RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 LINS1Q8NG48 757 aa20.23■□□□□ 0.83
CSNK1D-223ENST00000584472 RBM46Q8TBY0 533 aaKnown RBP20.23■□□□□ 0.83
CSNK1D-223ENST00000584472 NMRK2Q9NPI5 230 aa20.23■□□□□ 0.83
CSNK1D-223ENST00000584472 TNNQ9UQP3 1299 aa20.23■□□□□ 0.83
CSNK1D-223ENST00000584472 DICER1Q9UPY3 1922 aaKnown RBP20.23■□□□□ 0.83
CSNK1D-223ENST00000584472 TIAM2Q8IVF5 1701 aa20.22■□□□□ 0.83
CSNK1D-223ENST00000584472 C21orf2O43822 256 aa20.22■□□□□ 0.83
CSNK1D-223ENST00000584472 C7orf43Q8WVR3 580 aa20.22■□□□□ 0.83
CSNK1D-223ENST00000584472 RBM17Q96I25 401 aaKnown RBP20.22■□□□□ 0.83
CSNK1D-223ENST00000584472 CRAMP1Q96RY5 1269 aa20.22■□□□□ 0.83
CSNK1D-223ENST00000584472 GLTPD2A6NH11 291 aa20.21■□□□□ 0.83
CSNK1D-223ENST00000584472 IRS4O14654 1257 aaPredicted RBP20.21■□□□□ 0.83
CSNK1D-223ENST00000584472 PRELPP51888 382 aa20.21■□□□□ 0.83
CSNK1D-223ENST00000584472 CWF19L2Q2TBE0 894 aaKnown RBP20.21■□□□□ 0.83
CSNK1D-223ENST00000584472 TAOK3Q9H2K8 898 aa20.21■□□□□ 0.83
CSNK1D-223ENST00000584472 CDHR2Q9BYE9 1310 aa20.21■□□□□ 0.83
CSNK1D-223ENST00000584472 FSTL1Q12841 308 aa20.2■□□□□ 0.82
CSNK1D-223ENST00000584472 ABCC4O15439 1325 aa20.2■□□□□ 0.82
CSNK1D-223ENST00000584472 GCKRQ14397 625 aa20.19■□□□□ 0.82
CSNK1D-223ENST00000584472 SF3B3Q15393 1217 aaKnown RBP20.19■□□□□ 0.82
CSNK1D-223ENST00000584472 RTL5Q5HYW3 569 aaPredicted RBP20.19■□□□□ 0.82
CSNK1D-223ENST00000584472 CLUAP1Q96AJ1 413 aa20.19■□□□□ 0.82
CSNK1D-223ENST00000584472 CCDC88AQ3V6T2 1871 aa20.18■□□□□ 0.82
CSNK1D-223ENST00000584472 GRIPAP1Q4V328 841 aa20.18■□□□□ 0.82
CSNK1D-223ENST00000584472 CCDC93Q567U6 631 aa20.18■□□□□ 0.82
CSNK1D-223ENST00000584472 BEND3Q5T5X7 828 aa20.18■□□□□ 0.82
CSNK1D-223ENST00000584472 SLC4A10Q6U841 1118 aa20.18■□□□□ 0.82
CSNK1D-223ENST00000584472 C16orf71Q8IYS4 520 aaPredicted RBP20.18■□□□□ 0.82
CSNK1D-223ENST00000584472 DZIP1LQ8IYY4 767 aaKnown RBP20.18■□□□□ 0.82
CSNK1D-223ENST00000584472 H7C1W4 665 aa20.17■□□□□ 0.82
CSNK1D-223ENST00000584472 MS4A1P11836 297 aa20.17■□□□□ 0.82
CSNK1D-223ENST00000584472 CC2D2BQ6DHV5 1058 aa20.17■□□□□ 0.82
CSNK1D-223ENST00000584472 DPY19L2Q6NUT2 758 aa20.17■□□□□ 0.82
CSNK1D-223ENST00000584472 DDX46Q7L014 1031 aaKnown RBP20.17■□□□□ 0.82
CSNK1D-223ENST00000584472 FTSJ3Q8IY81 847 aaKnown RBP20.17■□□□□ 0.82
CSNK1D-223ENST00000584472 RTKN2Q8IZC4 609 aa20.17■□□□□ 0.82
CSNK1D-223ENST00000584472 WDR90Q96KV7 1748 aa20.16■□□□□ 0.82
CSNK1D-223ENST00000584472 MYH3P11055 1940 aa20.16■□□□□ 0.82
CSNK1D-223ENST00000584472 PDE8AO60658 829 aa20.16■□□□□ 0.82
CSNK1D-223ENST00000584472 ALDH1L1O75891 902 aa20.16■□□□□ 0.82
CSNK1D-223ENST00000584472 RLBP1P12271 317 aa20.16■□□□□ 0.82
CSNK1D-223ENST00000584472 VEGFAP15692 232 aaPredicted RBP20.16■□□□□ 0.82
CSNK1D-223ENST00000584472 APLP1P51693 650 aa20.16■□□□□ 0.82
CSNK1D-223ENST00000584472 PDE3AQ14432 1141 aa20.16■□□□□ 0.82
CSNK1D-223ENST00000584472 UBE3BQ7Z3V4 1068 aa20.16■□□□□ 0.82
CSNK1D-223ENST00000584472 CCT4P50991 539 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-223ENST00000584472 C20orf194Q5TEA3 1177 aa20.15■□□□□ 0.82
CSNK1D-223ENST00000584472 INTS3Q68E01 1043 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-223ENST00000584472 TMEM57Q8N5G2 664 aa20.15■□□□□ 0.82
CSNK1D-223ENST00000584472 PANK1Q8TE04 598 aa20.15■□□□□ 0.82
CSNK1D-223ENST00000584472 ZNF219Q9P2Y4 722 aaPredicted RBP20.15■□□□□ 0.82
CSNK1D-223ENST00000584472 SNED1Q8TER0 1413 aa20.15■□□□□ 0.82
CSNK1D-223ENST00000584472 PPEF1O14829 653 aaPredicted RBP20.14■□□□□ 0.81
CSNK1D-223ENST00000584472 BBOX1O75936 387 aa20.14■□□□□ 0.81
CSNK1D-223ENST00000584472 FKBP4Q02790 459 aaKnown RBP eCLIP20.14■□□□□ 0.81
CSNK1D-223ENST00000584472 GRAPQ13588 217 aa20.14■□□□□ 0.81
CSNK1D-223ENST00000584472 TMC4Q7Z404 712 aa20.14■□□□□ 0.81
CSNK1D-223ENST00000584472 GRAPLQ8TC17 118 aaPredicted RBP20.14■□□□□ 0.81
CSNK1D-223ENST00000584472 SRCIN1Q9C0H9 1055 aa20.14■□□□□ 0.81
CSNK1D-223ENST00000584472 CASP7P55210 303 aa20.13■□□□□ 0.81
CSNK1D-223ENST00000584472 CCDC152Q4G0S7 254 aa20.13■□□□□ 0.81
CSNK1D-223ENST00000584472 JARID2Q92833 1246 aaPredicted RBP20.13■□□□□ 0.81
CSNK1D-223ENST00000584472 PLA2G12BQ9BX93 195 aa20.13■□□□□ 0.81
CSNK1D-223ENST00000584472 RRAGCQ9HB90 399 aa20.13■□□□□ 0.81
CSNK1D-223ENST00000584472 RTL9Q8NET4 1388 aa20.12■□□□□ 0.81
CSNK1D-223ENST00000584472 CTSWP56202 376 aa20.12■□□□□ 0.81
CSNK1D-223ENST00000584472 SMC1BQ8NDV3 1235 aa20.12■□□□□ 0.81
CSNK1D-223ENST00000584472 PSMD1Q99460 953 aa20.12■□□□□ 0.81
CSNK1D-223ENST00000584472 ATP6V0A2Q9Y487 856 aa20.12■□□□□ 0.81
CSNK1D-223ENST00000584472 LRRC37AA6NMS7 1700 aa20.12■□□□□ 0.81
CSNK1D-223ENST00000584472 GRM8O00222 908 aa20.11■□□□□ 0.81
CSNK1D-223ENST00000584472 TAF1P21675 1872 aa20.11■□□□□ 0.81
CSNK1D-223ENST00000584472 OLFM4Q6UX06 510 aa20.1■□□□□ 0.81
CSNK1D-223ENST00000584472 TMX4Q9H1E5 349 aaPredicted RBP20.1■□□□□ 0.81
CSNK1D-223ENST00000584472 MVPQ14764 893 aaKnown RBP20.09■□□□□ 0.81
CSNK1D-223ENST00000584472 ITPRIPQ8IWB1 547 aa20.09■□□□□ 0.81
CSNK1D-223ENST00000584472 SP8Q8IXZ3 490 aa20.09■□□□□ 0.81
CSNK1D-223ENST00000584472 TTLL11Q8NHH1 800 aa20.09■□□□□ 0.81
CSNK1D-223ENST00000584472 C9orf78Q9NZ63 289 aaPredicted RBP20.09■□□□□ 0.81
CSNK1D-223ENST00000584472 COG6Q9Y2V7 657 aa20.09■□□□□ 0.81
CSNK1D-223ENST00000584472 UTYO14607 1347 aa20.08■□□□□ 0.81
CSNK1D-223ENST00000584472 L3MBTL3Q96JM7 780 aaPredicted RBP20.08■□□□□ 0.81
CSNK1D-223ENST00000584472 COL4A1P02462 1669 aa20.07■□□□□ 0.8
CSNK1D-223ENST00000584472 POTECB2RU33 542 aa20.07■□□□□ 0.8
CSNK1D-223ENST00000584472 RPS8P62241 208 aaKnown RBP20.07■□□□□ 0.8
CSNK1D-223ENST00000584472 CELF1Q92879 486 aaKnown RBP20.07■□□□□ 0.8
CSNK1D-223ENST00000584472 IQCA1LA6NCM1 817 aa20.06■□□□□ 0.8
CSNK1D-223ENST00000584472 CSF1RP07333 972 aa20.06■□□□□ 0.8
CSNK1D-223ENST00000584472 CDC5LQ99459 802 aaKnown RBP20.06■□□□□ 0.8
CSNK1D-223ENST00000584472 USP44Q9H0E7 712 aa20.06■□□□□ 0.8
CSNK1D-223ENST00000584472 VPS33BQ9H267 617 aa20.06■□□□□ 0.8
CSNK1D-223ENST00000584472 SEC31BQ9NQW1 1179 aa20.06■□□□□ 0.8
CSNK1D-223ENST00000584472 DDX19BQ9UMR2 479 aa20.06■□□□□ 0.8
CSNK1D-223ENST00000584472 SCN4AP35499 1836 aa20.06■□□□□ 0.8
CSNK1D-223ENST00000584472 ZBTB7BO15156 539 aaPredicted RBP20.05■□□□□ 0.8
CSNK1D-223ENST00000584472 CRBNQ96SW2 442 aa20.05■□□□□ 0.8
CSNK1D-223ENST00000584472 GREM2Q9H772 168 aa20.05■□□□□ 0.8
CSNK1D-223ENST00000584472 FZD9O00144 591 aa20.04■□□□□ 0.8
CSNK1D-223ENST00000584472 IARSP41252 1262 aaKnown RBP20.04■□□□□ 0.8
CSNK1D-223ENST00000584472 FOXO4P98177 505 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms