RNA–Protein interactions for RNA: ENST00000583070.5

NUP85-220, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-220ENST00000583070 CNKSR1Q969H4 720 aa13.55□□□□□ -0.24
NUP85-220ENST00000583070 CLUAP1Q96AJ1 413 aa13.55□□□□□ -0.24
NUP85-220ENST00000583070 CRAMP1Q96RY5 1269 aa13.55□□□□□ -0.24
NUP85-220ENST00000583070 A0A1B0GUL6 1792 aa13.55□□□□□ -0.24
NUP85-220ENST00000583070 NBPF7P0C2Y1 421 aaPredicted RBP13.54□□□□□ -0.24
NUP85-220ENST00000583070 RLBP1P12271 317 aa13.54□□□□□ -0.24
NUP85-220ENST00000583070 ALDH1B1P30837 517 aa13.54□□□□□ -0.24
NUP85-220ENST00000583070 DALRD3Q5D0E6 543 aaKnown RBP13.54□□□□□ -0.24
NUP85-220ENST00000583070 TMEM57Q8N5G2 664 aa13.54□□□□□ -0.24
NUP85-220ENST00000583070 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.54□□□□□ -0.24
NUP85-220ENST00000583070 RBM17Q96I25 401 aaKnown RBP13.54□□□□□ -0.24
NUP85-220ENST00000583070 LTBP1Q14766 1721 aa13.53□□□□□ -0.24
NUP85-220ENST00000583070 DICER1Q9UPY3 1922 aaKnown RBP13.53□□□□□ -0.24
NUP85-220ENST00000583070 CSF1RP07333 972 aa13.53□□□□□ -0.24
NUP85-220ENST00000583070 CCDC152Q4G0S7 254 aa13.53□□□□□ -0.24
NUP85-220ENST00000583070 PRPF40BQ6NWY9 871 aaKnown RBP13.53□□□□□ -0.24
NUP85-220ENST00000583070 TTLL11Q8NHH1 800 aa13.53□□□□□ -0.24
NUP85-220ENST00000583070 ZNF622Q969S3 477 aaKnown RBP eCLIP13.53□□□□□ -0.24
NUP85-220ENST00000583070 PLIN1O60240 522 aa13.52□□□□□ -0.25
NUP85-220ENST00000583070 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.25
NUP85-220ENST00000583070 FOXO4P98177 505 aa13.52□□□□□ -0.25
NUP85-220ENST00000583070 PDE3AQ14432 1141 aa13.52□□□□□ -0.25
NUP85-220ENST00000583070 DDX46Q7L014 1031 aaKnown RBP13.52□□□□□ -0.25
NUP85-220ENST00000583070 KAZALD1Q96I82 304 aa13.52□□□□□ -0.25
NUP85-220ENST00000583070 SUCLG2Q96I99 432 aa13.52□□□□□ -0.25
NUP85-220ENST00000583070 SNED1Q8TER0 1413 aa13.51□□□□□ -0.25
NUP85-220ENST00000583070 GNAI3P08754 354 aa13.51□□□□□ -0.25
NUP85-220ENST00000583070 UBTFL1P0CB47 393 aaPredicted RBP13.51□□□□□ -0.25
NUP85-220ENST00000583070 EPHA10Q5JZY3 1008 aa13.51□□□□□ -0.25
NUP85-220ENST00000583070 PANK1Q8TE04 598 aa13.51□□□□□ -0.25
NUP85-220ENST00000583070 C7orf43Q8WVR3 580 aa13.51□□□□□ -0.25
NUP85-220ENST00000583070 MEIS3Q99687 375 aa13.51□□□□□ -0.25
NUP85-220ENST00000583070 HDAC5Q9UQL6 1122 aa13.51□□□□□ -0.25
NUP85-220ENST00000583070 BCS1LQ9Y276 419 aa13.51□□□□□ -0.25
NUP85-220ENST00000583070 RRP1P56182 461 aaKnown RBP13.5□□□□□ -0.25
NUP85-220ENST00000583070 GRAPQ13588 217 aa13.5□□□□□ -0.25
NUP85-220ENST00000583070 RABL6Q3YEC7 729 aaPredicted RBP13.5□□□□□ -0.25
NUP85-220ENST00000583070 TMC4Q7Z404 712 aa13.5□□□□□ -0.25
NUP85-220ENST00000583070 ITPRIPQ8IWB1 547 aa13.5□□□□□ -0.25
NUP85-220ENST00000583070 GRAPLQ8TC17 118 aaPredicted RBP13.5□□□□□ -0.25
NUP85-220ENST00000583070 GREM2Q9H772 168 aa13.5□□□□□ -0.25
NUP85-220ENST00000583070 GRIN3BO60391 1043 aa13.49□□□□□ -0.25
NUP85-220ENST00000583070 BBOX1O75936 387 aa13.49□□□□□ -0.25
NUP85-220ENST00000583070 MVPQ14764 893 aaKnown RBP13.49□□□□□ -0.25
NUP85-220ENST00000583070 GPR162Q16538 588 aa13.49□□□□□ -0.25
NUP85-220ENST00000583070 SOGA3Q5TF21 947 aa13.49□□□□□ -0.25
NUP85-220ENST00000583070 LMBR1LQ6UX01 489 aa13.49□□□□□ -0.25
NUP85-220ENST00000583070 ANKRD44Q8N8A2 993 aa13.49□□□□□ -0.25
NUP85-220ENST00000583070 BICC1Q9H694 974 aaKnown RBP13.49□□□□□ -0.25
NUP85-220ENST00000583070 WWC3Q9ULE0 1092 aa13.49□□□□□ -0.25
NUP85-220ENST00000583070 PPEF1O14829 653 aaPredicted RBP13.48□□□□□ -0.25
NUP85-220ENST00000583070 ZBTB7BO15156 539 aaPredicted RBP13.48□□□□□ -0.25
NUP85-220ENST00000583070 FAM161AQ3B820 660 aa13.48□□□□□ -0.25
NUP85-220ENST00000583070 C20orf194Q5TEA3 1177 aa13.48□□□□□ -0.25
NUP85-220ENST00000583070 PELP1Q8IZL8 1130 aaKnown RBP13.48□□□□□ -0.25
NUP85-220ENST00000583070 CELF1Q92879 486 aaKnown RBP13.48□□□□□ -0.25
NUP85-220ENST00000583070 CDC5LQ99459 802 aaKnown RBP13.48□□□□□ -0.25
NUP85-220ENST00000583070 SEC31BQ9NQW1 1179 aa13.48□□□□□ -0.25
NUP85-220ENST00000583070 DDX19BQ9UMR2 479 aa13.48□□□□□ -0.25
NUP85-220ENST00000583070 DUOX1Q9NRD9 1551 aa13.47□□□□□ -0.25
NUP85-220ENST00000583070 DCAF8L1A6NGE4 600 aa13.47□□□□□ -0.25
NUP85-220ENST00000583070 C21orf2O43822 256 aa13.47□□□□□ -0.25
NUP85-220ENST00000583070 ITGA6P23229 1130 aa13.47□□□□□ -0.25
NUP85-220ENST00000583070 RPS8P62241 208 aaKnown RBP13.47□□□□□ -0.25
NUP85-220ENST00000583070 CC2D2BQ6DHV5 1058 aa13.47□□□□□ -0.25
NUP85-220ENST00000583070 CCDC85AQ96PX6 553 aaPredicted RBP13.47□□□□□ -0.25
NUP85-220ENST00000583070 ATP6V0A2Q9Y487 856 aa13.47□□□□□ -0.25
NUP85-220ENST00000583070 LRRFIP2Q9Y608 721 aaKnown RBP13.47□□□□□ -0.25
NUP85-220ENST00000583070 TIAM2Q8IVF5 1701 aa13.47□□□□□ -0.25
NUP85-220ENST00000583070 LTBP3Q9NS15 1303 aa13.46□□□□□ -0.25
NUP85-220ENST00000583070 GNAI2P04899 355 aa13.46□□□□□ -0.25
NUP85-220ENST00000583070 IFIT5Q13325 482 aaKnown RBP13.46□□□□□ -0.25
NUP85-220ENST00000583070 MTX1Q13505 466 aa13.46□□□□□ -0.25
NUP85-220ENST00000583070 GRIPAP1Q4V328 841 aa13.46□□□□□ -0.25
NUP85-220ENST00000583070 CCDC93Q567U6 631 aa13.46□□□□□ -0.25
NUP85-220ENST00000583070 ANKRD18AQ8IVF6 992 aa13.46□□□□□ -0.25
NUP85-220ENST00000583070 SP8Q8IXZ3 490 aa13.46□□□□□ -0.25
NUP85-220ENST00000583070 COG6Q9Y2V7 657 aa13.46□□□□□ -0.25
NUP85-220ENST00000583070 ANKRD18BA2A2Z9 1011 aa13.45□□□□□ -0.26
NUP85-220ENST00000583070 CCDC57Q2TAC2 916 aa13.45□□□□□ -0.26
NUP85-220ENST00000583070 CHMP4BQ9H444 224 aaKnown RBP13.45□□□□□ -0.26
NUP85-220ENST00000583070 BSDC1Q9NW68 430 aaPredicted RBP13.45□□□□□ -0.26
NUP85-220ENST00000583070 NFKBIEO00221 500 aa13.44□□□□□ -0.26
NUP85-220ENST00000583070 OLFM4Q6UX06 510 aa13.44□□□□□ -0.26
NUP85-220ENST00000583070 RTKN2Q8IZC4 609 aa13.44□□□□□ -0.26
NUP85-220ENST00000583070 ZBTB40Q9NUA8 1239 aa13.44□□□□□ -0.26
NUP85-220ENST00000583070 ZNF219Q9P2Y4 722 aaPredicted RBP13.44□□□□□ -0.26
NUP85-220ENST00000583070 CHMP3Q9Y3E7 222 aa13.44□□□□□ -0.26
NUP85-220ENST00000583070 IGHMBP2P38935 993 aaKnown RBP13.43□□□□□ -0.26
NUP85-220ENST00000583070 RFX5P48382 616 aaPredicted RBP13.43□□□□□ -0.26
NUP85-220ENST00000583070 SLC51AQ86UW1 340 aa13.43□□□□□ -0.26
NUP85-220ENST00000583070 PSMD1Q99460 953 aa13.43□□□□□ -0.26
NUP85-220ENST00000583070 PSME4Q14997 1843 aa13.42□□□□□ -0.26
NUP85-220ENST00000583070 FKBP4Q02790 459 aaKnown RBP eCLIP13.42□□□□□ -0.26
NUP85-220ENST00000583070 ARHGAP27Q6ZUM4 889 aa13.42□□□□□ -0.26
NUP85-220ENST00000583070 MPHOSPH8Q99549 860 aa13.42□□□□□ -0.26
NUP85-220ENST00000583070 RTFDC1Q9BY42 306 aaPredicted RBP13.42□□□□□ -0.26
NUP85-220ENST00000583070 TMX4Q9H1E5 349 aaPredicted RBP13.42□□□□□ -0.26
NUP85-220ENST00000583070 TAOK3Q9H2K8 898 aa13.42□□□□□ -0.26
NUP85-220ENST00000583070 PODXL2Q9NZ53 605 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms