RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 UTP14AQ9BVJ6 771 aaKnown RBP11.17□□□□□ -0.62
SRSF1-207ENST00000584668 RTFDC1Q9BY42 306 aaPredicted RBP11.17□□□□□ -0.62
SRSF1-207ENST00000584668 RRP7AQ9Y3A4 280 aaKnown RBP11.17□□□□□ -0.62
SRSF1-207ENST00000584668 ABCC4O15439 1325 aa11.16□□□□□ -0.62
SRSF1-207ENST00000584668 NTSR2O95665 410 aa11.16□□□□□ -0.62
SRSF1-207ENST00000584668 CXCL9Q07325 125 aa11.16□□□□□ -0.62
SRSF1-207ENST00000584668 KIAA2012Q0VF49 1180 aa11.16□□□□□ -0.62
SRSF1-207ENST00000584668 DCTN1Q14203 1278 aa11.16□□□□□ -0.62
SRSF1-207ENST00000584668 SUSD4Q5VX71 490 aa11.16□□□□□ -0.62
SRSF1-207ENST00000584668 GIGYF2Q6Y7W6 1299 aaKnown RBP11.16□□□□□ -0.62
SRSF1-207ENST00000584668 DDX46Q7L014 1031 aaKnown RBP11.16□□□□□ -0.62
SRSF1-207ENST00000584668 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
SRSF1-207ENST00000584668 C2orf69Q8N8R5 385 aa11.16□□□□□ -0.62
SRSF1-207ENST00000584668 PNNQ9H307 717 aaKnown RBP11.16□□□□□ -0.62
SRSF1-207ENST00000584668 PGAP2Q9UHJ9 254 aa11.16□□□□□ -0.62
SRSF1-207ENST00000584668 LRRC37AA6NMS7 1700 aa11.15□□□□□ -0.62
SRSF1-207ENST00000584668 RGMBQ6NW40 437 aa11.15□□□□□ -0.62
SRSF1-207ENST00000584668 SP8Q8IXZ3 490 aa11.15□□□□□ -0.62
SRSF1-207ENST00000584668 ZNF34Q8IZ26 560 aa11.15□□□□□ -0.62
SRSF1-207ENST00000584668 MAPK8IP3Q9UPT6 1336 aa11.14□□□□□ -0.63
SRSF1-207ENST00000584668 RAD17O75943 681 aa11.14□□□□□ -0.63
SRSF1-207ENST00000584668 PRPF38BQ5VTL8 546 aaKnown RBP11.14□□□□□ -0.63
SRSF1-207ENST00000584668 TTLL7Q6ZT98 887 aa11.14□□□□□ -0.63
SRSF1-207ENST00000584668 MICALL2Q8IY33 904 aa11.14□□□□□ -0.63
SRSF1-207ENST00000584668 DCPSQ96C86 337 aaKnown RBP11.14□□□□□ -0.63
SRSF1-207ENST00000584668 CNOT7Q9UIV1 285 aaKnown RBP11.14□□□□□ -0.63
SRSF1-207ENST00000584668 RPS12P25398 132 aaKnown RBP11.13□□□□□ -0.63
SRSF1-207ENST00000584668 ZNF157P51786 506 aaPredicted RBP11.13□□□□□ -0.63
SRSF1-207ENST00000584668 GRAPQ13588 217 aa11.13□□□□□ -0.63
SRSF1-207ENST00000584668 KRT26Q7Z3Y9 468 aa11.13□□□□□ -0.63
SRSF1-207ENST00000584668 GRAPLQ8TC17 118 aaPredicted RBP11.13□□□□□ -0.63
SRSF1-207ENST00000584668 DPF2Q92785 391 aa11.13□□□□□ -0.63
SRSF1-207ENST00000584668 GBA2Q9HCG7 927 aaPredicted RBP11.13□□□□□ -0.63
SRSF1-207ENST00000584668 EIF4A1P60842 406 aaKnown RBP11.12□□□□□ -0.63
SRSF1-207ENST00000584668 SLC10A5Q5PT55 438 aa11.12□□□□□ -0.63
SRSF1-207ENST00000584668 USP48Q86UV5 1035 aa11.12□□□□□ -0.63
SRSF1-207ENST00000584668 SULF1Q8IWU6 871 aa11.12□□□□□ -0.63
SRSF1-207ENST00000584668 TRPM4Q8TD43 1214 aa11.12□□□□□ -0.63
SRSF1-207ENST00000584668 EYA3Q99504 573 aa11.12□□□□□ -0.63
SRSF1-207ENST00000584668 MIS18AQ9NYP9 233 aa11.12□□□□□ -0.63
SRSF1-207ENST00000584668 SH3TC1Q8TE82 1336 aa11.11□□□□□ -0.63
SRSF1-207ENST00000584668 POLR2AP24928 1970 aaKnown RBP11.11□□□□□ -0.63
SRSF1-207ENST00000584668 PPP2R1AP30153 589 aa11.11□□□□□ -0.63
SRSF1-207ENST00000584668 SOX10P56693 466 aa11.11□□□□□ -0.63
SRSF1-207ENST00000584668 PKN2Q16513 984 aaKnown RBP11.11□□□□□ -0.63
SRSF1-207ENST00000584668 WASHC4Q2M389 1173 aa11.11□□□□□ -0.63
SRSF1-207ENST00000584668 CTU1Q7Z7A3 348 aaKnown RBP11.11□□□□□ -0.63
SRSF1-207ENST00000584668 TSPYL4Q9UJ04 414 aa11.11□□□□□ -0.63
SRSF1-207ENST00000584668 G3V3G9 751 aa11.1□□□□□ -0.63
SRSF1-207ENST00000584668 DCAF8Q5TAQ9 597 aa11.1□□□□□ -0.63
SRSF1-207ENST00000584668 C3orf67Q6ZVT6 689 aa11.1□□□□□ -0.63
SRSF1-207ENST00000584668 GCC1Q96CN9 775 aa11.1□□□□□ -0.63
SRSF1-207ENST00000584668 TRMT112Q9UI30 125 aaKnown RBP11.1□□□□□ -0.63
SRSF1-207ENST00000584668 DUOX1Q9NRD9 1551 aa11.1□□□□□ -0.63
SRSF1-207ENST00000584668 PAPPA2Q9BXP8 1791 aa11.1□□□□□ -0.63
SRSF1-207ENST00000584668 TRPA1O75762 1119 aa11.09□□□□□ -0.63
SRSF1-207ENST00000584668 SLC10A3P09131 477 aa11.09□□□□□ -0.63
SRSF1-207ENST00000584668 HSP90B1P14625 803 aaKnown RBP11.09□□□□□ -0.63
SRSF1-207ENST00000584668 HIRAP54198 1017 aaPredicted RBP11.09□□□□□ -0.63
SRSF1-207ENST00000584668 FKBP1BP68106 108 aa11.09□□□□□ -0.63
SRSF1-207ENST00000584668 KIF23Q02241 960 aaPredicted RBP11.09□□□□□ -0.63
SRSF1-207ENST00000584668 LMOD3Q0VAK6 560 aa11.09□□□□□ -0.63
SRSF1-207ENST00000584668 NFE2L2Q16236 605 aa11.09□□□□□ -0.63
SRSF1-207ENST00000584668 KIF4BQ2VIQ3 1234 aa11.09□□□□□ -0.63
SRSF1-207ENST00000584668 TBC1D10BQ4KMP7 808 aaPredicted RBP11.09□□□□□ -0.63
SRSF1-207ENST00000584668 RNF186Q9NXI6 227 aa11.09□□□□□ -0.63
SRSF1-207ENST00000584668 HDAC9Q9UKV0 1011 aa11.09□□□□□ -0.63
SRSF1-207ENST00000584668 FAM155AB1AL88 458 aaPredicted RBP11.08□□□□□ -0.64
SRSF1-207ENST00000584668 C6orf229H3BNL8 230 aa11.08□□□□□ -0.64
SRSF1-207ENST00000584668 PSMD14O00487 310 aa11.08□□□□□ -0.64
SRSF1-207ENST00000584668 EIF2S2P20042 333 aaKnown RBP11.08□□□□□ -0.64
SRSF1-207ENST00000584668 SAMD7Q7Z3H4 446 aa11.08□□□□□ -0.64
SRSF1-207ENST00000584668 BABAM1Q9NWV8 329 aa11.08□□□□□ -0.64
SRSF1-207ENST00000584668 NSFL1CQ9UNZ2 370 aaKnown RBP11.08□□□□□ -0.64
SRSF1-207ENST00000584668 TAF1P21675 1872 aa11.08□□□□□ -0.64
SRSF1-207ENST00000584668 PSME4Q14997 1843 aa11.07□□□□□ -0.64
SRSF1-207ENST00000584668 YDJCA8MPS7 323 aa11.07□□□□□ -0.64
SRSF1-207ENST00000584668 HCLS1P14317 486 aaPredicted RBP11.07□□□□□ -0.64
SRSF1-207ENST00000584668 NLRP10Q86W26 655 aa11.07□□□□□ -0.64
SRSF1-207ENST00000584668 DBNDD1Q9H9R9 158 aa11.07□□□□□ -0.64
SRSF1-207ENST00000584668 GGA3Q9NZ52 723 aa11.07□□□□□ -0.64
SRSF1-207ENST00000584668 ZBTB12Q9Y330 459 aaPredicted RBP11.07□□□□□ -0.64
SRSF1-207ENST00000584668 ADM5C9JUS6 153 aa11.06□□□□□ -0.64
SRSF1-207ENST00000584668 ECE2O60344 883 aa11.06□□□□□ -0.64
SRSF1-207ENST00000584668 TCIRG1Q13488 830 aa11.06□□□□□ -0.64
SRSF1-207ENST00000584668 RBM26Q5T8P6 1007 aaKnown RBP11.06□□□□□ -0.64
SRSF1-207ENST00000584668 SLC51AQ86UW1 340 aa11.06□□□□□ -0.64
SRSF1-207ENST00000584668 POTEDQ86YR6 584 aa11.06□□□□□ -0.64
SRSF1-207ENST00000584668 ZC3H12CQ9C0D7 883 aaKnown RBP11.06□□□□□ -0.64
SRSF1-207ENST00000584668 ZNF609O15014 1411 aa11.05□□□□□ -0.64
SRSF1-207ENST00000584668 NF2P35240 595 aa11.05□□□□□ -0.64
SRSF1-207ENST00000584668 AIMP1Q12904 312 aaKnown RBP11.05□□□□□ -0.64
SRSF1-207ENST00000584668 NECTIN2Q92692 538 aa11.05□□□□□ -0.64
SRSF1-207ENST00000584668 CDCA5Q96FF9 252 aa11.05□□□□□ -0.64
SRSF1-207ENST00000584668 ZIC5Q96T25 663 aa11.05□□□□□ -0.64
SRSF1-207ENST00000584668 THUMPD2Q9BTF0 503 aaKnown RBP11.05□□□□□ -0.64
SRSF1-207ENST00000584668 HPS5Q9UPZ3 1129 aa11.05□□□□□ -0.64
SRSF1-207ENST00000584668 PITPNM2Q9BZ72 1349 aa11.05□□□□□ -0.64
SRSF1-207ENST00000584668 SHTN1A0MZ66 631 aa11.04□□□□□ -0.64
SRSF1-207ENST00000584668 RIMBP2O15034 1052 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms