RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	CDC5L	Q99459	802 aa	Known RBP	12.51	□□□□□ -0.41
NARF-222	ENST00000583908	RNF181	Q9P0P0	153 aa		12.51	□□□□□ -0.41
NARF-222	ENST00000583908	CACNA1S	Q13698	1873 aa		12.51	□□□□□ -0.41
NARF-222	ENST00000583908	GRM8	O00222	908 aa		12.5	□□□□□ -0.41
NARF-222	ENST00000583908	RARS	P54136	660 aa	Known RBP	12.5	□□□□□ -0.41
NARF-222	ENST00000583908	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
NARF-222	ENST00000583908	BEND3	Q5T5X7	828 aa		12.5	□□□□□ -0.41
NARF-222	ENST00000583908	SUPT20H	Q8NEM7	779 aa		12.5	□□□□□ -0.41
NARF-222	ENST00000583908	DDX60	Q8IY21	1712 aa	Known RBP	12.5	□□□□□ -0.41
NARF-222	ENST00000583908		H7C1W4	665 aa		12.49	□□□□□ -0.41
NARF-222	ENST00000583908	C9orf131	Q5VYM1	1079 aa		12.49	□□□□□ -0.41
NARF-222	ENST00000583908	PPP4R3CP	Q6ZMV5	832 aa		12.49	□□□□□ -0.41
NARF-222	ENST00000583908	ARHGAP45	Q92619	1136 aa		12.49	□□□□□ -0.41
NARF-222	ENST00000583908	ATP6V0A2	Q9Y487	856 aa		12.49	□□□□□ -0.41
NARF-222	ENST00000583908	RTL9	Q8NET4	1388 aa		12.48	□□□□□ -0.41
NARF-222	ENST00000583908	KDM2B	Q8NHM5	1336 aa		12.48	□□□□□ -0.41
NARF-222	ENST00000583908	RASSF7	Q02833	373 aa		12.48	□□□□□ -0.41
NARF-222	ENST00000583908	C3orf67	Q6ZVT6	689 aa		12.48	□□□□□ -0.41
NARF-222	ENST00000583908	ANKRD18A	Q8IVF6	992 aa		12.48	□□□□□ -0.41
NARF-222	ENST00000583908	SYNE4	Q8N205	404 aa		12.48	□□□□□ -0.41
NARF-222	ENST00000583908	PSMD1	Q99460	953 aa		12.48	□□□□□ -0.41
NARF-222	ENST00000583908	PLA2G12B	Q9BX93	195 aa		12.48	□□□□□ -0.41
NARF-222	ENST00000583908	NOB1	Q9ULX3	412 aa	Known RBP	12.48	□□□□□ -0.41
NARF-222	ENST00000583908	SLX4	Q8IY92	1834 aa		12.48	□□□□□ -0.41
NARF-222	ENST00000583908	NFKBIE	O00221	500 aa		12.47	□□□□□ -0.41
NARF-222	ENST00000583908	IGHMBP2	P38935	993 aa	Known RBP	12.47	□□□□□ -0.41
NARF-222	ENST00000583908	DPP8	Q6V1X1	898 aa	Predicted RBP	12.47	□□□□□ -0.41
NARF-222	ENST00000583908	SP8	Q8IXZ3	490 aa		12.47	□□□□□ -0.41
NARF-222	ENST00000583908	FTSJ3	Q8IY81	847 aa	Known RBP	12.47	□□□□□ -0.41
NARF-222	ENST00000583908	C7orf43	Q8WVR3	580 aa		12.47	□□□□□ -0.41
NARF-222	ENST00000583908	VPS33B	Q9H267	617 aa		12.47	□□□□□ -0.41
NARF-222	ENST00000583908	CHMP3	Q9Y3E7	222 aa		12.47	□□□□□ -0.41
NARF-222	ENST00000583908	RPS8	P62241	208 aa	Known RBP	12.46	□□□□□ -0.41
NARF-222	ENST00000583908	TAF7L	Q5H9L4	462 aa		12.46	□□□□□ -0.41
NARF-222	ENST00000583908	ZKSCAN2	Q63HK3	967 aa		12.46	□□□□□ -0.41
NARF-222	ENST00000583908	MPND	Q8N594	471 aa		12.46	□□□□□ -0.41
NARF-222	ENST00000583908	JDP2	Q8WYK2	163 aa		12.46	□□□□□ -0.41
NARF-222	ENST00000583908	FRAT1	Q92837	279 aa	Predicted RBP	12.46	□□□□□ -0.41
NARF-222	ENST00000583908	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.46	□□□□□ -0.41
NARF-222	ENST00000583908	FER1L6	Q2WGJ9	1857 aa		12.46	□□□□□ -0.42
NARF-222	ENST00000583908	MYH3	P11055	1940 aa		12.45	□□□□□ -0.42
NARF-222	ENST00000583908	ANKRD18B	A2A2Z9	1011 aa		12.45	□□□□□ -0.42
NARF-222	ENST00000583908	MS4A1	P11836	297 aa		12.45	□□□□□ -0.42
NARF-222	ENST00000583908	IARS	P41252	1262 aa	Known RBP	12.45	□□□□□ -0.42
NARF-222	ENST00000583908	IFIT5	Q13325	482 aa	Known RBP	12.45	□□□□□ -0.42
NARF-222	ENST00000583908	CCDC57	Q2TAC2	916 aa		12.45	□□□□□ -0.42
NARF-222	ENST00000583908	DPY19L2	Q6NUT2	758 aa		12.45	□□□□□ -0.42
NARF-222	ENST00000583908	ATF7IP	Q6VMQ6	1270 aa		12.45	□□□□□ -0.42
NARF-222	ENST00000583908	JARID2	Q92833	1246 aa	Predicted RBP	12.45	□□□□□ -0.42
NARF-222	ENST00000583908	EYA3	Q99504	573 aa		12.45	□□□□□ -0.42
NARF-222	ENST00000583908	MPHOSPH8	Q99549	860 aa		12.45	□□□□□ -0.42
NARF-222	ENST00000583908	UBTFL1	P0CB47	393 aa	Predicted RBP	12.44	□□□□□ -0.42
NARF-222	ENST00000583908	LARGE2	Q8N3Y3	721 aa		12.44	□□□□□ -0.42
NARF-222	ENST00000583908	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.44	□□□□□ -0.42
NARF-222	ENST00000583908	TTLL11	Q8NHH1	800 aa		12.44	□□□□□ -0.42
NARF-222	ENST00000583908	CELF1	Q92879	486 aa	Known RBP	12.44	□□□□□ -0.42
NARF-222	ENST00000583908	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.44	□□□□□ -0.42
NARF-222	ENST00000583908	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.44	□□□□□ -0.42
NARF-222	ENST00000583908	TIAM2	Q8IVF5	1701 aa		12.44	□□□□□ -0.42
NARF-222	ENST00000583908	UTY	O14607	1347 aa		12.43	□□□□□ -0.42
NARF-222	ENST00000583908	LRRC37A	A6NMS7	1700 aa		12.43	□□□□□ -0.42
NARF-222	ENST00000583908	PPIP5K2	O43314	1243 aa		12.43	□□□□□ -0.42
NARF-222	ENST00000583908	ITGA6	P23229	1130 aa		12.43	□□□□□ -0.42
NARF-222	ENST00000583908	CASP7	P55210	303 aa		12.43	□□□□□ -0.42
NARF-222	ENST00000583908	FAM161A	Q3B820	660 aa		12.43	□□□□□ -0.42
NARF-222	ENST00000583908	NIM1K	Q8IY84	436 aa		12.43	□□□□□ -0.42
NARF-222	ENST00000583908	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.43	□□□□□ -0.42
NARF-222	ENST00000583908	GREM2	Q9H772	168 aa		12.43	□□□□□ -0.42
NARF-222	ENST00000583908	ANKIB1	Q9P2G1	1089 aa		12.43	□□□□□ -0.42
NARF-222	ENST00000583908	XDH	P47989	1333 aa		12.42	□□□□□ -0.42
NARF-222	ENST00000583908		G3V3G9	751 aa		12.42	□□□□□ -0.42
NARF-222	ENST00000583908	CSF1R	P07333	972 aa		12.42	□□□□□ -0.42
NARF-222	ENST00000583908	GNAI3	P08754	354 aa		12.42	□□□□□ -0.42
NARF-222	ENST00000583908	EIF6	P56537	245 aa	Known RBP	12.42	□□□□□ -0.42
NARF-222	ENST00000583908	DCAF8	Q5TAQ9	597 aa		12.42	□□□□□ -0.42
NARF-222	ENST00000583908	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.42	□□□□□ -0.42
NARF-222	ENST00000583908	ZNF526	Q8TF50	670 aa	Predicted RBP	12.42	□□□□□ -0.42
NARF-222	ENST00000583908	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.42	□□□□□ -0.42
NARF-222	ENST00000583908	ANKRD2	Q9GZV1	360 aa		12.42	□□□□□ -0.42
NARF-222	ENST00000583908	SEC31B	Q9NQW1	1179 aa		12.42	□□□□□ -0.42
NARF-222	ENST00000583908	BSDC1	Q9NW68	430 aa	Predicted RBP	12.42	□□□□□ -0.42
NARF-222	ENST00000583908	GGA1	Q9UJY5	639 aa		12.42	□□□□□ -0.42
NARF-222	ENST00000583908	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.42	□□□□□ -0.42
NARF-222	ENST00000583908	C6orf229	H3BNL8	230 aa		12.41	□□□□□ -0.42
NARF-222	ENST00000583908	BCAR3	O75815	825 aa		12.41	□□□□□ -0.42
NARF-222	ENST00000583908	TRIM27	P14373	513 aa		12.41	□□□□□ -0.42
NARF-222	ENST00000583908	LMBR1L	Q6UX01	489 aa		12.41	□□□□□ -0.42
NARF-222	ENST00000583908	SNED1	Q8TER0	1413 aa		12.41	□□□□□ -0.42
NARF-222	ENST00000583908	RCAN3	Q9UKA8	241 aa		12.41	□□□□□ -0.42
NARF-222	ENST00000583908	GLTPD2	A6NH11	291 aa		12.4	□□□□□ -0.42
NARF-222	ENST00000583908	UFL1	O94874	794 aa		12.4	□□□□□ -0.42
NARF-222	ENST00000583908	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.4	□□□□□ -0.42
NARF-222	ENST00000583908	ATP2B4	P23634	1241 aa		12.4	□□□□□ -0.42
NARF-222	ENST00000583908	KCNJ4	P48050	445 aa		12.4	□□□□□ -0.42
NARF-222	ENST00000583908	WASHC4	Q2M389	1173 aa		12.4	□□□□□ -0.42
NARF-222	ENST00000583908	INTS3	Q68E01	1043 aa	Known RBP	12.4	□□□□□ -0.42
NARF-222	ENST00000583908	OLFM4	Q6UX06	510 aa		12.4	□□□□□ -0.42
NARF-222	ENST00000583908	SUCLG2	Q96I99	432 aa		12.4	□□□□□ -0.42
NARF-222	ENST00000583908	YTHDC1	Q96MU7	727 aa	Known RBP	12.4	□□□□□ -0.42
NARF-222	ENST00000583908	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.4	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms