RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 C3orf67Q6ZVT6 689 aa28.15■■■□□ 2.1
ACTN4-210ENST00000588618 CENPQQ7L2Z9 268 aaPredicted RBP28.15■■■□□ 2.1
ACTN4-210ENST00000588618 NLRP3Q96P20 1036 aa28.15■■■□□ 2.1
ACTN4-210ENST00000588618 ZBTB7AO95365 584 aa28.14■■■□□ 2.1
ACTN4-210ENST00000588618 TTLL11Q8NHH1 800 aa28.14■■■□□ 2.1
ACTN4-210ENST00000588618 MTFR1LQ9H019 292 aa28.14■■■□□ 2.1
ACTN4-210ENST00000588618 RFX5P48382 616 aaPredicted RBP28.13■■■□□ 2.09
ACTN4-210ENST00000588618 CCDC85AQ96PX6 553 aaPredicted RBP28.13■■■□□ 2.09
ACTN4-210ENST00000588618 ANKRD31Q8N7Z5 1873 aa28.13■■■□□ 2.09
ACTN4-210ENST00000588618 CCDC152Q4G0S7 254 aa28.12■■■□□ 2.09
ACTN4-210ENST00000588618 SMC5Q8IY18 1101 aa28.12■■■□□ 2.09
ACTN4-210ENST00000588618 CCDC57Q2TAC2 916 aa28.12■■■□□ 2.09
ACTN4-210ENST00000588618 FAM161AQ3B820 660 aa28.12■■■□□ 2.09
ACTN4-210ENST00000588618 KLHDC4Q8TBB5 520 aa28.12■■■□□ 2.09
ACTN4-210ENST00000588618 DCTPP1Q9H773 170 aa28.12■■■□□ 2.09
ACTN4-210ENST00000588618 PA2G4Q9UQ80 394 aaKnown RBP28.12■■■□□ 2.09
ACTN4-210ENST00000588618 COL4A1P02462 1669 aa28.11■■■□□ 2.09
ACTN4-210ENST00000588618 TAF1P21675 1872 aa28.11■■■□□ 2.09
ACTN4-210ENST00000588618 POLD1P28340 1107 aa28.1■■■□□ 2.09
ACTN4-210ENST00000588618 IFIT5Q13325 482 aaKnown RBP28.1■■■□□ 2.09
ACTN4-210ENST00000588618 GREM2Q9H772 168 aa28.1■■■□□ 2.09
ACTN4-210ENST00000588618 TAF7LQ5H9L4 462 aa28.09■■■□□ 2.09
ACTN4-210ENST00000588618 EXOC6BQ9Y2D4 811 aa28.09■■■□□ 2.09
ACTN4-210ENST00000588618 PTPN12Q05209 780 aaKnown RBP28.08■■■□□ 2.09
ACTN4-210ENST00000588618 ATF5Q9Y2D1 282 aaPredicted RBP28.08■■■□□ 2.09
ACTN4-210ENST00000588618 RIC1Q4ADV7 1423 aa28.07■■■□□ 2.08
ACTN4-210ENST00000588618 ANKRD18BA2A2Z9 1011 aa28.07■■■□□ 2.08
ACTN4-210ENST00000588618 SKAP1Q86WV1 359 aa28.07■■■□□ 2.08
ACTN4-210ENST00000588618 GCC1Q96CN9 775 aa28.07■■■□□ 2.08
ACTN4-210ENST00000588618 ITGA6P23229 1130 aa28.06■■■□□ 2.08
ACTN4-210ENST00000588618 SF3B3Q15393 1217 aaKnown RBP28.06■■■□□ 2.08
ACTN4-210ENST00000588618 SPEF2Q9C093 1822 aa28.06■■■□□ 2.08
ACTN4-210ENST00000588618 SURF6O75683 361 aaKnown RBP28.06■■■□□ 2.08
ACTN4-210ENST00000588618 ZNF594Q96JF6 807 aaPredicted RBP28.06■■■□□ 2.08
ACTN4-210ENST00000588618 BRIP1Q9BX63 1249 aa28.06■■■□□ 2.08
ACTN4-210ENST00000588618 OS9Q13438 667 aaPredicted RBP28.05■■■□□ 2.08
ACTN4-210ENST00000588618 COPRSQ9NQ92 184 aa28.05■■■□□ 2.08
ACTN4-210ENST00000588618 NOP58Q9Y2X3 529 aaKnown RBP28.05■■■□□ 2.08
ACTN4-210ENST00000588618 HSP90AB4PQ58FF6 505 aa28.04■■■□□ 2.08
ACTN4-210ENST00000588618 PDE6BP35913 854 aa28.04■■■□□ 2.08
ACTN4-210ENST00000588618 RPGRQ92834 1020 aaKnown RBP28.04■■■□□ 2.08
ACTN4-210ENST00000588618 SEC31BQ9NQW1 1179 aa28.04■■■□□ 2.08
ACTN4-210ENST00000588618 ZBTB47Q9UFB7 747 aaPredicted RBP28.04■■■□□ 2.08
ACTN4-210ENST00000588618 LRP5O75197 1615 aa28.03■■■□□ 2.08
ACTN4-210ENST00000588618 RTL9Q8NET4 1388 aa28.03■■■□□ 2.08
ACTN4-210ENST00000588618 SIL1Q9H173 461 aa28.03■■■□□ 2.08
ACTN4-210ENST00000588618 PDZRN3Q9UPQ7 1066 aa28.03■■■□□ 2.08
ACTN4-210ENST00000588618 G3BP1Q13283 466 aaKnown RBP eCLIP28.02■■■□□ 2.082e-10■■□□□ 14.1
ACTN4-210ENST00000588618 DDX46Q7L014 1031 aaKnown RBP28.02■■■□□ 2.08
ACTN4-210ENST00000588618 CDC5LQ99459 802 aaKnown RBP28.02■■■□□ 2.08
ACTN4-210ENST00000588618 APBB1O00213 710 aa28.01■■■□□ 2.07
ACTN4-210ENST00000588618 SOCS7O14512 581 aa28.01■■■□□ 2.07
ACTN4-210ENST00000588618 COL11A2P13942 1736 aaPredicted RBP28.01■■■□□ 2.07
ACTN4-210ENST00000588618 IGHMBP2P38935 993 aaKnown RBP28■■■□□ 2.07
ACTN4-210ENST00000588618 NUCB1Q02818 461 aa28■■■□□ 2.07
ACTN4-210ENST00000588618 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28■■■□□ 2.07
ACTN4-210ENST00000588618 SMARCA5O60264 1052 aaPredicted RBP27.99■■■□□ 2.07
ACTN4-210ENST00000588618 ANKRD45Q5TZF3 282 aa27.99■■■□□ 2.07
ACTN4-210ENST00000588618 MPHOSPH8Q99549 860 aa27.99■■■□□ 2.07
ACTN4-210ENST00000588618 PUS3Q9BZE2 481 aaKnown RBP27.99■■■□□ 2.07
ACTN4-210ENST00000588618 RAB11FIP3O75154 756 aa27.98■■■□□ 2.07
ACTN4-210ENST00000588618 ERC1Q8IUD2 1116 aa27.98■■■□□ 2.07
ACTN4-210ENST00000588618 GOLGB1Q14789 3259 aaKnown RBP27.98■■■□□ 2.07
ACTN4-210ENST00000588618 CRY2Q49AN0 593 aa27.98■■■□□ 2.07
ACTN4-210ENST00000588618 LRRC24Q50LG9 513 aa27.98■■■□□ 2.07
ACTN4-210ENST00000588618 ATG9AQ7Z3C6 839 aa27.98■■■□□ 2.07
ACTN4-210ENST00000588618 ANKRD18AQ8IVF6 992 aa27.98■■■□□ 2.07
ACTN4-210ENST00000588618 RBM17Q96I25 401 aaKnown RBP27.98■■■□□ 2.07
ACTN4-210ENST00000588618 KLRG2A4D1S0 409 aaPredicted RBP27.97■■■□□ 2.07
ACTN4-210ENST00000588618 SASH1O94885 1247 aa27.97■■■□□ 2.07
ACTN4-210ENST00000588618 LDHAL6AQ6ZMR3 332 aa27.97■■■□□ 2.07
ACTN4-210ENST00000588618 CNNM1Q9NRU3 951 aa27.97■■■□□ 2.07
ACTN4-210ENST00000588618 FBXO3Q9UK99 471 aa27.97■■■□□ 2.07
ACTN4-210ENST00000588618 LNPKQ9C0E8 428 aa27.96■■■□□ 2.07
ACTN4-210ENST00000588618 SPON1Q9HCB6 807 aa27.96■■■□□ 2.07
ACTN4-210ENST00000588618 EYA2O00167 538 aa27.95■■■□□ 2.07
ACTN4-210ENST00000588618 CHD1LQ86WJ1 897 aa27.95■■■□□ 2.07
ACTN4-210ENST00000588618 LRRCC1Q9C099 1032 aa27.95■■■□□ 2.07
ACTN4-210ENST00000588618 H0YIN7 160 aa27.95■■■□□ 2.06
ACTN4-210ENST00000588618 PDE4AP27815 886 aa27.95■■■□□ 2.06
ACTN4-210ENST00000588618 RHPN1Q8TCX5 695 aa27.95■■■□□ 2.06
ACTN4-210ENST00000588618 KIF1BPQ96EK5 621 aa27.95■■■□□ 2.06
ACTN4-210ENST00000588618 BCL11AQ9H165 835 aa27.95■■■□□ 2.06
ACTN4-210ENST00000588618 A0A1B0GUL6 1792 aa27.94■■■□□ 2.06
ACTN4-210ENST00000588618 CIAO1O76071 339 aa27.94■■■□□ 2.06
ACTN4-210ENST00000588618 CELF1Q92879 486 aaKnown RBP27.94■■■□□ 2.06
ACTN4-210ENST00000588618 KIF13BQ9NQT8 1826 aa27.94■■■□□ 2.06
ACTN4-210ENST00000588618 C10orf71Q711Q0 1435 aa27.93■■■□□ 2.06
ACTN4-210ENST00000588618 NPR1P16066 1061 aa27.93■■■□□ 2.06
ACTN4-210ENST00000588618 IL15P40933 162 aaPredicted RBP27.93■■■□□ 2.06
ACTN4-210ENST00000588618 C2CD5Q86YS7 1000 aa27.93■■■□□ 2.06
ACTN4-210ENST00000588618 SGIP1Q9BQI5 828 aa27.93■■■□□ 2.06
ACTN4-210ENST00000588618 IL1RAPL2Q9NP60 686 aa27.93■■■□□ 2.06
ACTN4-210ENST00000588618 SRGNP10124 158 aa27.92■■■□□ 2.06
ACTN4-210ENST00000588618 RPS8P62241 208 aaKnown RBP27.92■■■□□ 2.06
ACTN4-210ENST00000588618 GRAPQ13588 217 aa27.92■■■□□ 2.06
ACTN4-210ENST00000588618 GRAPLQ8TC17 118 aaPredicted RBP27.92■■■□□ 2.06
ACTN4-210ENST00000588618 SRCAPQ6ZRS2 3230 aa27.92■■■□□ 2.06
ACTN4-210ENST00000588618 MASTLQ96GX5 879 aa27.92■■■□□ 2.06
ACTN4-210ENST00000588618 RIPOR2Q9Y4F9 1068 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms