RNA–Protein interactions for RNA: ENST00000587843.5

ROGDI-209, Transcript of rogdi homolog, humanhuman

TSL 2

Gene ROGDI, Length 1,362 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROGDI-209ENST00000587843 GRAPLQ8TC17 118 aaPredicted RBP31.07■■■□□ 2.56
ROGDI-209ENST00000587843 PPEF1O14829 653 aaPredicted RBP31.06■■■□□ 2.56
ROGDI-209ENST00000587843 TMC4Q7Z404 712 aa31.06■■■□□ 2.56
ROGDI-209ENST00000587843 GRM8O00222 908 aa31.05■■■□□ 2.56
ROGDI-209ENST00000587843 JARID2Q92833 1246 aaPredicted RBP31.05■■■□□ 2.56
ROGDI-209ENST00000587843 ZNF219Q9P2Y4 722 aaPredicted RBP31.05■■■□□ 2.56
ROGDI-209ENST00000587843 IPO8O15397 1037 aaKnown RBP31.05■■■□□ 2.56
ROGDI-209ENST00000587843 CTSWP56202 376 aa31.05■■■□□ 2.56
ROGDI-209ENST00000587843 RTKN2Q8IZC4 609 aa31.05■■■□□ 2.56
ROGDI-209ENST00000587843 NFKBIEO00221 500 aa31.04■■■□□ 2.56
ROGDI-209ENST00000587843 RTL9Q8NET4 1388 aa31.03■■■□□ 2.56
ROGDI-209ENST00000587843 SNED1Q8TER0 1413 aa31.03■■■□□ 2.56
ROGDI-209ENST00000587843 TMX4Q9H1E5 349 aaPredicted RBP31.03■■■□□ 2.56
ROGDI-209ENST00000587843 TAOK3Q9H2K8 898 aa31.03■■■□□ 2.56
ROGDI-209ENST00000587843 C9orf78Q9NZ63 289 aaPredicted RBP31.03■■■□□ 2.56
ROGDI-209ENST00000587843 SBF1O95248 1867 aa31.02■■■□□ 2.56
ROGDI-209ENST00000587843 CCT4P50991 539 aaKnown RBP31.02■■■□□ 2.56
ROGDI-209ENST00000587843 ATP6V0A2Q9Y487 856 aa31.02■■■□□ 2.56
ROGDI-209ENST00000587843 BCAR3O75815 825 aa31.01■■■□□ 2.55
ROGDI-209ENST00000587843 LMNB1P20700 586 aa31.01■■■□□ 2.55
ROGDI-209ENST00000587843 TTLL11Q8NHH1 800 aa31.01■■■□□ 2.55
ROGDI-209ENST00000587843 UTYO14607 1347 aa31.01■■■□□ 2.55
ROGDI-209ENST00000587843 RASSF7Q02833 373 aa31■■■□□ 2.55
ROGDI-209ENST00000587843 LRRC37AA6NMS7 1700 aa30.99■■■□□ 2.55
ROGDI-209ENST00000587843 FKBP4Q02790 459 aaKnown RBP eCLIP30.99■■■□□ 2.55
ROGDI-209ENST00000587843 SP8Q8IXZ3 490 aa30.99■■■□□ 2.55
ROGDI-209ENST00000587843 PSMD1Q99460 953 aa30.98■■■□□ 2.55
ROGDI-209ENST00000587843 TAF1P21675 1872 aa30.97■■■□□ 2.55
ROGDI-209ENST00000587843 ZC3H4Q9UPT8 1303 aaKnown RBP30.97■■■□□ 2.55
ROGDI-209ENST00000587843 CSF1RP07333 972 aa30.97■■■□□ 2.55
ROGDI-209ENST00000587843 C9orf131Q5VYM1 1079 aa30.97■■■□□ 2.55
ROGDI-209ENST00000587843 ATF7IPQ6VMQ6 1270 aa30.97■■■□□ 2.55
ROGDI-209ENST00000587843 CELF1Q92879 486 aaKnown RBP30.97■■■□□ 2.55
ROGDI-209ENST00000587843 RPS8P62241 208 aaKnown RBP30.96■■■□□ 2.55
ROGDI-209ENST00000587843 OLFM4Q6UX06 510 aa30.96■■■□□ 2.55
ROGDI-209ENST00000587843 RNF181Q9P0P0 153 aa30.96■■■□□ 2.55
ROGDI-209ENST00000587843 CDC5LQ99459 802 aaKnown RBP30.95■■■□□ 2.55
ROGDI-209ENST00000587843 TRIM27P14373 513 aa30.94■■■□□ 2.54
ROGDI-209ENST00000587843 ZKSCAN2Q63HK3 967 aa30.94■■■□□ 2.54
ROGDI-209ENST00000587843 FRAT1Q92837 279 aaPredicted RBP30.94■■■□□ 2.54
ROGDI-209ENST00000587843 SEC31BQ9NQW1 1179 aa30.94■■■□□ 2.54
ROGDI-209ENST00000587843 NBPF7P0C2Y1 421 aaPredicted RBP30.93■■■□□ 2.54
ROGDI-209ENST00000587843 GREM2Q9H772 168 aa30.93■■■□□ 2.54
ROGDI-209ENST00000587843 DICER1Q9UPY3 1922 aaKnown RBP30.93■■■□□ 2.54
ROGDI-209ENST00000587843 PRELPP51888 382 aa30.92■■■□□ 2.54
ROGDI-209ENST00000587843 FOXO4P98177 505 aa30.92■■■□□ 2.54
ROGDI-209ENST00000587843 INTS3Q68E01 1043 aaKnown RBP30.92■■■□□ 2.54
ROGDI-209ENST00000587843 CCDC85AQ96PX6 553 aaPredicted RBP30.92■■■□□ 2.54
ROGDI-209ENST00000587843 USP44Q9H0E7 712 aa30.92■■■□□ 2.54
ROGDI-209ENST00000587843 COL4A1P02462 1669 aa30.92■■■□□ 2.54
ROGDI-209ENST00000587843 CCDC88AQ3V6T2 1871 aa30.92■■■□□ 2.54
ROGDI-209ENST00000587843 ANKRD18AQ8IVF6 992 aa30.92■■■□□ 2.54
ROGDI-209ENST00000587843 TIAM2Q8IVF5 1701 aa30.9■■■□□ 2.54
ROGDI-209ENST00000587843 SUPT20HQ8NEM7 779 aa30.9■■■□□ 2.54
ROGDI-209ENST00000587843 RTFDC1Q9BY42 306 aaPredicted RBP30.9■■■□□ 2.54
ROGDI-209ENST00000587843 ITGA6P23229 1130 aa30.89■■■□□ 2.54
ROGDI-209ENST00000587843 FAM161AQ3B820 660 aa30.89■■■□□ 2.54
ROGDI-209ENST00000587843 MPNDQ8N594 471 aa30.89■■■□□ 2.54
ROGDI-209ENST00000587843 VPS33BQ9H267 617 aa30.89■■■□□ 2.54
ROGDI-209ENST00000587843 DPP8Q6V1X1 898 aaPredicted RBP30.88■■■□□ 2.53
ROGDI-209ENST00000587843 SUCLG2Q96I99 432 aa30.88■■■□□ 2.53
ROGDI-209ENST00000587843 HDAC5Q9UQL6 1122 aa30.88■■■□□ 2.53
ROGDI-209ENST00000587843 EPHA10Q5JZY3 1008 aa30.87■■■□□ 2.53
ROGDI-209ENST00000587843 LMBR1LQ6UX01 489 aa30.87■■■□□ 2.53
ROGDI-209ENST00000587843 BSDC1Q9NW68 430 aaPredicted RBP30.87■■■□□ 2.53
ROGDI-209ENST00000587843 ANKRD18BA2A2Z9 1011 aa30.86■■■□□ 2.53
ROGDI-209ENST00000587843 IGHMBP2P38935 993 aaKnown RBP30.86■■■□□ 2.53
ROGDI-209ENST00000587843 IARSP41252 1262 aaKnown RBP30.86■■■□□ 2.53
ROGDI-209ENST00000587843 RABL6Q3YEC7 729 aaPredicted RBP30.86■■■□□ 2.53
ROGDI-209ENST00000587843 SLC51AQ86UW1 340 aa30.86■■■□□ 2.53
ROGDI-209ENST00000587843 ZNF784Q8NCA9 323 aaPredicted RBP30.86■■■□□ 2.53
ROGDI-209ENST00000587843 KAZALD1Q96I82 304 aa30.86■■■□□ 2.53
ROGDI-209ENST00000587843 YTHDC1Q96MU7 727 aaKnown RBP30.86■■■□□ 2.53
ROGDI-209ENST00000587843 ZNF277Q9NRM2 450 aaPredicted RBP30.86■■■□□ 2.53
ROGDI-209ENST00000587843 RCAN3Q9UKA8 241 aa30.86■■■□□ 2.53
ROGDI-209ENST00000587843 LTBP1Q14766 1721 aa30.86■■■□□ 2.53
ROGDI-209ENST00000587843 IFIT5Q13325 482 aaKnown RBP30.85■■■□□ 2.53
ROGDI-209ENST00000587843 PODXL2Q9NZ53 605 aa30.84■■■□□ 2.53
ROGDI-209ENST00000587843 DUOX1Q9NRD9 1551 aa30.84■■■□□ 2.53
ROGDI-209ENST00000587843 CHMP3Q9Y3E7 222 aa30.83■■■□□ 2.53
ROGDI-209ENST00000587843 UBTFL1P0CB47 393 aaPredicted RBP30.82■■■□□ 2.52
ROGDI-209ENST00000587843 CCDC57Q2TAC2 916 aa30.82■■■□□ 2.52
ROGDI-209ENST00000587843 BICC1Q9H694 974 aaKnown RBP30.82■■■□□ 2.52
ROGDI-209ENST00000587843 SPEF2Q9C093 1822 aa30.82■■■□□ 2.52
ROGDI-209ENST00000587843 FTSJ3Q8IY81 847 aaKnown RBP30.81■■■□□ 2.52
ROGDI-209ENST00000587843 CLUAP1Q96AJ1 413 aa30.81■■■□□ 2.52
ROGDI-209ENST00000587843 MPHOSPH8Q99549 860 aa30.81■■■□□ 2.52
ROGDI-209ENST00000587843 NSFL1CQ9UNZ2 370 aaKnown RBP30.81■■■□□ 2.52
ROGDI-209ENST00000587843 GNAI3P08754 354 aa30.8■■■□□ 2.52
ROGDI-209ENST00000587843 DZIP1LQ8IYY4 767 aaKnown RBP30.8■■■□□ 2.52
ROGDI-209ENST00000587843 TNNQ9UQP3 1299 aa30.8■■■□□ 2.52
ROGDI-209ENST00000587843 MS4A1P11836 297 aa30.79■■■□□ 2.52
ROGDI-209ENST00000587843 GPSM2P81274 684 aa30.79■■■□□ 2.52
ROGDI-209ENST00000587843 ANKRD44Q8N8A2 993 aa30.79■■■□□ 2.52
ROGDI-209ENST00000587843 JDP2Q8WYK2 163 aa30.79■■■□□ 2.52
ROGDI-209ENST00000587843 XDHP47989 1333 aa30.78■■■□□ 2.52
ROGDI-209ENST00000587843 LARGE2Q8N3Y3 721 aa30.78■■■□□ 2.52
ROGDI-209ENST00000587843 TMEM57Q8N5G2 664 aa30.78■■■□□ 2.52
ROGDI-209ENST00000587843 MEIS3Q99687 375 aa30.78■■■□□ 2.52
ROGDI-209ENST00000587843 ANKIB1Q9P2G1 1089 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms