RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 HS1BP3Q53T59 392 aa15.78■□□□□ 0.12
CSNK1D-222ENST00000584377 EDC3Q96F86 508 aaKnown RBP15.78■□□□□ 0.12
CSNK1D-222ENST00000584377 NOL7Q9UMY1 257 aaKnown RBP15.78■□□□□ 0.12
CSNK1D-222ENST00000584377 CNPY2Q9Y2B0 182 aa15.78■□□□□ 0.12
CSNK1D-222ENST00000584377 ATP6V1DQ9Y5K8 247 aa15.78■□□□□ 0.12
CSNK1D-222ENST00000584377 ATP5JP18859 108 aa15.78■□□□□ 0.12
CSNK1D-222ENST00000584377 ME3Q16798 604 aa15.78■□□□□ 0.12
CSNK1D-222ENST00000584377 UTP14CQ5TAP6 766 aaKnown RBP15.78■□□□□ 0.12
CSNK1D-222ENST00000584377 DMTNQ08495 405 aa15.77■□□□□ 0.12
CSNK1D-222ENST00000584377 ZNF589Q86UQ0 364 aaPredicted RBP15.77■□□□□ 0.12
CSNK1D-222ENST00000584377 PHF14O94880 888 aa15.77■□□□□ 0.12
CSNK1D-222ENST00000584377 CASP7P55210 303 aa15.77■□□□□ 0.11
CSNK1D-222ENST00000584377 PRDM11Q9NQV5 511 aa15.77■□□□□ 0.11
CSNK1D-222ENST00000584377 TPCN1Q9ULQ1 816 aa15.77■□□□□ 0.11
CSNK1D-222ENST00000584377 PCDH11XQ9BZA7 1347 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 PCDH11YQ9BZA8 1340 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 NBPF26B4DH59 902 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 DTNBO60941 627 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 PDE4CQ08493 712 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 ST3GAL1Q11201 340 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 NBPF14Q5TI25 921 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 NBPF10Q6P3W6 841 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 BLOC1S2Q6QNY1 142 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 TOM1L2Q6ZVM7 507 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 NBPF15Q8N660 670 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 NECAB1Q8N987 351 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 PDLIM2Q96JY6 352 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 TSPY26PQ9H489 355 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 ARFGEF2Q9Y6D5 1785 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 AFDNP55196 1824 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 LMBR1LQ6UX01 489 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 RNF214Q8ND24 703 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 ZCRB1Q8TBF4 217 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 WDR17Q8IZU2 1322 aa15.76■□□□□ 0.11
CSNK1D-222ENST00000584377 TCHHQ07283 1943 aa15.75■□□□□ 0.11
CSNK1D-222ENST00000584377 COL9A3Q14050 684 aaPredicted RBP15.75■□□□□ 0.11
CSNK1D-222ENST00000584377 BRINP3Q76B58 766 aa15.75■□□□□ 0.11
CSNK1D-222ENST00000584377 DBNDD2Q9BQY9 259 aa15.75■□□□□ 0.11
CSNK1D-222ENST00000584377 HMG20BQ9P0W2 317 aa15.75■□□□□ 0.11
CSNK1D-222ENST00000584377 MTMR6Q9Y217 621 aa15.75■□□□□ 0.11
CSNK1D-222ENST00000584377 GLI3P10071 1580 aa15.75■□□□□ 0.11
CSNK1D-222ENST00000584377 TAF5LO75529 589 aa15.75■□□□□ 0.11
CSNK1D-222ENST00000584377 CHMP3Q9Y3E7 222 aa15.75■□□□□ 0.11
CSNK1D-222ENST00000584377 NDUFB9Q9Y6M9 179 aa15.75■□□□□ 0.11
CSNK1D-222ENST00000584377 JCADQ9P266 1359 aa15.75■□□□□ 0.11
CSNK1D-222ENST00000584377 FIBPO43427 364 aa15.74■□□□□ 0.11
CSNK1D-222ENST00000584377 ANKRD1Q15327 319 aa15.74■□□□□ 0.11
CSNK1D-222ENST00000584377 DNAJC2Q99543 621 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-222ENST00000584377 TAF6LQ9Y6J9 622 aa15.74■□□□□ 0.11
CSNK1D-222ENST00000584377 ZSCAN20P17040 1043 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-222ENST00000584377 RPS6KB1P23443 525 aa15.74■□□□□ 0.11
CSNK1D-222ENST00000584377 UBE2HP62256 183 aa15.74■□□□□ 0.11
CSNK1D-222ENST00000584377 TCEANC2Q96MN5 208 aa15.74■□□□□ 0.11
CSNK1D-222ENST00000584377 PARP4Q9UKK3 1724 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-222ENST00000584377 VPS37CA5D8V6 355 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-222ENST00000584377 H7C1W4 665 aa15.73■□□□□ 0.11
CSNK1D-222ENST00000584377 HSPA2P54652 639 aa15.73■□□□□ 0.11
CSNK1D-222ENST00000584377 TTLL7Q6ZT98 887 aa15.73■□□□□ 0.11
CSNK1D-222ENST00000584377 CCDC94Q9BW85 323 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-222ENST00000584377 LAMB4A4D0S4 1761 aa15.73■□□□□ 0.11
CSNK1D-222ENST00000584377 ERVV-2B6SEH9 535 aa15.73■□□□□ 0.11
CSNK1D-222ENST00000584377 TPRNQ4KMQ1 711 aa15.73■□□□□ 0.11
CSNK1D-222ENST00000584377 CWC25Q9NXE8 425 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-222ENST00000584377 FOXO4P98177 505 aa15.73■□□□□ 0.11
CSNK1D-222ENST00000584377 CSPP1Q1MSJ5 1256 aa15.73■□□□□ 0.11
CSNK1D-222ENST00000584377 TSGA10IPQ3SY00 556 aa15.73■□□□□ 0.11
CSNK1D-222ENST00000584377 CCDC183Q5T5S1 534 aa15.73■□□□□ 0.11
CSNK1D-222ENST00000584377 HAUS7Q99871 368 aa15.73■□□□□ 0.11
CSNK1D-222ENST00000584377 DNM1Q05193 864 aaKnown RBP15.72■□□□□ 0.11
CSNK1D-222ENST00000584377 USPL1Q5W0Q7 1092 aa15.72■□□□□ 0.11
CSNK1D-222ENST00000584377 RFX7Q2KHR2 1363 aa15.72■□□□□ 0.11
CSNK1D-222ENST00000584377 A1BGP04217 495 aa15.72■□□□□ 0.11
CSNK1D-222ENST00000584377 KRT32Q14532 448 aa15.71■□□□□ 0.11
CSNK1D-222ENST00000584377 LARP1BQ659C4 914 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-222ENST00000584377 DDX46Q7L014 1031 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-222ENST00000584377 ALDH8A1Q9H2A2 487 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-222ENST00000584377 CCDC9Q9Y3X0 531 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-222ENST00000584377 TOB2Q14106 344 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-222ENST00000584377 SASS6Q6UVJ0 657 aa15.71■□□□□ 0.11
CSNK1D-222ENST00000584377 ZBTB3Q9H5J0 574 aa15.71■□□□□ 0.11
CSNK1D-222ENST00000584377 ZKSCAN5Q9Y2L8 839 aa15.71■□□□□ 0.11
CSNK1D-222ENST00000584377 ZNF609O15014 1411 aa15.71■□□□□ 0.1
CSNK1D-222ENST00000584377 CHGBP05060 677 aa15.7■□□□□ 0.1
CSNK1D-222ENST00000584377 PDIA4P13667 645 aaKnown RBP15.7■□□□□ 0.1
CSNK1D-222ENST00000584377 IL2RBP14784 551 aa15.7■□□□□ 0.1
CSNK1D-222ENST00000584377 PDCP20941 246 aa15.7■□□□□ 0.1
CSNK1D-222ENST00000584377 MCMDC2Q4G0Z9 681 aa15.7■□□□□ 0.1
CSNK1D-222ENST00000584377 CCDC129Q6ZRS4 1044 aa15.7■□□□□ 0.1
CSNK1D-222ENST00000584377 ATG9AQ7Z3C6 839 aa15.7■□□□□ 0.1
CSNK1D-222ENST00000584377 BBXQ8WY36 941 aaPredicted RBP15.7■□□□□ 0.1
CSNK1D-222ENST00000584377 NEUROD6Q96NK8 337 aa15.7■□□□□ 0.1
CSNK1D-222ENST00000584377 SEC62Q99442 399 aaKnown RBP15.7■□□□□ 0.1
CSNK1D-222ENST00000584377 NKX1-1Q15270 411 aaPredicted RBP15.69■□□□□ 0.1
CSNK1D-222ENST00000584377 U3KPZ7 1027 aaPredicted RBP15.69■□□□□ 0.1
CSNK1D-222ENST00000584377 COL5A2P05997 1499 aaPredicted RBP15.69■□□□□ 0.1
CSNK1D-222ENST00000584377 LETM1O95202 739 aaPredicted RBP15.69■□□□□ 0.1
CSNK1D-222ENST00000584377 KBTBD3Q8NAB2 608 aa15.69■□□□□ 0.1
CSNK1D-222ENST00000584377 CCDC191Q8NCU4 936 aa15.69■□□□□ 0.1
CSNK1D-222ENST00000584377 NEK1Q96PY6 1258 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms