RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 WWC3Q9ULE0 1092 aa15.24■□□□□ 0.03
SNRPD1-204ENST00000582475 CCT4P50991 539 aaKnown RBP15.23■□□□□ 0.03
SNRPD1-204ENST00000582475 C3orf67Q6ZVT6 689 aa15.23■□□□□ 0.03
SNRPD1-204ENST00000582475 PELP1Q8IZL8 1130 aaKnown RBP15.23■□□□□ 0.03
SNRPD1-204ENST00000582475 PLCD3Q8N3E9 789 aa15.23■□□□□ 0.03
SNRPD1-204ENST00000582475 C9orf78Q9NZ63 289 aaPredicted RBP15.23■□□□□ 0.03
SNRPD1-204ENST00000582475 PXDNLA1KZ92 1463 aa15.22■□□□□ 0.03
SNRPD1-204ENST00000582475 ANKRD36CQ5JPF3 1778 aa15.22■□□□□ 0.03
SNRPD1-204ENST00000582475 PDE8AO60658 829 aa15.22■□□□□ 0.03
SNRPD1-204ENST00000582475 TRIM27P14373 513 aa15.22■□□□□ 0.03
SNRPD1-204ENST00000582475 NPR1P16066 1061 aa15.22■□□□□ 0.03
SNRPD1-204ENST00000582475 GPR162Q16538 588 aa15.22■□□□□ 0.03
SNRPD1-204ENST00000582475 DALRD3Q5D0E6 543 aaKnown RBP15.22■□□□□ 0.03
SNRPD1-204ENST00000582475 STYK1Q6J9G0 422 aa15.22■□□□□ 0.03
SNRPD1-204ENST00000582475 UBE3BQ7Z3V4 1068 aa15.22■□□□□ 0.03
SNRPD1-204ENST00000582475 TTLL6Q8N841 843 aa15.22■□□□□ 0.03
SNRPD1-204ENST00000582475 CNKSR1Q969H4 720 aa15.22■□□□□ 0.03
SNRPD1-204ENST00000582475 TNNQ9UQP3 1299 aa15.22■□□□□ 0.03
SNRPD1-204ENST00000582475 KIF13BQ9NQT8 1826 aa15.22■□□□□ 0.03
SNRPD1-204ENST00000582475 CDHR2Q9BYE9 1310 aa15.21■□□□□ 0.03
SNRPD1-204ENST00000582475 GRM8O00222 908 aa15.21■□□□□ 0.03
SNRPD1-204ENST00000582475 ALDH1B1P30837 517 aa15.21■□□□□ 0.03
SNRPD1-204ENST00000582475 CASP7P55210 303 aa15.21■□□□□ 0.03
SNRPD1-204ENST00000582475 SF3B3Q15393 1217 aaKnown RBP15.21■□□□□ 0.03
SNRPD1-204ENST00000582475 CRY2Q49AN0 593 aa15.21■□□□□ 0.03
SNRPD1-204ENST00000582475 RPGRQ92834 1020 aaKnown RBP15.21■□□□□ 0.03
SNRPD1-204ENST00000582475 CLUAP1Q96AJ1 413 aa15.21■□□□□ 0.03
SNRPD1-204ENST00000582475 RBM17Q96I25 401 aaKnown RBP15.21■□□□□ 0.03
SNRPD1-204ENST00000582475 BCS1LQ9Y276 419 aa15.21■□□□□ 0.03
SNRPD1-204ENST00000582475 HOXA10P31260 410 aaPredicted RBP15.2■□□□□ 0.02
SNRPD1-204ENST00000582475 PHF12Q96QT6 1004 aa15.2■□□□□ 0.02
SNRPD1-204ENST00000582475 RIC1Q4ADV7 1423 aa15.19■□□□□ 0.02
SNRPD1-204ENST00000582475 INTS3Q68E01 1043 aaKnown RBP15.19■□□□□ 0.02
SNRPD1-204ENST00000582475 CRAMP1Q96RY5 1269 aa15.19■□□□□ 0.02
SNRPD1-204ENST00000582475 PLA2G12BQ9BX93 195 aa15.19■□□□□ 0.02
SNRPD1-204ENST00000582475 USP44Q9H0E7 712 aa15.19■□□□□ 0.02
SNRPD1-204ENST00000582475 N4BP2Q86UW6 1770 aaPredicted RBP15.19■□□□□ 0.02
SNRPD1-204ENST00000582475 ABCC4O15439 1325 aa15.18■□□□□ 0.02
SNRPD1-204ENST00000582475 ANKRD31Q8N7Z5 1873 aa15.18■□□□□ 0.02
SNRPD1-204ENST00000582475 NBPF7P0C2Y1 421 aaPredicted RBP15.18■□□□□ 0.02
SNRPD1-204ENST00000582475 YBX3P16989 372 aaKnown RBP eCLIP15.18■□□□□ 0.022e-14■□□□□ 10.9
SNRPD1-204ENST00000582475 DDX46Q7L014 1031 aaKnown RBP15.18■□□□□ 0.02
SNRPD1-204ENST00000582475 DZIP1LQ8IYY4 767 aaKnown RBP15.18■□□□□ 0.02
SNRPD1-204ENST00000582475 PLIN1O60240 522 aa15.17■□□□□ 0.02
SNRPD1-204ENST00000582475 GRIN3BO60391 1043 aa15.17■□□□□ 0.02
SNRPD1-204ENST00000582475 MS4A1P11836 297 aa15.17■□□□□ 0.02
SNRPD1-204ENST00000582475 CCDC152Q4G0S7 254 aa15.17■□□□□ 0.02
SNRPD1-204ENST00000582475 FTSJ3Q8IY81 847 aaKnown RBP15.17■□□□□ 0.02
SNRPD1-204ENST00000582475 TMEM57Q8N5G2 664 aa15.17■□□□□ 0.02
SNRPD1-204ENST00000582475 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.17■□□□□ 0.02
SNRPD1-204ENST00000582475 TTLL11Q8NHH1 800 aa15.17■□□□□ 0.02
SNRPD1-204ENST00000582475 CCDC85AQ96PX6 553 aaPredicted RBP15.17■□□□□ 0.02
SNRPD1-204ENST00000582475 UTYO14607 1347 aa15.17■□□□□ 0.02
SNRPD1-204ENST00000582475 BBOX1O75936 387 aa15.16■□□□□ 0.02
SNRPD1-204ENST00000582475 CSF1RP07333 972 aa15.16■□□□□ 0.02
SNRPD1-204ENST00000582475 CTSWP56202 376 aa15.16■□□□□ 0.02
SNRPD1-204ENST00000582475 PRPF40BQ6NWY9 871 aaKnown RBP15.16■□□□□ 0.02
SNRPD1-204ENST00000582475 SUCLG2Q96I99 432 aa15.16■□□□□ 0.02
SNRPD1-204ENST00000582475 TSPYL2Q9H2G4 693 aaPredicted RBP15.16■□□□□ 0.02
SNRPD1-204ENST00000582475 KIAA1551Q9HCM1 1747 aa15.15■□□□□ 0.02
SNRPD1-204ENST00000582475 C21orf2O43822 256 aa15.15■□□□□ 0.02
SNRPD1-204ENST00000582475 RLBP1P12271 317 aa15.15■□□□□ 0.02
SNRPD1-204ENST00000582475 FOXO4P98177 505 aa15.15■□□□□ 0.02
SNRPD1-204ENST00000582475 GRAPQ13588 217 aa15.15■□□□□ 0.02
SNRPD1-204ENST00000582475 GRAPLQ8TC17 118 aaPredicted RBP15.15■□□□□ 0.02
SNRPD1-204ENST00000582475 GALR2O43603 387 aaPredicted RBP15.14■□□□□ 0.01
SNRPD1-204ENST00000582475 EPHA10Q5JZY3 1008 aa15.14■□□□□ 0.01
SNRPD1-204ENST00000582475 ARHGAP27Q6ZUM4 889 aa15.14■□□□□ 0.01
SNRPD1-204ENST00000582475 PANK1Q8TE04 598 aa15.14■□□□□ 0.01
SNRPD1-204ENST00000582475 C7orf43Q8WVR3 580 aa15.14■□□□□ 0.01
SNRPD1-204ENST00000582475 KAZALD1Q96I82 304 aa15.14■□□□□ 0.01
SNRPD1-204ENST00000582475 SEC31BQ9NQW1 1179 aa15.14■□□□□ 0.01
SNRPD1-204ENST00000582475 HDAC5Q9UQL6 1122 aa15.14■□□□□ 0.01
SNRPD1-204ENST00000582475 UBTFL1P0CB47 393 aaPredicted RBP15.13■□□□□ 0.01
SNRPD1-204ENST00000582475 POTEIP0CG38 1075 aa15.13■□□□□ 0.01
SNRPD1-204ENST00000582475 RPS8P62241 208 aaKnown RBP15.13■□□□□ 0.01
SNRPD1-204ENST00000582475 LMBR1LQ6UX01 489 aa15.13■□□□□ 0.01
SNRPD1-204ENST00000582475 CELF1Q92879 486 aaKnown RBP15.13■□□□□ 0.01
SNRPD1-204ENST00000582475 MEIS3Q99687 375 aa15.13■□□□□ 0.01
SNRPD1-204ENST00000582475 GREM2Q9H772 168 aa15.13■□□□□ 0.01
SNRPD1-204ENST00000582475 CHMP3Q9Y3E7 222 aa15.13■□□□□ 0.01
SNRPD1-204ENST00000582475 TNRC6CQ9HCJ0 1690 aaKnown RBP15.12■□□□□ 0.01
SNRPD1-204ENST00000582475 PPEF1O14829 653 aaPredicted RBP15.12■□□□□ 0.01
SNRPD1-204ENST00000582475 GNAI3P08754 354 aa15.12■□□□□ 0.01
SNRPD1-204ENST00000582475 ITPRIPQ8IWB1 547 aa15.12■□□□□ 0.01
SNRPD1-204ENST00000582475 DCBLD2Q96PD2 775 aa15.12■□□□□ 0.01
SNRPD1-204ENST00000582475 ITGA6P23229 1130 aa15.11■□□□□ 0.01
SNRPD1-204ENST00000582475 PDE3AQ14432 1141 aa15.11■□□□□ 0.01
SNRPD1-204ENST00000582475 SOGA3Q5TF21 947 aa15.11■□□□□ 0.01
SNRPD1-204ENST00000582475 ANKRD18AQ8IVF6 992 aa15.11■□□□□ 0.01
SNRPD1-204ENST00000582475 SP8Q8IXZ3 490 aa15.11■□□□□ 0.01
SNRPD1-204ENST00000582475 CDC5LQ99459 802 aaKnown RBP15.11■□□□□ 0.01
SNRPD1-204ENST00000582475 TMX4Q9H1E5 349 aaPredicted RBP15.11■□□□□ 0.01
SNRPD1-204ENST00000582475 BICC1Q9H694 974 aaKnown RBP15.11■□□□□ 0.01
SNRPD1-204ENST00000582475 ATP6V0A2Q9Y487 856 aa15.11■□□□□ 0.01
SNRPD1-204ENST00000582475 DDX60Q8IY21 1712 aaKnown RBP15.11■□□□□ 0.01
SNRPD1-204ENST00000582475 SLX4Q8IY92 1834 aa15.1■□□□□ 0.01
SNRPD1-204ENST00000582475 COL11A2P13942 1736 aaPredicted RBP15.1■□□□□ 0.01
SNRPD1-204ENST00000582475 ANKRD18BA2A2Z9 1011 aa15.1■□□□□ 0.01
SNRPD1-204ENST00000582475 ZBTB7BO15156 539 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms