RNA–Protein interactions for RNA: ENST00000588361.1

KDM4B-206, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-206ENST00000588361 SPC24Q8NBT2 197 aa18.23■□□□□ 0.51
KDM4B-206ENST00000588361 ZBTB22O15209 634 aa18.23■□□□□ 0.51
KDM4B-206ENST00000588361 TFCP2Q12800 502 aa18.23■□□□□ 0.51
KDM4B-206ENST00000588361 SEC62Q99442 399 aaKnown RBP18.23■□□□□ 0.51
KDM4B-206ENST00000588361 LRRC2Q9BYS8 371 aa18.23■□□□□ 0.51
KDM4B-206ENST00000588361 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.23■□□□□ 0.51
KDM4B-206ENST00000588361 SLFNL1Q499Z3 407 aa18.23■□□□□ 0.51
KDM4B-206ENST00000588361 ANKRD13DQ6ZTN6 518 aa18.23■□□□□ 0.51
KDM4B-206ENST00000588361 TTC5Q8N0Z6 440 aa18.23■□□□□ 0.51
KDM4B-206ENST00000588361 PRIMPOLQ96LW4 560 aa18.23■□□□□ 0.51
KDM4B-206ENST00000588361 ZSCAN31Q96LW9 406 aaPredicted RBP18.23■□□□□ 0.51
KDM4B-206ENST00000588361 SLC52A2Q9HAB3 445 aa18.22■□□□□ 0.51
KDM4B-206ENST00000588361 SH2B1Q9NRF2 756 aaPredicted RBP18.22■□□□□ 0.51
KDM4B-206ENST00000588361 ERBB3P21860 1342 aa18.21■□□□□ 0.51
KDM4B-206ENST00000588361 RIOK3O14730 519 aaKnown RBP18.21■□□□□ 0.51
KDM4B-206ENST00000588361 DDX46Q7L014 1031 aaKnown RBP18.21■□□□□ 0.51
KDM4B-206ENST00000588361 TATP17735 454 aaPredicted RBP18.21■□□□□ 0.51
KDM4B-206ENST00000588361 HMGN5P82970 282 aaKnown RBP18.21■□□□□ 0.51
KDM4B-206ENST00000588361 PYCARDQ9ULZ3 195 aa18.21■□□□□ 0.51
KDM4B-206ENST00000588361 ADGRL3Q9HAR2 1447 aa18.21■□□□□ 0.51
KDM4B-206ENST00000588361 PSMA5P28066 241 aa18.2■□□□□ 0.5
KDM4B-206ENST00000588361 TMEM87AQ8NBN3 555 aa18.2■□□□□ 0.5
KDM4B-206ENST00000588361 DDX11Q96FC9 970 aa18.2■□□□□ 0.5
KDM4B-206ENST00000588361 TM6SF1Q9BZW5 370 aa18.2■□□□□ 0.5
KDM4B-206ENST00000588361 DBNLQ9UJU6 430 aaKnown RBP18.2■□□□□ 0.5
KDM4B-206ENST00000588361 A0A087WZG4 1122 aa18.2■□□□□ 0.5
KDM4B-206ENST00000588361 RNF20Q5VTR2 975 aa18.2■□□□□ 0.5
KDM4B-206ENST00000588361 NPHP3Q7Z494 1330 aa18.2■□□□□ 0.5
KDM4B-206ENST00000588361 HSP90B1P14625 803 aaKnown RBP18.2■□□□□ 0.5
KDM4B-206ENST00000588361 NEUROD6Q96NK8 337 aa18.2■□□□□ 0.5
KDM4B-206ENST00000588361 DBNDD2Q9BQY9 259 aa18.2■□□□□ 0.5
KDM4B-206ENST00000588361 HIP1O00291 1037 aa18.19■□□□□ 0.5
