RNA–Protein interactions for RNA: ENST00000582985.1

DDX42-215, Transcript of DEAD-box helicase 42, human

TSL 4

Gene DDX42, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX42-215	ENST00000582985	COPS6	Q7L5N1	327 aa		12.51	□□□□□ -0.41
DDX42-215	ENST00000582985	NLRP10	Q86W26	655 aa		12.51	□□□□□ -0.41
DDX42-215	ENST00000582985	XAGE3	Q8WTP9	111 aa		12.51	□□□□□ -0.41
DDX42-215	ENST00000582985	NECTIN2	Q92692	538 aa		12.51	□□□□□ -0.41
DDX42-215	ENST00000582985	VPS33B	Q9H267	617 aa		12.51	□□□□□ -0.41
DDX42-215	ENST00000582985	PRDM10	Q9NQV6	1147 aa		12.51	□□□□□ -0.41
DDX42-215	ENST00000582985	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
DDX42-215	ENST00000582985	WBP1L	Q9NX94	342 aa		12.51	□□□□□ -0.41
DDX42-215	ENST00000582985	ABT1	Q9ULW3	272 aa	Known RBP	12.51	□□□□□ -0.41
DDX42-215	ENST00000582985	HCLS1	P14317	486 aa	Predicted RBP	12.5	□□□□□ -0.41
DDX42-215	ENST00000582985	HSP90AB3P	Q58FF7	597 aa		12.5	□□□□□ -0.41
DDX42-215	ENST00000582985	USP50	Q70EL3	339 aa	Predicted RBP	12.5	□□□□□ -0.41
DDX42-215	ENST00000582985	SUPT20H	Q8NEM7	779 aa		12.5	□□□□□ -0.41
DDX42-215	ENST00000582985	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.5	□□□□□ -0.41
DDX42-215	ENST00000582985	ANKRD36C	Q5JPF3	1778 aa		12.49	□□□□□ -0.41
DDX42-215	ENST00000582985	WDR33	Q9C0J8	1336 aa	Known RBP	12.49	□□□□□ -0.41
DDX42-215	ENST00000582985	BBOX1	O75936	387 aa		12.49	□□□□□ -0.41
DDX42-215	ENST00000582985	PRKAR2A	P13861	404 aa	Known RBP	12.49	□□□□□ -0.41
DDX42-215	ENST00000582985	FMR1	Q06787	632 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
DDX42-215	ENST00000582985	TCIRG1	Q13488	830 aa		12.49	□□□□□ -0.41
DDX42-215	ENST00000582985	NEUROD2	Q15784	382 aa		12.49	□□□□□ -0.41
DDX42-215	ENST00000582985	SP8	Q8IXZ3	490 aa		12.49	□□□□□ -0.41
DDX42-215	ENST00000582985	GPRC5D	Q9NZD1	345 aa		12.49	□□□□□ -0.41
DDX42-215	ENST00000582985	TRMT112	Q9UI30	125 aa	Known RBP	12.49	□□□□□ -0.41
DDX42-215	ENST00000582985	ZNRF3	Q9ULT6	936 aa		12.49	□□□□□ -0.41
DDX42-215	ENST00000582985	SH3TC1	Q8TE82	1336 aa		12.48	□□□□□ -0.41
DDX42-215	ENST00000582985	CHL1	O00533	1208 aa		12.48	□□□□□ -0.41
DDX42-215	ENST00000582985	CXCL9	Q07325	125 aa		12.48	□□□□□ -0.41
DDX42-215	ENST00000582985	KRT24	Q2M2I5	525 aa		12.48	□□□□□ -0.41
DDX42-215	ENST00000582985	DPP8	Q6V1X1	898 aa	Predicted RBP	12.48	□□□□□ -0.41
DDX42-215	ENST00000582985	DDX46	Q7L014	1031 aa	Known RBP	12.48	□□□□□ -0.41
DDX42-215	ENST00000582985	CCDC146	Q8IYE0	955 aa		12.48	□□□□□ -0.41
DDX42-215	ENST00000582985	MPND	Q8N594	471 aa		12.48	□□□□□ -0.41
DDX42-215	ENST00000582985	ADARB2	Q9NS39	739 aa	Known RBP	12.48	□□□□□ -0.41
DDX42-215	ENST00000582985	LAMB2	P55268	1798 aa		12.48	□□□□□ -0.41
DDX42-215	ENST00000582985	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.47	□□□□□ -0.41
DDX42-215	ENST00000582985	TRAF5	O00463	557 aa		12.47	□□□□□ -0.41
DDX42-215	ENST00000582985	LBX1	P52954	281 aa		12.47	□□□□□ -0.41
DDX42-215	ENST00000582985	MAP2K1	Q02750	393 aa	Predicted RBP	12.47	□□□□□ -0.41
DDX42-215	ENST00000582985	GRAP	Q13588	217 aa		12.47	□□□□□ -0.41
DDX42-215	ENST00000582985	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.47	□□□□□ -0.41
DDX42-215	ENST00000582985	GRAPL	Q8TC17	118 aa	Predicted RBP	12.47	□□□□□ -0.41
DDX42-215	ENST00000582985	CHPF2	Q9P2E5	772 aa		12.47	□□□□□ -0.41
DDX42-215	ENST00000582985	TRIM35	Q9UPQ4	493 aa		12.47	□□□□□ -0.41
DDX42-215	ENST00000582985	LAS1L	Q9Y4W2	734 aa	Known RBP	12.47	□□□□□ -0.41
DDX42-215	ENST00000582985	GMPS	P49915	693 aa	Predicted RBP	12.46	□□□□□ -0.41
DDX42-215	ENST00000582985	KIAA2012	Q0VF49	1180 aa		12.46	□□□□□ -0.41
DDX42-215	ENST00000582985	CST9	Q5W186	159 aa		12.46	□□□□□ -0.41
DDX42-215	ENST00000582985	RUNDC1	Q96C34	613 aa		12.46	□□□□□ -0.41
DDX42-215	ENST00000582985	CAPNS2	Q96L46	248 aa		12.46	□□□□□ -0.41
DDX42-215	ENST00000582985	RAD17	O75943	681 aa		12.45	□□□□□ -0.42
DDX42-215	ENST00000582985	HSPA8	P11142	646 aa	Known RBP	12.45	□□□□□ -0.42
DDX42-215	ENST00000582985	ECE1	P42892	770 aa		12.45	□□□□□ -0.42
DDX42-215	ENST00000582985	HDGFL1	Q5TGJ6	251 aa		12.45	□□□□□ -0.42
DDX42-215	ENST00000582985	CIAPIN1	Q6FI81	312 aa		12.45	□□□□□ -0.42
DDX42-215	ENST00000582985	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.45	□□□□□ -0.42
DDX42-215	ENST00000582985	PLBD2	Q8NHP8	589 aa		12.45	□□□□□ -0.42
DDX42-215	ENST00000582985	ZNF428	Q96B54	188 aa		12.45	□□□□□ -0.42
DDX42-215	ENST00000582985	THSD7B	Q9C0I4	1608 aa		12.44	□□□□□ -0.42
DDX42-215	ENST00000582985	CDHR2	Q9BYE9	1310 aa		12.44	□□□□□ -0.42
DDX42-215	ENST00000582985	HOXB7	P09629	217 aa		12.44	□□□□□ -0.42
DDX42-215	ENST00000582985	DDX10	Q13206	875 aa	Known RBP	12.44	□□□□□ -0.42
DDX42-215	ENST00000582985	GRM1	Q13255	1194 aa		12.44	□□□□□ -0.42
DDX42-215	ENST00000582985	TNIP1	Q15025	636 aa		12.44	□□□□□ -0.42
DDX42-215	ENST00000582985	WDR43	Q15061	677 aa	Known RBP eCLIP	12.44	□□□□□ -0.42
DDX42-215	ENST00000582985	CYP4F22	Q6NT55	531 aa		12.44	□□□□□ -0.42
DDX42-215	ENST00000582985	ANKRD13D	Q6ZTN6	518 aa		12.44	□□□□□ -0.42
DDX42-215	ENST00000582985	TMC4	Q7Z404	712 aa		12.44	□□□□□ -0.42
DDX42-215	ENST00000582985	BCL2L13	Q9BXK5	485 aa		12.44	□□□□□ -0.42
DDX42-215	ENST00000582985	TLL2	Q9Y6L7	1015 aa		12.44	□□□□□ -0.42
DDX42-215	ENST00000582985	TRPM7	Q96QT4	1865 aa		12.44	□□□□□ -0.42
DDX42-215	ENST00000582985	DUOX1	Q9NRD9	1551 aa		12.43	□□□□□ -0.42
DDX42-215	ENST00000582985	TAF1	P21675	1872 aa		12.43	□□□□□ -0.42
DDX42-215	ENST00000582985	YDJC	A8MPS7	323 aa		12.43	□□□□□ -0.42
DDX42-215	ENST00000582985	FAM89A	Q96GI7	184 aa		12.43	□□□□□ -0.42
DDX42-215	ENST00000582985	GPR101	Q96P66	508 aa	Predicted RBP	12.43	□□□□□ -0.42
DDX42-215	ENST00000582985	ISCA1	Q9BUE6	129 aa		12.43	□□□□□ -0.42
DDX42-215	ENST00000582985	GLIS2	Q9BZE0	524 aa	Predicted RBP	12.43	□□□□□ -0.42
DDX42-215	ENST00000582985	DBF4	Q9UBU7	674 aa	Predicted RBP	12.43	□□□□□ -0.42
DDX42-215	ENST00000582985	PGAP2	Q9UHJ9	254 aa		12.43	□□□□□ -0.42
DDX42-215	ENST00000582985	ADAMTS8	Q9UP79	889 aa		12.43	□□□□□ -0.42
DDX42-215	ENST00000582985	LRRC37A	A6NMS7	1700 aa		12.42	□□□□□ -0.42
DDX42-215	ENST00000582985	DDX60	Q8IY21	1712 aa	Known RBP	12.42	□□□□□ -0.42
DDX42-215	ENST00000582985	ATP5J2-PTCD1	G3V325	749 aa		12.42	□□□□□ -0.42
DDX42-215	ENST00000582985	CELF2	O95319	508 aa	Known RBP	12.42	□□□□□ -0.42
DDX42-215	ENST00000582985	HIRA	P54198	1017 aa	Predicted RBP	12.42	□□□□□ -0.42
DDX42-215	ENST00000582985	SF3B3	Q15393	1217 aa	Known RBP	12.42	□□□□□ -0.42
DDX42-215	ENST00000582985	SAPCD2	Q86UD0	394 aa		12.42	□□□□□ -0.42
DDX42-215	ENST00000582985	TRPM4	Q8TD43	1214 aa		12.42	□□□□□ -0.42
DDX42-215	ENST00000582985	ZC3H15	Q8WU90	426 aa	Known RBP	12.42	□□□□□ -0.42
DDX42-215	ENST00000582985	CELF1	Q92879	486 aa	Known RBP	12.42	□□□□□ -0.42
DDX42-215	ENST00000582985	CFAP44	Q96MT7	982 aa		12.42	□□□□□ -0.42
DDX42-215	ENST00000582985	HYPK	Q9NX55	129 aa		12.42	□□□□□ -0.42
DDX42-215	ENST00000582985	CNOT7	Q9UIV1	285 aa	Known RBP	12.42	□□□□□ -0.42
DDX42-215	ENST00000582985	SHTN1	A0MZ66	631 aa		12.41	□□□□□ -0.42
DDX42-215	ENST00000582985	WASHC4	Q2M389	1173 aa		12.41	□□□□□ -0.42
DDX42-215	ENST00000582985	DUSP27	Q5VZP5	1158 aa		12.41	□□□□□ -0.42
DDX42-215	ENST00000582985	BEGAIN	Q9BUH8	593 aa		12.41	□□□□□ -0.42
DDX42-215	ENST00000582985	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.41	□□□□□ -0.42
DDX42-215	ENST00000582985		H7C1D1	291 aa		12.4	□□□□□ -0.42

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