RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 GPTP24298 496 aa11.42□□□□□ -0.58
CASC3-209ENST00000583902 GTF2E1P29083 439 aaPredicted RBP11.42□□□□□ -0.58
CASC3-209ENST00000583902 TM4SF1P30408 202 aa11.42□□□□□ -0.58
CASC3-209ENST00000583902 ZNF827Q17R98 1081 aa11.42□□□□□ -0.58
CASC3-209ENST00000583902 SUSD4Q5VX71 490 aa11.42□□□□□ -0.58
CASC3-209ENST00000583902 NBPF5PQ86XG9 351 aaPredicted RBP11.42□□□□□ -0.58
CASC3-209ENST00000583902 SIRT2Q8IXJ6 389 aa11.42□□□□□ -0.58
CASC3-209ENST00000583902 BICC1Q9H694 974 aaKnown RBP11.42□□□□□ -0.58
CASC3-209ENST00000583902 COPRSQ9NQ92 184 aa11.42□□□□□ -0.58
CASC3-209ENST00000583902 ST5P78524 1137 aa11.41□□□□□ -0.58
CASC3-209ENST00000583902 FOXO4P98177 505 aa11.41□□□□□ -0.58
CASC3-209ENST00000583902 SF3B3Q15393 1217 aaKnown RBP11.41□□□□□ -0.58
CASC3-209ENST00000583902 CCDC57Q2TAC2 916 aa11.41□□□□□ -0.58
CASC3-209ENST00000583902 CCDC152Q4G0S7 254 aa11.41□□□□□ -0.58
CASC3-209ENST00000583902 TBC1D9BQ66K14 1250 aa11.41□□□□□ -0.58
CASC3-209ENST00000583902 COL23A1Q86Y22 540 aaPredicted RBP11.41□□□□□ -0.58
CASC3-209ENST00000583902 UPF1Q92900 1129 aaKnown RBP eCLIP11.41□□□□□ -0.58
CASC3-209ENST00000583902 KAZALD1Q96I82 304 aa11.41□□□□□ -0.58
CASC3-209ENST00000583902 C1orf115Q9H7X2 142 aa11.41□□□□□ -0.58
CASC3-209ENST00000583902 PNPLA7Q6ZV29 1317 aa11.4□□□□□ -0.58
CASC3-209ENST00000583902 CIAO1O76071 339 aa11.4□□□□□ -0.58
CASC3-209ENST00000583902 IGHDP01880 384 aa11.4□□□□□ -0.58
CASC3-209ENST00000583902 CTSWP56202 376 aa11.4□□□□□ -0.58
CASC3-209ENST00000583902 NUCB1Q02818 461 aa11.4□□□□□ -0.58
CASC3-209ENST00000583902 G3BP1Q13283 466 aaKnown RBP eCLIP11.4□□□□□ -0.58
CASC3-209ENST00000583902 IFIT5Q13325 482 aaKnown RBP11.4□□□□□ -0.58
CASC3-209ENST00000583902 NFIXQ14938 502 aa11.4□□□□□ -0.58
CASC3-209ENST00000583902 CNBD1Q8NA66 436 aa11.4□□□□□ -0.58
CASC3-209ENST00000583902 KIF1BPQ96EK5 621 aa11.4□□□□□ -0.58
CASC3-209ENST00000583902 FAM89AQ96GI7 184 aa11.4□□□□□ -0.58
CASC3-209ENST00000583902 NLRP3Q96P20 1036 aa11.4□□□□□ -0.58
CASC3-209ENST00000583902 SRP68Q9UHB9 627 aaKnown RBP11.4□□□□□ -0.58
CASC3-209ENST00000583902 NRXN2Q9P2S2 1712 aa11.4□□□□□ -0.58
CASC3-209ENST00000583902 EP400Q96L91 3159 aa11.4□□□□□ -0.59
CASC3-209ENST00000583902 PNMA6EA0A0J9YXQ4 647 aa11.39□□□□□ -0.59
CASC3-209ENST00000583902 ANKRD18BA2A2Z9 1011 aa11.39□□□□□ -0.59
CASC3-209ENST00000583902 HAX1O00165 279 aa11.39□□□□□ -0.59
CASC3-209ENST00000583902 NPHP1O15259 732 aa11.39□□□□□ -0.59
CASC3-209ENST00000583902 LMBR1LQ6UX01 489 aa11.39□□□□□ -0.59
CASC3-209ENST00000583902 DDX60Q8IY21 1712 aaKnown RBP11.39□□□□□ -0.59
CASC3-209ENST00000583902 TTLL11Q8NHH1 800 aa11.39□□□□□ -0.59
CASC3-209ENST00000583902 CDC5LQ99459 802 aaKnown RBP11.39□□□□□ -0.59
CASC3-209ENST00000583902 LRRCC1Q9C099 1032 aa11.39□□□□□ -0.59
CASC3-209ENST00000583902 SURF6O75683 361 aaKnown RBP11.38□□□□□ -0.59
CASC3-209ENST00000583902 IL15P40933 162 aaPredicted RBP11.38□□□□□ -0.59
CASC3-209ENST00000583902 TMC4Q7Z404 712 aa11.38□□□□□ -0.59
CASC3-209ENST00000583902 DEFB132Q7Z7B7 95 aa11.38□□□□□ -0.59
CASC3-209ENST00000583902 CHD1LQ86WJ1 897 aa11.38□□□□□ -0.59
CASC3-209ENST00000583902 PARP3Q9Y6F1 533 aa11.38□□□□□ -0.59
CASC3-209ENST00000583902 KLRG2A4D1S0 409 aaPredicted RBP11.37□□□□□ -0.59
CASC3-209ENST00000583902 EIF5BO60841 1220 aaKnown RBP11.37□□□□□ -0.59
CASC3-209ENST00000583902 SERPINB2P05120 415 aa11.37□□□□□ -0.59
CASC3-209ENST00000583902 RFX5P48382 616 aaPredicted RBP11.37□□□□□ -0.59
CASC3-209ENST00000583902 AMIGO3Q86WK7 504 aa11.37□□□□□ -0.59
CASC3-209ENST00000583902 GPR108Q9NPR9 543 aa11.37□□□□□ -0.59
CASC3-209ENST00000583902 POLRMTO00411 1230 aaKnown RBP11.36□□□□□ -0.59
CASC3-209ENST00000583902 PDE6BP35913 854 aa11.36□□□□□ -0.59
CASC3-209ENST00000583902 PTPN12Q05209 780 aaKnown RBP11.36□□□□□ -0.59
CASC3-209ENST00000583902 OS9Q13438 667 aaPredicted RBP11.36□□□□□ -0.59
CASC3-209ENST00000583902 TAF7LQ5H9L4 462 aa11.36□□□□□ -0.59
CASC3-209ENST00000583902 EPHA10Q5JZY3 1008 aa11.36□□□□□ -0.59
CASC3-209ENST00000583902 ANKRD45Q5TZF3 282 aa11.36□□□□□ -0.59
CASC3-209ENST00000583902 CLASRPQ8N2M8 674 aaKnown RBP11.36□□□□□ -0.59
CASC3-209ENST00000583902 BRIP1Q9BX63 1249 aa11.36□□□□□ -0.59
CASC3-209ENST00000583902 ANO8Q9HCE9 1232 aaPredicted RBP11.36□□□□□ -0.59
CASC3-209ENST00000583902 AKAP2Q9Y2D5 859 aa11.36□□□□□ -0.59
CASC3-209ENST00000583902 CHMP3Q9Y3E7 222 aa11.36□□□□□ -0.59
CASC3-209ENST00000583902 AOX1Q06278 1338 aa11.35□□□□□ -0.59
CASC3-209ENST00000583902 MROH5Q6ZUA9 1318 aa11.35□□□□□ -0.59
CASC3-209ENST00000583902 EYA2O00167 538 aa11.35□□□□□ -0.59
CASC3-209ENST00000583902 ITGA6P23229 1130 aa11.35□□□□□ -0.59
CASC3-209ENST00000583902 IGHMBP2P38935 993 aaKnown RBP11.35□□□□□ -0.59
CASC3-209ENST00000583902 ERFEQ4G0M1 354 aa11.35□□□□□ -0.59
CASC3-209ENST00000583902 PRR5LQ6MZQ0 368 aa11.35□□□□□ -0.59
CASC3-209ENST00000583902 BICDL1Q6ZP65 573 aa11.35□□□□□ -0.59
CASC3-209ENST00000583902 TICAM2Q86XR7 235 aa11.35□□□□□ -0.59
CASC3-209ENST00000583902 RHPN1Q8TCX5 695 aa11.35□□□□□ -0.59
CASC3-209ENST00000583902 HOXA10P31260 410 aaPredicted RBP11.34□□□□□ -0.59
CASC3-209ENST00000583902 CRY2Q49AN0 593 aa11.34□□□□□ -0.59
CASC3-209ENST00000583902 DDX46Q7L014 1031 aaKnown RBP11.34□□□□□ -0.59
CASC3-209ENST00000583902 RBM17Q96I25 401 aaKnown RBP11.34□□□□□ -0.59
CASC3-209ENST00000583902 GPATCH3Q96I76 525 aa11.34□□□□□ -0.59
CASC3-209ENST00000583902 MPHOSPH8Q99549 860 aa11.34□□□□□ -0.59
CASC3-209ENST00000583902 MTFR1LQ9H019 292 aa11.34□□□□□ -0.59
CASC3-209ENST00000583902 OSBPL3Q9H4L5 887 aa11.34□□□□□ -0.59
CASC3-209ENST00000583902 BBOX1O75936 387 aa11.33□□□□□ -0.6
CASC3-209ENST00000583902 MMP10P09238 476 aa11.33□□□□□ -0.6
CASC3-209ENST00000583902 HCLS1P14317 486 aaPredicted RBP11.33□□□□□ -0.6
CASC3-209ENST00000583902 POLD1P28340 1107 aa11.33□□□□□ -0.6
CASC3-209ENST00000583902 ALDH1B1P30837 517 aa11.33□□□□□ -0.6
CASC3-209ENST00000583902 FAM161AQ3B820 660 aa11.33□□□□□ -0.6
CASC3-209ENST00000583902 GRIPAP1Q4V328 841 aa11.33□□□□□ -0.6
CASC3-209ENST00000583902 LDHAL6AQ6ZMR3 332 aa11.33□□□□□ -0.6
CASC3-209ENST00000583902 NUTM1Q86Y26 1132 aa11.33□□□□□ -0.6
CASC3-209ENST00000583902 ANKRD18AQ8IVF6 992 aa11.33□□□□□ -0.6
CASC3-209ENST00000583902 CRAMP1Q96RY5 1269 aa11.33□□□□□ -0.6
CASC3-209ENST00000583902 GREM2Q9H772 168 aa11.33□□□□□ -0.6
CASC3-209ENST00000583902 BSDC1Q9NW68 430 aaPredicted RBP11.33□□□□□ -0.6
CASC3-209ENST00000583902 CEP126Q9P2H0 1117 aa11.33□□□□□ -0.6
CASC3-209ENST00000583902 EXOC6BQ9Y2D4 811 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms