RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 MSL1Q68DK7 614 aa20.79■□□□□ 0.92
CDK5RAP3-230ENST00000584042 TTLL11Q8NHH1 800 aa20.79■□□□□ 0.92
CDK5RAP3-230ENST00000584042 NPHP1O15259 732 aa20.78■□□□□ 0.92
CDK5RAP3-230ENST00000584042 RFX5P48382 616 aaPredicted RBP20.78■□□□□ 0.92
CDK5RAP3-230ENST00000584042 FAM161AQ3B820 660 aa20.78■□□□□ 0.92
CDK5RAP3-230ENST00000584042 COPRSQ9NQ92 184 aa20.78■□□□□ 0.92
CDK5RAP3-230ENST00000584042 PARP3Q9Y6F1 533 aa20.78■□□□□ 0.92
CDK5RAP3-230ENST00000584042 SF3B3Q15393 1217 aaKnown RBP20.77■□□□□ 0.92
CDK5RAP3-230ENST00000584042 CCDC152Q4G0S7 254 aa20.77■□□□□ 0.92
CDK5RAP3-230ENST00000584042 NOP58Q9Y2X3 529 aaKnown RBP20.77■□□□□ 0.92
CDK5RAP3-230ENST00000584042 CHMP3Q9Y3E7 222 aa20.77■□□□□ 0.92
CDK5RAP3-230ENST00000584042 HSP90AB4PQ58FF6 505 aa20.76■□□□□ 0.91
CDK5RAP3-230ENST00000584042 PDGFDQ9GZP0 370 aaPredicted RBP20.76■□□□□ 0.91
CDK5RAP3-230ENST00000584042 SPEF2Q9C093 1822 aa20.76■□□□□ 0.91
CDK5RAP3-230ENST00000584042 COL11A2P13942 1736 aaPredicted RBP20.75■□□□□ 0.91
CDK5RAP3-230ENST00000584042 PTPN12Q05209 780 aaKnown RBP20.75■□□□□ 0.91
CDK5RAP3-230ENST00000584042 CCDC57Q2TAC2 916 aa20.75■□□□□ 0.91
CDK5RAP3-230ENST00000584042 NLRP3Q96P20 1036 aa20.75■□□□□ 0.91
CDK5RAP3-230ENST00000584042 GREM2Q9H772 168 aa20.75■□□□□ 0.91
CDK5RAP3-230ENST00000584042 C10orf71Q711Q0 1435 aa20.75■□□□□ 0.91
CDK5RAP3-230ENST00000584042 KIF13BQ9NQT8 1826 aa20.74■□□□□ 0.91
CDK5RAP3-230ENST00000584042 IFIT5Q13325 482 aaKnown RBP20.74■□□□□ 0.91
CDK5RAP3-230ENST00000584042 R3HDM1Q15032 1099 aaKnown RBP20.74■□□□□ 0.91
CDK5RAP3-230ENST00000584042 FBXO3Q9UK99 471 aa20.74■□□□□ 0.91
CDK5RAP3-230ENST00000584042 A0A1B0GUL6 1792 aa20.73■□□□□ 0.91
CDK5RAP3-230ENST00000584042 ANKRD18BA2A2Z9 1011 aa20.73■□□□□ 0.91
CDK5RAP3-230ENST00000584042 RAB11FIP3O75154 756 aa20.73■□□□□ 0.91
CDK5RAP3-230ENST00000584042 SURF6O75683 361 aaKnown RBP20.73■□□□□ 0.91
CDK5RAP3-230ENST00000584042 ITGA6P23229 1130 aa20.73■□□□□ 0.91
CDK5RAP3-230ENST00000584042 C3orf67Q6ZVT6 689 aa20.73■□□□□ 0.91
CDK5RAP3-230ENST00000584042 MTFR1LQ9H019 292 aa20.73■□□□□ 0.91
CDK5RAP3-230ENST00000584042 EXOC6BQ9Y2D4 811 aa20.73■□□□□ 0.91
CDK5RAP3-230ENST00000584042 NUCB1Q02818 461 aa20.72■□□□□ 0.91
CDK5RAP3-230ENST00000584042 ERC1Q8IUD2 1116 aa20.72■□□□□ 0.91
CDK5RAP3-230ENST00000584042 PA2G4Q9UQ80 394 aaKnown RBP20.72■□□□□ 0.91
CDK5RAP3-230ENST00000584042 DLEC1Q9Y238 1755 aa20.72■□□□□ 0.91
CDK5RAP3-230ENST00000584042 COL4A1P02462 1669 aa20.71■□□□□ 0.91
CDK5RAP3-230ENST00000584042 CIAO1O76071 339 aa20.71■□□□□ 0.91
CDK5RAP3-230ENST00000584042 CRY2Q49AN0 593 aa20.71■□□□□ 0.91
CDK5RAP3-230ENST00000584042 CCDC85AQ96PX6 553 aaPredicted RBP20.71■□□□□ 0.91
CDK5RAP3-230ENST00000584042 BRIP1Q9BX63 1249 aa20.71■□□□□ 0.91
CDK5RAP3-230ENST00000584042 KLRG2A4D1S0 409 aaPredicted RBP20.7■□□□□ 0.9
CDK5RAP3-230ENST00000584042 TAF7LQ5H9L4 462 aa20.7■□□□□ 0.9
CDK5RAP3-230ENST00000584042 CCDC24Q8N4L8 307 aa20.7■□□□□ 0.9
CDK5RAP3-230ENST00000584042 KLHDC4Q8TBB5 520 aa20.7■□□□□ 0.9
CDK5RAP3-230ENST00000584042 KIF1BPQ96EK5 621 aa20.7■□□□□ 0.9
CDK5RAP3-230ENST00000584042 CDC5LQ99459 802 aaKnown RBP20.7■□□□□ 0.9
CDK5RAP3-230ENST00000584042 PDZRN3Q9UPQ7 1066 aa20.7■□□□□ 0.9
CDK5RAP3-230ENST00000584042 EYA2O00167 538 aa20.69■□□□□ 0.9
CDK5RAP3-230ENST00000584042 G3BP1Q13283 466 aaKnown RBP eCLIP20.69■□□□□ 0.9
CDK5RAP3-230ENST00000584042 OS9Q13438 667 aaPredicted RBP20.69■□□□□ 0.9
CDK5RAP3-230ENST00000584042 LRRCC1Q9C099 1032 aa20.69■□□□□ 0.9
CDK5RAP3-230ENST00000584042 LRRC37AA6NMS7 1700 aa20.69■□□□□ 0.9
CDK5RAP3-230ENST00000584042 CHD1LQ86WJ1 897 aa20.68■□□□□ 0.9
CDK5RAP3-230ENST00000584042 SIL1Q9H173 461 aa20.68■□□□□ 0.9
CDK5RAP3-230ENST00000584042 TAF1P21675 1872 aa20.67■□□□□ 0.9
CDK5RAP3-230ENST00000584042 PSDA5PKW4 1024 aaPredicted RBP20.67■□□□□ 0.9
CDK5RAP3-230ENST00000584042 SOCS7O14512 581 aa20.67■□□□□ 0.9
CDK5RAP3-230ENST00000584042 ZBTB7AO95365 584 aa20.67■□□□□ 0.9
CDK5RAP3-230ENST00000584042 IL15P40933 162 aaPredicted RBP20.67■□□□□ 0.9
CDK5RAP3-230ENST00000584042 ANKRD45Q5TZF3 282 aa20.67■□□□□ 0.9
CDK5RAP3-230ENST00000584042 ZNF594Q96JF6 807 aaPredicted RBP20.67■□□□□ 0.9
CDK5RAP3-230ENST00000584042 SEC31BQ9NQW1 1179 aa20.67■□□□□ 0.9
CDK5RAP3-230ENST00000584042 ZBTB47Q9UFB7 747 aaPredicted RBP20.67■□□□□ 0.9
CDK5RAP3-230ENST00000584042 ARAP2Q8WZ64 1704 aa20.67■□□□□ 0.9
CDK5RAP3-230ENST00000584042 POLD1P28340 1107 aa20.66■□□□□ 0.9
CDK5RAP3-230ENST00000584042 PDE6BP35913 854 aa20.66■□□□□ 0.9
CDK5RAP3-230ENST00000584042 IGHMBP2P38935 993 aaKnown RBP20.66■□□□□ 0.9
CDK5RAP3-230ENST00000584042 DDX46Q7L014 1031 aaKnown RBP20.66■□□□□ 0.9
CDK5RAP3-230ENST00000584042 RHPN1Q8TCX5 695 aa20.66■□□□□ 0.9
CDK5RAP3-230ENST00000584042 RPGRQ92834 1020 aaKnown RBP20.66■□□□□ 0.9
CDK5RAP3-230ENST00000584042 KIAA1551Q9HCM1 1747 aa20.66■□□□□ 0.9
CDK5RAP3-230ENST00000584042 ZNF609O15014 1411 aa20.65■□□□□ 0.9
CDK5RAP3-230ENST00000584042 HOXA10P31260 410 aaPredicted RBP20.65■□□□□ 0.9
CDK5RAP3-230ENST00000584042 ATG9AQ7Z3C6 839 aa20.65■□□□□ 0.9
CDK5RAP3-230ENST00000584042 ANKRD18AQ8IVF6 992 aa20.65■□□□□ 0.9
CDK5RAP3-230ENST00000584042 LNPKQ9C0E8 428 aa20.65■□□□□ 0.9
CDK5RAP3-230ENST00000584042 APBB1O00213 710 aa20.64■□□□□ 0.89
CDK5RAP3-230ENST00000584042 SASH1O94885 1247 aa20.64■□□□□ 0.89
CDK5RAP3-230ENST00000584042 GRAPQ13588 217 aa20.64■□□□□ 0.89
CDK5RAP3-230ENST00000584042 GRAPLQ8TC17 118 aaPredicted RBP20.64■□□□□ 0.89
CDK5RAP3-230ENST00000584042 LRRC24Q50LG9 513 aa20.63■□□□□ 0.89
CDK5RAP3-230ENST00000584042 LDHAL6AQ6ZMR3 332 aa20.63■□□□□ 0.89
CDK5RAP3-230ENST00000584042 MPHOSPH8Q99549 860 aa20.63■□□□□ 0.89
CDK5RAP3-230ENST00000584042 SGIP1Q9BQI5 828 aa20.63■□□□□ 0.89
CDK5RAP3-230ENST00000584042 CNNM1Q9NRU3 951 aa20.63■□□□□ 0.89
CDK5RAP3-230ENST00000584042 RIPOR2Q9Y4F9 1068 aa20.63■□□□□ 0.89
CDK5RAP3-230ENST00000584042 MROH5Q6ZUA9 1318 aa20.62■□□□□ 0.89
CDK5RAP3-230ENST00000584042 CELF1Q92879 486 aaKnown RBP20.62■□□□□ 0.89
CDK5RAP3-230ENST00000584042 RBM17Q96I25 401 aaKnown RBP20.62■□□□□ 0.89
CDK5RAP3-230ENST00000584042 CRAMP1Q96RY5 1269 aa20.62■□□□□ 0.89
CDK5RAP3-230ENST00000584042 PUS3Q9BZE2 481 aaKnown RBP20.62■□□□□ 0.89
CDK5RAP3-230ENST00000584042 CACNA1SQ13698 1873 aa20.62■□□□□ 0.89
CDK5RAP3-230ENST00000584042 SMARCA5O60264 1052 aaPredicted RBP20.61■□□□□ 0.89
CDK5RAP3-230ENST00000584042 SRGNP10124 158 aa20.61■□□□□ 0.89
CDK5RAP3-230ENST00000584042 NPR1P16066 1061 aa20.61■□□□□ 0.89
CDK5RAP3-230ENST00000584042 IL1RAPL2Q9NP60 686 aa20.61■□□□□ 0.89
CDK5RAP3-230ENST00000584042 GPR108Q9NPR9 543 aa20.61■□□□□ 0.89
CDK5RAP3-230ENST00000584042 BSDC1Q9NW68 430 aaPredicted RBP20.61■□□□□ 0.89
CDK5RAP3-230ENST00000584042 PDE4AP27815 886 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms