RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 CDCA5Q96FF9 252 aa8.62□□□□□ -1.03
NUP85-221ENST00000583548 PAPPA2Q9BXP8 1791 aa8.62□□□□□ -1.03
NUP85-221ENST00000583548 ABCC12Q96J65 1359 aa8.61□□□□□ -1.03
NUP85-221ENST00000583548 TCERG1O14776 1098 aaKnown RBP8.61□□□□□ -1.03
NUP85-221ENST00000583548 ANKRD13DQ6ZTN6 518 aa8.61□□□□□ -1.03
NUP85-221ENST00000583548 OTOP1Q7RTM1 612 aa8.61□□□□□ -1.03
NUP85-221ENST00000583548 ERO1AQ96HE7 468 aa8.61□□□□□ -1.03
NUP85-221ENST00000583548 GGA3Q9NZ52 723 aa8.61□□□□□ -1.03
NUP85-221ENST00000583548 A0A1W2PPC1 479 aa8.6□□□□□ -1.03
NUP85-221ENST00000583548 BBOX1O75936 387 aa8.6□□□□□ -1.03
NUP85-221ENST00000583548 SNRPA1P09661 255 aaKnown RBP8.6□□□□□ -1.03
NUP85-221ENST00000583548 INHBEP58166 350 aa8.6□□□□□ -1.03
NUP85-221ENST00000583548 TCIRG1Q13488 830 aa8.6□□□□□ -1.03
NUP85-221ENST00000583548 KIF4BQ2VIQ3 1234 aa8.6□□□□□ -1.03
NUP85-221ENST00000583548 NBPF11Q86T75 865 aa8.6□□□□□ -1.03
NUP85-221ENST00000583548 NUTM1Q86Y26 1132 aa8.6□□□□□ -1.03
NUP85-221ENST00000583548 SP8Q8IXZ3 490 aa8.6□□□□□ -1.03
NUP85-221ENST00000583548 NECTIN2Q92692 538 aa8.6□□□□□ -1.03
NUP85-221ENST00000583548 NLRP3Q96P20 1036 aa8.6□□□□□ -1.03
NUP85-221ENST00000583548 RBM27Q9P2N5 1060 aaKnown RBP8.6□□□□□ -1.03
NUP85-221ENST00000583548 PTPN22Q9Y2R2 807 aa8.6□□□□□ -1.03
NUP85-221ENST00000583548 USP16Q9Y5T5 823 aa8.6□□□□□ -1.03
NUP85-221ENST00000583548 SHTN1A0MZ66 631 aa8.59□□□□□ -1.03
NUP85-221ENST00000583548 GNAT3A8MTJ3 354 aa8.59□□□□□ -1.03
NUP85-221ENST00000583548 ERVV-1B6SEH8 477 aa8.59□□□□□ -1.03
NUP85-221ENST00000583548 ARHGEF6Q15052 776 aa8.59□□□□□ -1.03
NUP85-221ENST00000583548 RBM26Q5T8P6 1007 aaKnown RBP8.59□□□□□ -1.03
NUP85-221ENST00000583548 TMC4Q7Z404 712 aa8.59□□□□□ -1.03
NUP85-221ENST00000583548 MORC1Q86VD1 984 aa8.59□□□□□ -1.03
NUP85-221ENST00000583548 GAS2L2Q8NHY3 880 aa8.59□□□□□ -1.03
NUP85-221ENST00000583548 ZBTB12Q9Y330 459 aaPredicted RBP8.59□□□□□ -1.03
NUP85-221ENST00000583548 BTBD11A6QL63 1104 aa8.58□□□□□ -1.04
NUP85-221ENST00000583548 YDJCA8MPS7 323 aa8.58□□□□□ -1.04
NUP85-221ENST00000583548 PSMD14O00487 310 aa8.58□□□□□ -1.04
NUP85-221ENST00000583548 HMOX1P09601 288 aa8.58□□□□□ -1.04
NUP85-221ENST00000583548 NF2P35240 595 aa8.58□□□□□ -1.04
NUP85-221ENST00000583548 PIP4K2AP48426 406 aaPredicted RBP8.58□□□□□ -1.04
NUP85-221ENST00000583548 HLFQ16534 295 aa8.58□□□□□ -1.04
NUP85-221ENST00000583548 SLC4A8Q2Y0W8 1093 aa8.58□□□□□ -1.04
NUP85-221ENST00000583548 PPP1R42Q7Z4L9 355 aa8.58□□□□□ -1.04
NUP85-221ENST00000583548 EGFRP00533 1210 aa8.57□□□□□ -1.04
NUP85-221ENST00000583548 TTLL12Q14166 644 aaPredicted RBP8.57□□□□□ -1.04
NUP85-221ENST00000583548 IL17REQ8NFR9 667 aa8.57□□□□□ -1.04
NUP85-221ENST00000583548 ZNF333Q96JL9 665 aa8.57□□□□□ -1.04
NUP85-221ENST00000583548 EFCC1Q9HA90 598 aa8.57□□□□□ -1.04
NUP85-221ENST00000583548 ZNF609O15014 1411 aa8.56□□□□□ -1.04
NUP85-221ENST00000583548 SIPA1L3O60292 1781 aaPredicted RBP8.56□□□□□ -1.04
NUP85-221ENST00000583548 MANSC4A6NHS7 340 aaPredicted RBP8.56□□□□□ -1.04
NUP85-221ENST00000583548 UBE2Q2LH0YL09 131 aa8.56□□□□□ -1.04
NUP85-221ENST00000583548 WASHC4Q2M389 1173 aa8.56□□□□□ -1.04
NUP85-221ENST00000583548 SLC9C1Q4G0N8 1177 aa8.56□□□□□ -1.04
NUP85-221ENST00000583548 PARP10Q53GL7 1025 aa8.56□□□□□ -1.04
NUP85-221ENST00000583548 ANGEL2Q5VTE6 544 aaKnown RBP8.56□□□□□ -1.04
NUP85-221ENST00000583548 GPR153Q6NV75 609 aa8.56□□□□□ -1.04
NUP85-221ENST00000583548 KIF6Q6ZMV9 814 aa8.56□□□□□ -1.04
NUP85-221ENST00000583548 DPF3Q92784 378 aa8.56□□□□□ -1.04
NUP85-221ENST00000583548 HTATIP2Q9BUP3 242 aa8.56□□□□□ -1.04
NUP85-221ENST00000583548 NR2E3Q9Y5X4 410 aa8.56□□□□□ -1.04
NUP85-221ENST00000583548 CEMIPQ8WUJ3 1361 aa8.56□□□□□ -1.04
NUP85-221ENST00000583548 ABCC4O15439 1325 aa8.55□□□□□ -1.04
NUP85-221ENST00000583548 MAP3K15Q6ZN16 1313 aa8.55□□□□□ -1.04
NUP85-221ENST00000583548 NBPF26B4DH59 902 aa8.55□□□□□ -1.04
NUP85-221ENST00000583548 NTSR2O95665 410 aa8.55□□□□□ -1.04
NUP85-221ENST00000583548 OTUD7BQ6GQQ9 843 aa8.55□□□□□ -1.04
NUP85-221ENST00000583548 NBPF10Q6P3W6 841 aaKnown RBP8.55□□□□□ -1.04
NUP85-221ENST00000583548 DDX46Q7L014 1031 aaKnown RBP8.55□□□□□ -1.04
NUP85-221ENST00000583548 ARMC9Q7Z3E5 817 aa8.55□□□□□ -1.04
NUP85-221ENST00000583548 EYA3Q99504 573 aa8.55□□□□□ -1.04
NUP85-221ENST00000583548 COL25A1Q9BXS0 654 aaPredicted RBP8.55□□□□□ -1.04
NUP85-221ENST00000583548 PRO3102Q9H379 93 aa8.55□□□□□ -1.04
NUP85-221ENST00000583548 STXBP5LQ9Y2K9 1186 aa8.55□□□□□ -1.04
NUP85-221ENST00000583548 SCARF1Q14162 830 aa8.54□□□□□ -1.04
NUP85-221ENST00000583548 SLC10A5Q5PT55 438 aa8.54□□□□□ -1.04
NUP85-221ENST00000583548 SUSD4Q5VX71 490 aa8.54□□□□□ -1.04
NUP85-221ENST00000583548 SLC51AQ86UW1 340 aa8.54□□□□□ -1.04
NUP85-221ENST00000583548 IFNL1Q8IU54 200 aa8.54□□□□□ -1.04
NUP85-221ENST00000583548 R3HDMLQ9H3Y0 253 aa8.54□□□□□ -1.04
NUP85-221ENST00000583548 DBNDD1Q9H9R9 158 aa8.54□□□□□ -1.04
NUP85-221ENST00000583548 MKI67P46013 3256 aaKnown RBP8.54□□□□□ -1.04
NUP85-221ENST00000583548 DDX60Q8IY21 1712 aaKnown RBP8.54□□□□□ -1.04
NUP85-221ENST00000583548 TRIOBPQ9H2D6 2365 aa8.54□□□□□ -1.04
NUP85-221ENST00000583548 UBN2Q6ZU65 1347 aa8.54□□□□□ -1.04
NUP85-221ENST00000583548 KCNQ3O43525 872 aa8.53□□□□□ -1.04
NUP85-221ENST00000583548 ECE2O60344 883 aa8.53□□□□□ -1.04
NUP85-221ENST00000583548 DIAPH1O60610 1272 aaKnown RBP8.53□□□□□ -1.04
NUP85-221ENST00000583548 VIL1P09327 827 aaKnown RBP8.53□□□□□ -1.04
NUP85-221ENST00000583548 GPTP24298 496 aa8.53□□□□□ -1.04
NUP85-221ENST00000583548 ZNF280AP59817 542 aaPredicted RBP8.53□□□□□ -1.04
NUP85-221ENST00000583548 SP3Q02447 781 aa8.53□□□□□ -1.04
NUP85-221ENST00000583548 MKRN3Q13064 507 aaKnown RBP8.53□□□□□ -1.04
NUP85-221ENST00000583548 GRAPQ13588 217 aa8.53□□□□□ -1.04
NUP85-221ENST00000583548 SPRYD7Q5W111 196 aa8.53□□□□□ -1.04
NUP85-221ENST00000583548 MOB2Q70IA6 237 aa8.53□□□□□ -1.04
NUP85-221ENST00000583548 ZNF34Q8IZ26 560 aa8.53□□□□□ -1.04
NUP85-221ENST00000583548 AGBL3Q8NEM8 1001 aa8.53□□□□□ -1.04
NUP85-221ENST00000583548 NKX2-3Q8TAU0 364 aa8.53□□□□□ -1.04
NUP85-221ENST00000583548 GRAPLQ8TC17 118 aaPredicted RBP8.53□□□□□ -1.04
NUP85-221ENST00000583548 CD99L2Q8TCZ2 262 aa8.53□□□□□ -1.04
NUP85-221ENST00000583548 POLR2AP24928 1970 aaKnown RBP8.52□□□□□ -1.05
NUP85-221ENST00000583548 G3V3G9 751 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms