4-205ENST00000588745 TNRC6CQ9HCJ0 1690 aaKnown RBP13.95□□□□□ -0.18
SMAD4-205ENST00000588745 TRIM6-TRIM34B2RNG4 842 aa13.95□□□□□ -0.18
SMAD4-205ENST00000588745 EIF5BO60841 1220 aaKnown RBP13.95□□□□□ -0.18
SMAD4-205ENST00000588745 ZNF827Q17R98 1081 aa13.95□□□□□ -0.18
SMAD4-205ENST00000588745 CASC1Q6TDU7 716 aa13.95□□□□□ -0.18
SMAD4-205ENST00000588745 NBPF5PQ86XG9 351 aaPredicted RBP13.95□□□□□ -0.18
SMAD4-205ENST00000588745 AKT1S1Q96B36 256 aa13.95□□□□□ -0.18
SMAD4-205ENST00000588745 DBNLQ9UJU6 430 aaKnown RBP13.95□□□□□ -0.18
SMAD4-205ENST00000588745 GYS1P13807 737 aa13.94□□□□□ -0.18
SMAD4-205ENST00000588745 GTF2E1P29083 439 aaPredicted RBP13.94□□□□□ -0.18
SMAD4-205ENST00000588745 SLC10A5Q5PT55 438 aa13.94□□□□□ -0.18
SMAD4-205ENST00000588745 CNTROBQ8N137 903 aa13.94□□□□□ -0.18
SMAD4-205ENST00000588745 CEP126Q9P2H0 1117 aa13.94□□□□□ -0.18
SMAD4-205ENST00000588745 ARAP2Q8WZ64 1704 aa13.93□□□□□ -0.18
SMAD4-205ENST00000588745 NFIXQ14938 502 aa13.93□□□□□ -0.18
SMAD4-205ENST00000588745 SF3B3Q15393 1217 aaKnown RBP13.93□□□□□ -0.18
SMAD4-205ENST00000588745 TPTE2Q6XPS3 522 aa13.93□□□□□ -0.18
SMAD4-205ENST00000588745 LDHAL6AQ6ZMR3 332 aa13.93□□□□□ -0.18
SMAD4-205ENST00000588745 RILPL2Q969X0 211 aa13.93□□□□□ -0.18
SMAD4-205ENST00000588745 TBC1D32Q96NH3 1257 aa13.93□□□□□ -0.18
SMAD4-205ENST00000588745 DBNDD2Q9BQY9 259 aa13.93□□□□□ -0.18
SMAD4-205ENST00000588745 CNNM1Q9NRU3 951 aa13.93□□□□□ -0.18
SMAD4-205ENST00000588745 RIPOR2Q9Y4F9 1068 aa13.93□□□□□ -0.18
SMAD4-205ENST00000588745 A0A1B0GUL6 1792 aa13.92□□□□□ -0.18
SMAD4-205ENST00000588745 COL4A1P02462 1669 aa13.92□□□□□ -0.18
SMAD4-205ENST00000588745 A0A1B0GUL7 405 aa13.92□□□□□ -0.18
SMAD4-205ENST00000588745 SEC31BQ9NQW1 1179 aa13.92□□□□□ -0.18
SMAD4-205ENST00000588745 TFCP2L1Q9NZI6 479 aa13.92□□□□□ -0.18
SMAD4-205ENST00000588745 AKAP2Q9Y2D5 859 aa13.92□□□□□ -0.18
SMAD4-205ENST00000588745 QSER1Q2KHR3 1735 aa13.91□□□□□ -0.18
SMAD4-205ENST00000588745 MAP4K4O95819 1239 aaPredicted RBP13.91□□□□□ -0.18
SMAD4-205ENST00000588745 ATP5JP18859 108 aa13.91□□□□□ -0.18
SMAD4-205ENST00000588745 METTL24Q5JXM2 366 aa13.91□□□□□ -0.18
SMAD4-205ENST00000588745 C3orf67Q6ZVT6 689 aa13.91□□□□□ -0.18
SMAD4-205ENST00000588745 VGLL2Q8N8G2 317 aa13.91□□□□□ -0.18
SMAD4-205ENST00000588745 FLAD1Q8NFF5 587 aa13.91□□□□□ -0.18
SMAD4-205ENST00000588745 MROH5Q6ZUA9 1318 aa13.9□□□□□ -0.18
SMAD4-205ENST00000588745 CHMLP26374 656 aa13.9□□□□□ -0.18
SMAD4-205ENST00000588745 IGHMBP2P38935 993 aaKnown RBP13.9□□□□□ -0.18
SMAD4-205ENST00000588745 CNBD1Q8NA66 436 aa13.9□□□□□ -0.18
SMAD4-205ENST00000588745 NEUROD6Q96NK8 337 aa13.9□□□□□ -0.18
SMAD4-205ENST00000588745 CDC5LQ99459 802 aaKnown RBP13.9□□□□□ -0.18
SMAD4-205ENST00000588745 MPHOSPH8Q99549 860 aa13.9□□□□□ -0.18
SMAD4-205ENST00000588745 C22orf23Q9BZE7 217 aa13.9□□□□□ -0.18
SMAD4-205ENST00000588745 ATP2B3Q16720 1220 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms