RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 DPP8Q6V1X1 898 aaPredicted RBP18.22■□□□□ 0.51
HDAC5-203ENST00000586339 CLEC11AQ9Y240 323 aa18.22■□□□□ 0.51
HDAC5-203ENST00000586339 DUOX1Q9NRD9 1551 aa18.21■□□□□ 0.51
HDAC5-203ENST00000586339 CNTNAP1P78357 1384 aa18.21■□□□□ 0.51
HDAC5-203ENST00000586339 TMEM88BA6NKF7 163 aa18.21■□□□□ 0.51
HDAC5-203ENST00000586339 GOLGA2Q08379 1002 aa18.21■□□□□ 0.51
HDAC5-203ENST00000586339 MPNDQ8N594 471 aa18.21■□□□□ 0.51
HDAC5-203ENST00000586339 MYH3P11055 1940 aa18.2■□□□□ 0.5
HDAC5-203ENST00000586339 HSPA1AP0DMV8 641 aaKnown RBP18.2■□□□□ 0.5
HDAC5-203ENST00000586339 HSPA1BP0DMV9 641 aaKnown RBP18.2■□□□□ 0.5
HDAC5-203ENST00000586339 KIAA2012Q0VF49 1180 aa18.2■□□□□ 0.5
HDAC5-203ENST00000586339 SF3B3Q15393 1217 aaKnown RBP18.2■□□□□ 0.5
HDAC5-203ENST00000586339 ZNRF3Q9ULT6 936 aa18.2■□□□□ 0.5
HDAC5-203ENST00000586339 CDHR2Q9BYE9 1310 aa18.2■□□□□ 0.5
HDAC5-203ENST00000586339 ATP5J2-PTCD1G3V325 749 aa18.19■□□□□ 0.5
HDAC5-203ENST00000586339 HSP90B1P14625 803 aaKnown RBP18.19■□□□□ 0.5
HDAC5-203ENST00000586339 USP50Q70EL3 339 aaPredicted RBP18.19■□□□□ 0.5
HDAC5-203ENST00000586339 CNTROBQ8N137 903 aa18.19■□□□□ 0.5
HDAC5-203ENST00000586339 FAM89AQ96GI7 184 aa18.19■□□□□ 0.5
HDAC5-203ENST00000586339 MAP1SQ66K74 1059 aaPredicted RBP18.18■□□□□ 0.5
HDAC5-203ENST00000586339 RIC3Q7Z5B4 369 aa18.18■□□□□ 0.5
HDAC5-203ENST00000586339 MKRN1Q9UHC7 482 aaKnown RBP18.18■□□□□ 0.5
HDAC5-203ENST00000586339 EPS15P42566 896 aa18.17■□□□□ 0.5
HDAC5-203ENST00000586339 CCDC27Q2M243 656 aa18.17■□□□□ 0.5
HDAC5-203ENST00000586339 CCDC30Q5VVM6 783 aa18.17■□□□□ 0.5
HDAC5-203ENST00000586339 ZBTB38Q8NAP3 1195 aaPredicted RBP18.17■□□□□ 0.5
HDAC5-203ENST00000586339 GPRC5DQ9NZD1 345 aa18.17■□□□□ 0.5
HDAC5-203ENST00000586339 IRS4O14654 1257 aaPredicted RBP18.16■□□□□ 0.5
HDAC5-203ENST00000586339 CXCL9Q07325 125 aa18.16■□□□□ 0.5
HDAC5-203ENST00000586339 PHAXQ9H814 394 aaKnown RBP18.16■□□□□ 0.5
HDAC5-203ENST00000586339 ADARB2Q9NS39 739 aaKnown RBP18.16■□□□□ 0.5
HDAC5-203ENST00000586339 ELL2O00472 640 aaPredicted RBP18.15■□□□□ 0.5
HDAC5-203ENST00000586339 DDX58O95786 925 aaKnown RBP18.15■□□□□ 0.5
HDAC5-203ENST00000586339 NCBP3Q53F19 620 aaKnown RBP18.15■□□□□ 0.5
HDAC5-203ENST00000586339 COL13A1Q5TAT6 717 aaPredicted RBP18.15■□□□□ 0.5
HDAC5-203ENST00000586339 CIAPIN1Q6FI81 312 aa18.15■□□□□ 0.5
HDAC5-203ENST00000586339 C8orf58Q8NAV2 365 aa18.15■□□□□ 0.5
HDAC5-203ENST00000586339 CCDC191Q8NCU4 936 aa18.15■□□□□ 0.5
HDAC5-203ENST00000586339 COL4A1P02462 1669 aa18.15■□□□□ 0.5
HDAC5-203ENST00000586339 RASSF10A6NK89 507 aa18.14■□□□□ 0.49
HDAC5-203ENST00000586339 TNIP1Q15025 636 aa18.14■□□□□ 0.49
HDAC5-203ENST00000586339 CELF1Q92879 486 aaKnown RBP18.14■□□□□ 0.49
HDAC5-203ENST00000586339 PSME4Q14997 1843 aa18.14■□□□□ 0.49
HDAC5-203ENST00000586339 PCCAP05165 728 aaPredicted RBP18.13■□□□□ 0.49
HDAC5-203ENST00000586339 RTL5Q5HYW3 569 aaPredicted RBP18.13■□□□□ 0.49
HDAC5-203ENST00000586339 ZNF428Q96B54 188 aa18.13■□□□□ 0.49
HDAC5-203ENST00000586339 MYD88Q99836 296 aa18.13■□□□□ 0.49
HDAC5-203ENST00000586339 METTL22Q9BUU2 404 aaPredicted RBP18.13■□□□□ 0.49
HDAC5-203ENST00000586339 THSD7BQ9C0I4 1608 aa18.12■□□□□ 0.49
HDAC5-203ENST00000586339 GMPSP49915 693 aaPredicted RBP18.12■□□□□ 0.49
HDAC5-203ENST00000586339 CWC25Q9NXE8 425 aaPredicted RBP18.12■□□□□ 0.49
HDAC5-203ENST00000586339 IL16Q14005 1332 aa18.12■□□□□ 0.49
HDAC5-203ENST00000586339 SCN9AQ15858 1988 aa18.11■□□□□ 0.49
HDAC5-203ENST00000586339 ZNF316A6NFI3 1004 aaPredicted RBP18.11■□□□□ 0.49
HDAC5-203ENST00000586339 VEGFBP49765 207 aa18.11■□□□□ 0.49
HDAC5-203ENST00000586339 RPS8P62241 208 aaKnown RBP18.11■□□□□ 0.49
HDAC5-203ENST00000586339 WASHC4Q2M389 1173 aa18.11■□□□□ 0.49
HDAC5-203ENST00000586339 CCDC184Q52MB2 194 aa18.11■□□□□ 0.49
HDAC5-203ENST00000586339 EYA3Q99504 573 aa18.11■□□□□ 0.49
HDAC5-203ENST00000586339 BCL2L13Q9BXK5 485 aa18.11■□□□□ 0.49
HDAC5-203ENST00000586339 NSFL1CQ9UNZ2 370 aaKnown RBP18.11■□□□□ 0.49
HDAC5-203ENST00000586339 POLR2AP24928 1970 aaKnown RBP18.1■□□□□ 0.49
HDAC5-203ENST00000586339 YDJCA8MPS7 323 aa18.1■□□□□ 0.49
HDAC5-203ENST00000586339 PDE8AO60658 829 aa18.1■□□□□ 0.49
HDAC5-203ENST00000586339 RAD17O75943 681 aa18.1■□□□□ 0.49
HDAC5-203ENST00000586339 DEFB115Q30KQ5 88 aa18.1■□□□□ 0.49
HDAC5-203ENST00000586339 CCDC152Q4G0S7 254 aa18.1■□□□□ 0.49
HDAC5-203ENST00000586339 WWC1Q8IX03 1113 aa18.1■□□□□ 0.49
HDAC5-203ENST00000586339 TSPYL6Q8N831 410 aa18.1■□□□□ 0.49
HDAC5-203ENST00000586339 ZC3H15Q8WU90 426 aaKnown RBP18.1■□□□□ 0.49
HDAC5-203ENST00000586339 STK31Q9BXU1 1019 aa18.1■□□□□ 0.49
HDAC5-203ENST00000586339 SPEF2Q9C093 1822 aa18.09■□□□□ 0.49
HDAC5-203ENST00000586339 KSR2Q6VAB6 950 aa18.09■□□□□ 0.49
HDAC5-203ENST00000586339 TNS4Q8IZW8 715 aa18.09■□□□□ 0.49
HDAC5-203ENST00000586339 TSR2Q969E8 191 aaKnown RBP18.09■□□□□ 0.49
HDAC5-203ENST00000586339 PODXL2Q9NZ53 605 aa18.09■□□□□ 0.49
HDAC5-203ENST00000586339 PGAP2Q9UHJ9 254 aa18.09■□□□□ 0.49
HDAC5-203ENST00000586339 ABT1Q9ULW3 272 aaKnown RBP18.09■□□□□ 0.49
HDAC5-203ENST00000586339 C6orf229H3BNL8 230 aa18.08■□□□□ 0.48
HDAC5-203ENST00000586339 GPSM2P81274 684 aa18.08■□□□□ 0.48
HDAC5-203ENST00000586339 DPF2Q92785 391 aa18.08■□□□□ 0.48
HDAC5-203ENST00000586339 POLLQ9UGP5 575 aa18.08■□□□□ 0.48
HDAC5-203ENST00000586339 MAP3K2Q9Y2U5 619 aa18.08■□□□□ 0.48
HDAC5-203ENST00000586339 RPS12P25398 132 aaKnown RBP18.07■□□□□ 0.48
HDAC5-203ENST00000586339 NEXNQ0ZGT2 675 aa18.07■□□□□ 0.48
HDAC5-203ENST00000586339 TWISTNBQ3B726 338 aaPredicted RBP18.07■□□□□ 0.48
HDAC5-203ENST00000586339 TBC1D16Q8TBP0 767 aa18.07■□□□□ 0.48
HDAC5-203ENST00000586339 AIDAQ96BJ3 306 aa18.07■□□□□ 0.48
HDAC5-203ENST00000586339 MRS2Q9HD23 443 aa18.07■□□□□ 0.48
HDAC5-203ENST00000586339 WDR33Q9C0J8 1336 aaKnown RBP18.06■□□□□ 0.48
HDAC5-203ENST00000586339 PI4KAP2A4QPH2 592 aa18.06■□□□□ 0.48
HDAC5-203ENST00000586339 H7C1D1 291 aa18.06■□□□□ 0.48
HDAC5-203ENST00000586339 ANP32CO43423 234 aa18.06■□□□□ 0.48
HDAC5-203ENST00000586339 PI4KAP1Q8N8J0 262 aa18.06■□□□□ 0.48
HDAC5-203ENST00000586339 DBNDD1Q9H9R9 158 aa18.06■□□□□ 0.48
HDAC5-203ENST00000586339 SEC31BQ9NQW1 1179 aa18.06■□□□□ 0.48
HDAC5-203ENST00000586339 WBP1LQ9NX94 342 aa18.06■□□□□ 0.48
HDAC5-203ENST00000586339 CNOT7Q9UIV1 285 aaKnown RBP18.06■□□□□ 0.48
HDAC5-203ENST00000586339 ZNF609O15014 1411 aa18.06■□□□□ 0.48
HDAC5-203ENST00000586339 TRAF5O00463 557 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 403.6 ms