KDM4B-206ENST00000588361 TTC6Q86TZ1 520 aa18.19■□□□□ 0.5
KDM4B-206ENST00000588361 CKAP2LQ8IYA6 745 aa18.19■□□□□ 0.5
KDM4B-206ENST00000588361 METTL22Q9BUU2 404 aaPredicted RBP18.19■□□□□ 0.5
KDM4B-206ENST00000588361 NAP1L2Q9ULW6 460 aaPredicted RBP18.19■□□□□ 0.5
KDM4B-206ENST00000588361 PHKG2P15735 406 aa18.19■□□□□ 0.5
KDM4B-206ENST00000588361 HEG1Q9ULI3 1381 aa18.19■□□□□ 0.5
KDM4B-206ENST00000588361 GOLGA6L4A6NEF3 574 aa18.18■□□□□ 0.5
KDM4B-206ENST00000588361 AP5Z1O43299 807 aa18.18■□□□□ 0.5
KDM4B-206ENST00000588361 JAK2O60674 1132 aa18.18■□□□□ 0.5
KDM4B-206ENST00000588361 GTPBP4Q9BZE4 634 aaKnown RBP18.18■□□□□ 0.5
KDM4B-206ENST00000588361 MED1Q15648 1581 aaPredicted RBP18.18■□□□□ 0.5
KDM4B-206ENST00000588361 CEBPZQ03701 1054 aaKnown RBP18.18■□□□□ 0.5
KDM4B-206ENST00000588361 CGNQ9P2M7 1197 aaKnown RBP18.18■□□□□ 0.5
KDM4B-206ENST00000588361 LIG1P18858 919 aa18.17■□□□□ 0.5
KDM4B-206ENST00000588361 RPS6KB1P23443 525 aa18.17■□□□□ 0.5
KDM4B-206ENST00000588361 FAM184AQ8NB25 1140 aa18.17■□□□□ 0.5
KDM4B-206ENST00000588361 GTF2F1P35269 517 aaKnown RBP eCLIP18.17■□□□□ 0.51e-6■■■■■ 28.5
KDM4B-206ENST00000588361 TOB2Q14106 344 aaPredicted RBP18.17■□□□□ 0.5
KDM4B-206ENST00000588361 NAA30Q147X3 362 aaPredicted RBP18.17■□□□□ 0.5
KDM4B-206ENST00000588361 TNNI3KQ59H18 835 aa18.17■□□□□ 0.5
KDM4B-206ENST00000588361 FPGT-TNNI3KV9GXZ4 949 aa18.17■□□□□ 0.5
KDM4B-206ENST00000588361 TAF5LO75529 589 aa18.17■□□□□ 0.5
KDM4B-206ENST00000588361 KRT85P78386 507 aa18.17■□□□□ 0.5
KDM4B-206ENST00000588361 PTPN12Q05209 780 aaKnown RBP18.17■□□□□ 0.5
KDM4B-206ENST00000588361 MAPK8IP2Q13387 824 aaPredicted RBP18.17■□□□□ 0.5
KDM4B-206ENST00000588361 ZNF330Q9Y3S2 320 aaPredicted RBP18.17■□□□□ 0.5
KDM4B-206ENST00000588361 LMBR1LQ6UX01 489 aa18.16■□□□□ 0.5
KDM4B-206ENST00000588361 KDM3BQ7LBC6 1761 aa18.16■□□□□ 0.5
KDM4B-206ENST00000588361 VGLL3A8MV65 326 aa18.16■□□□□ 0.5
KDM4B-206ENST00000588361 SNRPA1P09661 255 aaKnown RBP18.16■□□□□ 0.5
KDM4B-206ENST00000588361 GTF2E1P29083 439 aaPredicted RBP18.16■□□□□ 0.5
KDM4B-206ENST00000588361 UTYO14607 1347 aa18.15■□□□□ 0.5
KDM4B-206ENST00000588361 ZNF771Q7L3S4 317 aaPredicted RBP18.15■□□□□ 0.5
KDM4B-206ENST00000588361 IFNL2Q8IZJ0 200 aa18.15■□□□□ 0.5
KDM4B-206ENST00000588361 KCNB2Q92953 911 aa18.15■□□□□ 0.5
KDM4B-206ENST00000588361 KCNF1Q9H3M0 494 aa18.15■□□□□ 0.5
KDM4B-206ENST00000588361 KDM4AO75164 1064 aa18.15■□□□□ 0.5
KDM4B-206ENST00000588361 LETM1O95202 739 aaPredicted RBP18.15■□□□□ 0.5
KDM4B-206ENST00000588361 CABP4P57796 275 aa18.15■□□□□ 0.5
KDM4B-206ENST00000588361 CYP27B1O15528 508 aa18.15■□□□□ 0.5
KDM4B-206ENST00000588361 KIF20AO95235 890 aa18.15■□□□□ 0.5
KDM4B-206ENST00000588361 TIMM10P62072 90 aa18.15■□□□□ 0.5
KDM4B-206ENST00000588361 Q6ZUG5 572 aa18.14■□□□□ 0.49
KDM4B-206ENST00000588361 SPATA32Q96LK8 384 aa18.14■□□□□ 0.49
KDM4B-206ENST00000588361 DACT1Q9NYF0 836 aa18.14■□□□□ 0.49
KDM4B-206ENST00000588361 TAOK2Q9UL54 1235 aa18.14■□□□□ 0.49
KDM4B-206ENST00000588361 NCAPD2Q15021 1401 aa18.14■□□□□ 0.49
KDM4B-206ENST00000588361 UVSSAQ2YD98 709 aa18.13■□□□□ 0.49
KDM4B-206ENST00000588361 NEK1Q96PY6 1258 aa18.13■□□□□ 0.49
KDM4B-206ENST00000588361 GOLIM4O00461 696 aa18.13■□□□□ 0.49
KDM4B-206ENST00000588361 BRF1Q92994 677 aa18.13■□□□□ 0.49
KDM4B-206ENST00000588361 CCDC85AQ96PX6 553 aaPredicted RBP18.13■□□□□ 0.49
KDM4B-206ENST00000588361 COL15A1P39059 1388 aa18.13■□□□□ 0.49
KDM4B-206ENST00000588361 KDM6AO15550 1401 aaPredicted RBP18.12■□□□□ 0.49
KDM4B-206ENST00000588361 ANKRD1Q15327 319 aa18.12■□□□□ 0.49
KDM4B-206ENST00000588361 CHST3Q7LGC8 479 aa18.12■□□□□ 0.49
KDM4B-206ENST00000588361 FMNL2Q96PY5 1086 aa18.12■□□□□ 0.49
KDM4B-206ENST00000588361 H3BQV1 296 aa18.12■□□□□ 0.49
KDM4B-206ENST00000588361 ATF3P18847 181 aa18.12■□□□□ 0.49
KDM4B-206ENST00000588361 PDCP20941 246 aa18.12■□□□□ 0.49
KDM4B-206ENST00000588361 IFFO2Q5TF58 517 aa18.12■□□□□ 0.49
KDM4B-206ENST00000588361 LUZP1Q86V48 1076 aa18.12■□□□□ 0.49
KDM4B-206ENST00000588361 BICD2Q8TD16 824 aa18.12■□□□□ 0.49
KDM4B-206ENST00000588361 ZNF594Q96JF6 807 aaPredicted RBP18.12■□□□□ 0.49
KDM4B-206ENST00000588361 NUP62CLQ9H1M0 184 aa18.12■□□□□ 0.49
KDM4B-206ENST00000588361 ZBTB3Q9H5J0 574 aa18.12■□□□□ 0.49
KDM4B-206ENST00000588361 SPTLC3Q9NUV7 552 aa18.12■□□□□ 0.49
KDM4B-206ENST00000588361 A0A0G2JLW4 131 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms