RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	DUOX1	Q9NRD9	1551 aa		19.72	■□□□□ 0.75
SREBF1-222	ENST00000583732	ZNRF3	Q9ULT6	936 aa		19.72	■□□□□ 0.75
SREBF1-222	ENST00000583732	RASSF10	A6NK89	507 aa		19.71	■□□□□ 0.75
SREBF1-222	ENST00000583732	ATP5J2-PTCD1	G3V325	749 aa		19.71	■□□□□ 0.75
SREBF1-222	ENST00000583732	RTL5	Q5HYW3	569 aa	Predicted RBP	19.71	■□□□□ 0.75
SREBF1-222	ENST00000583732	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	19.71	■□□□□ 0.75
SREBF1-222	ENST00000583732	USP50	Q70EL3	339 aa	Predicted RBP	19.71	■□□□□ 0.75
SREBF1-222	ENST00000583732	RTFDC1	Q9BY42	306 aa	Predicted RBP	19.71	■□□□□ 0.75
SREBF1-222	ENST00000583732	COL4A1	P02462	1669 aa		19.71	■□□□□ 0.75
SREBF1-222	ENST00000583732	TRAF5	O00463	557 aa		19.7	■□□□□ 0.74
SREBF1-222	ENST00000583732	GMPS	P49915	693 aa	Predicted RBP	19.7	■□□□□ 0.74
SREBF1-222	ENST00000583732	DUSP27	Q5VZP5	1158 aa		19.7	■□□□□ 0.74
SREBF1-222	ENST00000583732	ANKRD13D	Q6ZTN6	518 aa		19.7	■□□□□ 0.74
SREBF1-222	ENST00000583732	PLBD2	Q8NHP8	589 aa		19.7	■□□□□ 0.74
SREBF1-222	ENST00000583732	FAM89A	Q96GI7	184 aa		19.7	■□□□□ 0.74
SREBF1-222	ENST00000583732	VPS33B	Q9H267	617 aa		19.7	■□□□□ 0.74
SREBF1-222	ENST00000583732	ADARB2	Q9NS39	739 aa	Known RBP	19.7	■□□□□ 0.74
SREBF1-222	ENST00000583732	GPRC5D	Q9NZD1	345 aa		19.7	■□□□□ 0.74
SREBF1-222	ENST00000583732	DBF4	Q9UBU7	674 aa	Predicted RBP	19.7	■□□□□ 0.74
SREBF1-222	ENST00000583732	RAD17	O75943	681 aa		19.69	■□□□□ 0.74
SREBF1-222	ENST00000583732	HOXB7	P09629	217 aa		19.69	■□□□□ 0.74
SREBF1-222	ENST00000583732	KIAA2012	Q0VF49	1180 aa		19.69	■□□□□ 0.74
SREBF1-222	ENST00000583732	GRM1	Q13255	1194 aa		19.69	■□□□□ 0.74
SREBF1-222	ENST00000583732	CIAPIN1	Q6FI81	312 aa		19.69	■□□□□ 0.74
SREBF1-222	ENST00000583732	ISCA1	Q9BUE6	129 aa		19.69	■□□□□ 0.74
SREBF1-222	ENST00000583732	MBIP	Q9NS73	344 aa		19.69	■□□□□ 0.74
SREBF1-222	ENST00000583732	WDR33	Q9C0J8	1336 aa	Known RBP	19.69	■□□□□ 0.74
SREBF1-222	ENST00000583732	CTCF	P49711	727 aa	Predicted RBP	19.68	■□□□□ 0.74
SREBF1-222	ENST00000583732	CFAP44	Q96MT7	982 aa		19.68	■□□□□ 0.74
SREBF1-222	ENST00000583732	BCL2L13	Q9BXK5	485 aa		19.68	■□□□□ 0.74
SREBF1-222	ENST00000583732	THSD7B	Q9C0I4	1608 aa		19.67	■□□□□ 0.74
SREBF1-222	ENST00000583732	CELF1	Q92879	486 aa	Known RBP	19.67	■□□□□ 0.74
SREBF1-222	ENST00000583732	PRKRIP1	Q9H875	184 aa	Predicted RBP	19.66	■□□□□ 0.74
SREBF1-222	ENST00000583732	HYPK	Q9NX55	129 aa		19.66	■□□□□ 0.74
SREBF1-222	ENST00000583732	WBP1L	Q9NX94	342 aa		19.66	■□□□□ 0.74
SREBF1-222	ENST00000583732	YDJC	A8MPS7	323 aa		19.65	■□□□□ 0.74
SREBF1-222	ENST00000583732	ELL2	O00472	640 aa	Predicted RBP	19.65	■□□□□ 0.74
SREBF1-222	ENST00000583732	LBX1	P52954	281 aa		19.65	■□□□□ 0.74
SREBF1-222	ENST00000583732	CYP4F22	Q6NT55	531 aa		19.65	■□□□□ 0.74
SREBF1-222	ENST00000583732	PRDM10	Q9NQV6	1147 aa		19.65	■□□□□ 0.74
SREBF1-222	ENST00000583732	SHTN1	A0MZ66	631 aa		19.64	■□□□□ 0.73
SREBF1-222	ENST00000583732	APAF1	O14727	1248 aa		19.64	■□□□□ 0.73
SREBF1-222	ENST00000583732	RIMBP2	O15034	1052 aa		19.64	■□□□□ 0.73
SREBF1-222	ENST00000583732	TNIP1	Q15025	636 aa		19.64	■□□□□ 0.73
SREBF1-222	ENST00000583732	CST9	Q5W186	159 aa		19.64	■□□□□ 0.73
SREBF1-222	ENST00000583732	TMC4	Q7Z404	712 aa		19.64	■□□□□ 0.73
SREBF1-222	ENST00000583732	RIC3	Q7Z5B4	369 aa		19.64	■□□□□ 0.73
SREBF1-222	ENST00000583732	TRPM4	Q8TD43	1214 aa		19.64	■□□□□ 0.73
SREBF1-222	ENST00000583732	CAPNS2	Q96L46	248 aa		19.64	■□□□□ 0.73
SREBF1-222	ENST00000583732	GLIS2	Q9BZE0	524 aa	Predicted RBP	19.64	■□□□□ 0.73
SREBF1-222	ENST00000583732	PHAX	Q9H814	394 aa	Known RBP	19.64	■□□□□ 0.73
SREBF1-222	ENST00000583732	NSFL1C	Q9UNZ2	370 aa	Known RBP	19.64	■□□□□ 0.73
SREBF1-222	ENST00000583732	IRS4	O14654	1257 aa	Predicted RBP	19.63	■□□□□ 0.73
SREBF1-222	ENST00000583732	GOLGA2	Q08379	1002 aa		19.63	■□□□□ 0.73
SREBF1-222	ENST00000583732	SF3B3	Q15393	1217 aa	Known RBP	19.63	■□□□□ 0.73
SREBF1-222	ENST00000583732	GPR101	Q96P66	508 aa	Predicted RBP	19.63	■□□□□ 0.73
SREBF1-222	ENST00000583732	ZNF408	Q9H9D4	720 aa		19.63	■□□□□ 0.73
SREBF1-222	ENST00000583732	DBNDD1	Q9H9R9	158 aa		19.63	■□□□□ 0.73
SREBF1-222	ENST00000583732	CDHR2	Q9BYE9	1310 aa		19.62	■□□□□ 0.73
SREBF1-222	ENST00000583732	C6orf229	H3BNL8	230 aa		19.62	■□□□□ 0.73
SREBF1-222	ENST00000583732	CELF2	O95319	508 aa	Known RBP	19.62	■□□□□ 0.73
SREBF1-222	ENST00000583732	ZNF853	P0CG23	659 aa		19.62	■□□□□ 0.73
SREBF1-222	ENST00000583732	HSPA8	P11142	646 aa	Known RBP	19.62	■□□□□ 0.73
SREBF1-222	ENST00000583732	GPSM2	P81274	684 aa		19.62	■□□□□ 0.73
SREBF1-222	ENST00000583732	WASHC4	Q2M389	1173 aa		19.62	■□□□□ 0.73
SREBF1-222	ENST00000583732	MYD88	Q99836	296 aa		19.62	■□□□□ 0.73
SREBF1-222	ENST00000583732	IFT57	Q9NWB7	429 aa		19.62	■□□□□ 0.73
SREBF1-222	ENST00000583732	ZBTB12	Q9Y330	459 aa	Predicted RBP	19.62	■□□□□ 0.73
SREBF1-222	ENST00000583732	ECE1	P42892	770 aa		19.61	■□□□□ 0.73
SREBF1-222	ENST00000583732	HIRA	P54198	1017 aa	Predicted RBP	19.61	■□□□□ 0.73
SREBF1-222	ENST00000583732	GNAI1	P63096	354 aa		19.61	■□□□□ 0.73
SREBF1-222	ENST00000583732	MAP2K1	Q02750	393 aa	Predicted RBP	19.61	■□□□□ 0.73
SREBF1-222	ENST00000583732	CNOT7	Q9UIV1	285 aa	Known RBP	19.61	■□□□□ 0.73
SREBF1-222	ENST00000583732	TLL2	Q9Y6L7	1015 aa		19.61	■□□□□ 0.73
SREBF1-222	ENST00000583732	DOK7	Q18PE1	504 aa		19.6	■□□□□ 0.73
SREBF1-222	ENST00000583732	MICALL2	Q8IY33	904 aa		19.6	■□□□□ 0.73
SREBF1-222	ENST00000583732	JARID2	Q92833	1246 aa	Predicted RBP	19.6	■□□□□ 0.73
SREBF1-222	ENST00000583732	POLL	Q9UGP5	575 aa		19.6	■□□□□ 0.73
SREBF1-222	ENST00000583732	PSMD14	O00487	310 aa		19.59	■□□□□ 0.73
SREBF1-222	ENST00000583732	AOC2	O75106	756 aa		19.59	■□□□□ 0.73
SREBF1-222	ENST00000583732	CCDC85A	Q96PX6	553 aa	Predicted RBP	19.59	■□□□□ 0.73
SREBF1-222	ENST00000583732	SEC31B	Q9NQW1	1179 aa		19.59	■□□□□ 0.73
SREBF1-222	ENST00000583732	SPEF2	Q9C093	1822 aa		19.58	■□□□□ 0.73
SREBF1-222	ENST00000583732		H7C1D1	291 aa		19.58	■□□□□ 0.72
SREBF1-222	ENST00000583732	ECE2	O60344	883 aa		19.58	■□□□□ 0.72
SREBF1-222	ENST00000583732	CALD1	Q05682	793 aa	Known RBP	19.58	■□□□□ 0.72
SREBF1-222	ENST00000583732	TRIM28	Q13263	835 aa	Known RBP	19.58	■□□□□ 0.72
SREBF1-222	ENST00000583732	C8orf58	Q8NAV2	365 aa		19.58	■□□□□ 0.72
SREBF1-222	ENST00000583732	RPS8	P62241	208 aa	Known RBP	19.57	■□□□□ 0.72
SREBF1-222	ENST00000583732	SAMD7	Q7Z3H4	446 aa		19.57	■□□□□ 0.72
SREBF1-222	ENST00000583732	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	19.57	■□□□□ 0.72
SREBF1-222	ENST00000583732	EYA3	Q99504	573 aa		19.57	■□□□□ 0.72
SREBF1-222	ENST00000583732	BEGAIN	Q9BUH8	593 aa		19.57	■□□□□ 0.72
SREBF1-222	ENST00000583732	KCNQ5	Q9NR82	932 aa		19.57	■□□□□ 0.72
SREBF1-222	ENST00000583732	SCN9A	Q15858	1988 aa		19.57	■□□□□ 0.72
SREBF1-222	ENST00000583732	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	19.56	■□□□□ 0.72
SREBF1-222	ENST00000583732	DLK2	Q6UY11	383 aa		19.56	■□□□□ 0.72
SREBF1-222	ENST00000583732	USP48	Q86UV5	1035 aa		19.56	■□□□□ 0.72
SREBF1-222	ENST00000583732	TBC1D16	Q8TBP0	767 aa		19.56	■□□□□ 0.72
SREBF1-222	ENST00000583732	PGAP2	Q9UHJ9	254 aa		19.56	■□□□□ 0.72

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