RNA–Protein interactions for RNA: ENST00000583805.1

CRLF3-205, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-205ENST00000583805 JMYQ8N9B5 988 aa11.36□□□□□ -0.59
CRLF3-205ENST00000583805 L3MBTL3Q96JM7 780 aaPredicted RBP11.36□□□□□ -0.59
CRLF3-205ENST00000583805 THUMPD2Q9BTF0 503 aaKnown RBP11.36□□□□□ -0.59
CRLF3-205ENST00000583805 CRISPLD2Q9H0B8 497 aa11.36□□□□□ -0.59
CRLF3-205ENST00000583805 RRP7AQ9Y3A4 280 aaKnown RBP11.36□□□□□ -0.59
CRLF3-205ENST00000583805 POTECB2RU33 542 aa11.35□□□□□ -0.59
CRLF3-205ENST00000583805 MYL6BP14649 208 aa11.35□□□□□ -0.59
CRLF3-205ENST00000583805 TMPOP42166 694 aaKnown RBP11.35□□□□□ -0.59
CRLF3-205ENST00000583805 HSP90AB3PQ58FF7 597 aa11.35□□□□□ -0.59
CRLF3-205ENST00000583805 RPGRQ92834 1020 aaKnown RBP11.35□□□□□ -0.59
CRLF3-205ENST00000583805 PSMD1Q99460 953 aa11.35□□□□□ -0.59
CRLF3-205ENST00000583805 PSME4Q14997 1843 aa11.35□□□□□ -0.59
CRLF3-205ENST00000583805 UBN2Q6ZU65 1347 aa11.35□□□□□ -0.59
CRLF3-205ENST00000583805 FAM177BA6PVY3 158 aa11.34□□□□□ -0.59
CRLF3-205ENST00000583805 HOXA10P31260 410 aaPredicted RBP11.34□□□□□ -0.59
CRLF3-205ENST00000583805 CAMK2BQ13554 666 aa11.34□□□□□ -0.59
CRLF3-205ENST00000583805 WDR43Q15061 677 aaKnown RBP eCLIP11.34□□□□□ -0.59
CRLF3-205ENST00000583805 TTLL7Q6ZT98 887 aa11.34□□□□□ -0.59
CRLF3-205ENST00000583805 ZNF34Q8IZ26 560 aa11.34□□□□□ -0.59
CRLF3-205ENST00000583805 NGEFQ8N5V2 710 aa11.34□□□□□ -0.59
CRLF3-205ENST00000583805 ZBTB3Q9H5J0 574 aa11.34□□□□□ -0.59
CRLF3-205ENST00000583805 DDNO94850 711 aaPredicted RBP11.33□□□□□ -0.6
CRLF3-205ENST00000583805 NTSR2O95665 410 aa11.33□□□□□ -0.6
CRLF3-205ENST00000583805 IARSP41252 1262 aaKnown RBP11.33□□□□□ -0.6
CRLF3-205ENST00000583805 LDHDQ86WU2 507 aa11.33□□□□□ -0.6
CRLF3-205ENST00000583805 NUTM1Q86Y26 1132 aa11.33□□□□□ -0.6
CRLF3-205ENST00000583805 GPIHBP1Q8IV16 184 aa11.33□□□□□ -0.6
CRLF3-205ENST00000583805 RUNDC1Q96C34 613 aa11.33□□□□□ -0.6
CRLF3-205ENST00000583805 RBM17Q96I25 401 aaKnown RBP11.33□□□□□ -0.6
CRLF3-205ENST00000583805 CRAMP1Q96RY5 1269 aa11.33□□□□□ -0.6
CRLF3-205ENST00000583805 HOXB7P09629 217 aa11.32□□□□□ -0.6
CRLF3-205ENST00000583805 GPTP24298 496 aa11.32□□□□□ -0.6
CRLF3-205ENST00000583805 LRP10Q7Z4F1 713 aa11.32□□□□□ -0.6
CRLF3-205ENST00000583805 JDP2Q8WYK2 163 aa11.32□□□□□ -0.6
CRLF3-205ENST00000583805 NLRP3Q96P20 1036 aa11.32□□□□□ -0.6
CRLF3-205ENST00000583805 TMX4Q9H1E5 349 aaPredicted RBP11.32□□□□□ -0.6
CRLF3-205ENST00000583805 ZNF277Q9NRM2 450 aaPredicted RBP11.32□□□□□ -0.6
CRLF3-205ENST00000583805 LTBP1Q14766 1721 aa11.32□□□□□ -0.6
CRLF3-205ENST00000583805 SPEF2Q9C093 1822 aa11.31□□□□□ -0.6
CRLF3-205ENST00000583805 FZD9O00144 591 aa11.31□□□□□ -0.6
CRLF3-205ENST00000583805 EIF2S2P20042 333 aaKnown RBP11.31□□□□□ -0.6
CRLF3-205ENST00000583805 FXR2P51116 673 aaKnown RBP eCLIP11.31□□□□□ -0.6
CRLF3-205ENST00000583805 HTRA3P83110 453 aa11.31□□□□□ -0.6
CRLF3-205ENST00000583805 MKRN3Q13064 507 aaKnown RBP11.31□□□□□ -0.6
CRLF3-205ENST00000583805 DDX10Q13206 875 aaKnown RBP11.31□□□□□ -0.6
CRLF3-205ENST00000583805 SUSD4Q5VX71 490 aa11.31□□□□□ -0.6
CRLF3-205ENST00000583805 GPC2Q8N158 579 aa11.31□□□□□ -0.6
CRLF3-205ENST00000583805 SYNE4Q8N205 404 aa11.31□□□□□ -0.6
CRLF3-205ENST00000583805 UTP14AQ9BVJ6 771 aaKnown RBP11.31□□□□□ -0.6
CRLF3-205ENST00000583805 VPS33BQ9H267 617 aa11.31□□□□□ -0.6
CRLF3-205ENST00000583805 HACL1Q9UJ83 578 aa11.31□□□□□ -0.6
CRLF3-205ENST00000583805 POLR2AP24928 1970 aaKnown RBP11.3□□□□□ -0.6
CRLF3-205ENST00000583805 PPEF1O14829 653 aaPredicted RBP11.3□□□□□ -0.6
CRLF3-205ENST00000583805 PDIA6Q15084 440 aa11.3□□□□□ -0.6
CRLF3-205ENST00000583805 SLC10A5Q5PT55 438 aa11.3□□□□□ -0.6
CRLF3-205ENST00000583805 PNMA8AQ86V59 439 aaPredicted RBP11.3□□□□□ -0.6
CRLF3-205ENST00000583805 TAF1DQ9H5J8 278 aaPredicted RBP11.3□□□□□ -0.6
CRLF3-205ENST00000583805 DDX21Q9NR30 783 aaKnown RBP eCLIP11.3□□□□□ -0.6
CRLF3-205ENST00000583805 THSD7BQ9C0I4 1608 aa11.3□□□□□ -0.6
CRLF3-205ENST00000583805 ZNF541Q9H0D2 1346 aa11.3□□□□□ -0.6
CRLF3-205ENST00000583805 COL4A5P29400 1685 aa11.3□□□□□ -0.6
CRLF3-205ENST00000583805 CHL1O00533 1208 aa11.29□□□□□ -0.6
CRLF3-205ENST00000583805 EIF6P56537 245 aaKnown RBP11.29□□□□□ -0.6
CRLF3-205ENST00000583805 SUPT20HQ8NEM7 779 aa11.29□□□□□ -0.6
CRLF3-205ENST00000583805 PASKQ96RG2 1323 aa11.29□□□□□ -0.6
CRLF3-205ENST00000583805 EPHX2P34913 555 aa11.28□□□□□ -0.6
CRLF3-205ENST00000583805 CALD1Q05682 793 aaKnown RBP11.28□□□□□ -0.6
CRLF3-205ENST00000583805 OLFM4Q6UX06 510 aa11.28□□□□□ -0.6
CRLF3-205ENST00000583805 COPS6Q7L5N1 327 aa11.28□□□□□ -0.6
CRLF3-205ENST00000583805 TMC4Q7Z404 712 aa11.28□□□□□ -0.6
CRLF3-205ENST00000583805 CCDC146Q8IYE0 955 aa11.28□□□□□ -0.6
CRLF3-205ENST00000583805 MS4A4AQ96JQ5 239 aa11.28□□□□□ -0.6
CRLF3-205ENST00000583805 DBF4Q9UBU7 674 aaPredicted RBP11.28□□□□□ -0.6
CRLF3-205ENST00000583805 TRIM35Q9UPQ4 493 aa11.28□□□□□ -0.6
CRLF3-205ENST00000583805 ABCC4O15439 1325 aa11.28□□□□□ -0.6
CRLF3-205ENST00000583805 SH3TC1Q8TE82 1336 aa11.28□□□□□ -0.6
CRLF3-205ENST00000583805 LMOD1P29536 600 aaPredicted RBP11.27□□□□□ -0.61
CRLF3-205ENST00000583805 TCIRG1Q13488 830 aa11.27□□□□□ -0.61
CRLF3-205ENST00000583805 PROSER3Q2NL68 480 aa11.27□□□□□ -0.61
CRLF3-205ENST00000583805 HDGFL1Q5TGJ6 251 aa11.27□□□□□ -0.61
CRLF3-205ENST00000583805 NLRP10Q86W26 655 aa11.27□□□□□ -0.61
CRLF3-205ENST00000583805 NIM1KQ8IY84 436 aa11.27□□□□□ -0.61
CRLF3-205ENST00000583805 LARGE2Q8N3Y3 721 aa11.27□□□□□ -0.61
CRLF3-205ENST00000583805 XAGE3Q8WTP9 111 aa11.27□□□□□ -0.61
CRLF3-205ENST00000583805 CHMP4AQ9BY43 222 aa11.27□□□□□ -0.61
CRLF3-205ENST00000583805 PRKRIP1Q9H875 184 aaPredicted RBP11.27□□□□□ -0.61
CRLF3-205ENST00000583805 ATP6V0A2Q9Y487 856 aa11.27□□□□□ -0.61
CRLF3-205ENST00000583805 DUOX1Q9NRD9 1551 aa11.27□□□□□ -0.61
CRLF3-205ENST00000583805 BBOX1O75936 387 aa11.26□□□□□ -0.61
CRLF3-205ENST00000583805 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
CRLF3-205ENST00000583805 POTEJP0CG39 1038 aa11.26□□□□□ -0.61
CRLF3-205ENST00000583805 AIMP1Q12904 312 aaKnown RBP11.26□□□□□ -0.61
CRLF3-205ENST00000583805 EAPPQ56P03 285 aaPredicted RBP11.26□□□□□ -0.61
CRLF3-205ENST00000583805 PLBD2Q8NHP8 589 aa11.26□□□□□ -0.61
CRLF3-205ENST00000583805 RTFDC1Q9BY42 306 aaPredicted RBP11.26□□□□□ -0.61
CRLF3-205ENST00000583805 HYPKQ9NX55 129 aa11.26□□□□□ -0.61
CRLF3-205ENST00000583805 CHPF2Q9P2E5 772 aa11.26□□□□□ -0.61
CRLF3-205ENST00000583805 ADAMTS8Q9UP79 889 aa11.26□□□□□ -0.61
CRLF3-205ENST00000583805 CDHR2Q9BYE9 1310 aa11.26□□□□□ -0.61
CRLF3-205ENST00000583805 CNTNAP1P78357 1384 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms