RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 NLRP10Q86W26 655 aa17.88■□□□□ 0.45
MKS1-211ENST00000581761 ZBTB38Q8NAP3 1195 aaPredicted RBP17.88■□□□□ 0.45
MKS1-211ENST00000581761 AK7Q96M32 723 aa17.88■□□□□ 0.45
MKS1-211ENST00000581761 ECHDC1Q9NTX5 307 aa17.88■□□□□ 0.45
MKS1-211ENST00000581761 ANKRD36CQ5JPF3 1778 aa17.88■□□□□ 0.45
MKS1-211ENST00000581761 GLRX3O76003 335 aaKnown RBP17.87■□□□□ 0.45
MKS1-211ENST00000581761 RC3H1Q5TC82 1133 aaKnown RBP17.87■□□□□ 0.45
MKS1-211ENST00000581761 MTFR1LQ9H019 292 aa17.87■□□□□ 0.45
MKS1-211ENST00000581761 CNTNAP4Q9C0A0 1308 aa17.87■□□□□ 0.45
MKS1-211ENST00000581761 COL5A3P25940 1745 aaPredicted RBP17.86■□□□□ 0.45
MKS1-211ENST00000581761 GNPATO15228 680 aa17.86■□□□□ 0.45
MKS1-211ENST00000581761 MAP4K4O95819 1239 aaPredicted RBP17.86■□□□□ 0.45
MKS1-211ENST00000581761 PTGER2P43116 358 aa17.86■□□□□ 0.45
MKS1-211ENST00000581761 CNTROBQ8N137 903 aa17.86■□□□□ 0.45
MKS1-211ENST00000581761 EAF2Q96CJ1 260 aaPredicted RBP17.86■□□□□ 0.45
MKS1-211ENST00000581761 PLA2G12BQ9BX93 195 aa17.86■□□□□ 0.45
MKS1-211ENST00000581761 CCDC8Q9H0W5 538 aaPredicted RBP17.86■□□□□ 0.45
MKS1-211ENST00000581761 CDHR2Q9BYE9 1310 aa17.86■□□□□ 0.45
MKS1-211ENST00000581761 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.85■□□□□ 0.45
MKS1-211ENST00000581761 PHF14O94880 888 aa17.85■□□□□ 0.45
MKS1-211ENST00000581761 TFCP2Q12800 502 aa17.85■□□□□ 0.45
MKS1-211ENST00000581761 FAM89AQ96GI7 184 aa17.85■□□□□ 0.45
MKS1-211ENST00000581761 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.85■□□□□ 0.45
MKS1-211ENST00000581761 MYH14Q7Z406 1995 aaKnown RBP17.84■□□□□ 0.45
MKS1-211ENST00000581761 NUP98P52948 1817 aa17.84■□□□□ 0.45
MKS1-211ENST00000581761 QSER1Q2KHR3 1735 aa17.84■□□□□ 0.45
MKS1-211ENST00000581761 REC8O95072 547 aa17.84■□□□□ 0.45
MKS1-211ENST00000581761 CHMLP26374 656 aa17.84■□□□□ 0.45
MKS1-211ENST00000581761 HMGB2P26583 209 aaKnown RBP17.84■□□□□ 0.45
MKS1-211ENST00000581761 ZNF34Q8IZ26 560 aa17.84■□□□□ 0.45
MKS1-211ENST00000581761 UBR3Q6ZT12 1888 aa17.84■□□□□ 0.45
MKS1-211ENST00000581761 RPS6KA4O75676 772 aa17.83■□□□□ 0.44
MKS1-211ENST00000581761 CAMTA2O94983 1202 aa17.83■□□□□ 0.44
MKS1-211ENST00000581761 SSFA2P28290 1259 aa17.83■□□□□ 0.44
MKS1-211ENST00000581761 SGIP1Q9BQI5 828 aa17.83■□□□□ 0.44
MKS1-211ENST00000581761 ESYT1Q9BSJ8 1104 aa17.83■□□□□ 0.44
MKS1-211ENST00000581761 USP26Q9BXU7 913 aa17.83■□□□□ 0.44
MKS1-211ENST00000581761 TLR7Q9NYK1 1049 aaKnown RBP17.83■□□□□ 0.44
MKS1-211ENST00000581761 TRMT112Q9UI30 125 aaKnown RBP17.83■□□□□ 0.44
MKS1-211ENST00000581761 IL15P40933 162 aaPredicted RBP17.82■□□□□ 0.44
MKS1-211ENST00000581761 TNNI3KQ59H18 835 aa17.82■□□□□ 0.44
MKS1-211ENST00000581761 ZNF594Q96JF6 807 aaPredicted RBP17.82■□□□□ 0.44
MKS1-211ENST00000581761 RTCBQ9Y3I0 505 aaKnown RBP17.82■□□□□ 0.44
MKS1-211ENST00000581761 FPGT-TNNI3KV9GXZ4 949 aa17.82■□□□□ 0.44
MKS1-211ENST00000581761 UBN2Q6ZU65 1347 aa17.81■□□□□ 0.44
MKS1-211ENST00000581761 EYA2O00167 538 aa17.81■□□□□ 0.44
MKS1-211ENST00000581761 IRS4O14654 1257 aaPredicted RBP17.81■□□□□ 0.44
MKS1-211ENST00000581761 CCDC57Q2TAC2 916 aa17.81■□□□□ 0.44
MKS1-211ENST00000581761 FLAD1Q8NFF5 587 aa17.81■□□□□ 0.44
MKS1-211ENST00000581761 SLC16A10Q8TF71 515 aa17.81■□□□□ 0.44
MKS1-211ENST00000581761 ARHGEF1Q92888 912 aaKnown RBP17.81■□□□□ 0.44
MKS1-211ENST00000581761 TBC1D2Q9BYX2 928 aa17.81■□□□□ 0.44
MKS1-211ENST00000581761 AK9Q5TCS8 1911 aa17.8■□□□□ 0.44
MKS1-211ENST00000581761 CIAO1O76071 339 aa17.8■□□□□ 0.44
MKS1-211ENST00000581761 CSF1RP07333 972 aa17.8■□□□□ 0.44
MKS1-211ENST00000581761 TAF7LQ5H9L4 462 aa17.8■□□□□ 0.44
MKS1-211ENST00000581761 ATG9AQ7Z3C6 839 aa17.8■□□□□ 0.44
MKS1-211ENST00000581761 SYNE4Q8N205 404 aa17.8■□□□□ 0.44
MKS1-211ENST00000581761 CCDC85AQ96PX6 553 aaPredicted RBP17.8■□□□□ 0.44
MKS1-211ENST00000581761 CTSWP56202 376 aa17.79■□□□□ 0.44
MKS1-211ENST00000581761 PARP10Q53GL7 1025 aa17.79■□□□□ 0.44
MKS1-211ENST00000581761 TRAPPC3LQ5T215 181 aa17.79■□□□□ 0.44
MKS1-211ENST00000581761 MSL1Q68DK7 614 aa17.79■□□□□ 0.44
MKS1-211ENST00000581761 HSCBQ8IWL3 235 aa17.79■□□□□ 0.44
MKS1-211ENST00000581761 ZNF652Q9Y2D9 606 aa17.79■□□□□ 0.44
MKS1-211ENST00000581761 PDE8AO60658 829 aa17.78■□□□□ 0.44
MKS1-211ENST00000581761 IFIT5Q13325 482 aaKnown RBP17.78■□□□□ 0.44
MKS1-211ENST00000581761 LRRC24Q50LG9 513 aa17.78■□□□□ 0.44
MKS1-211ENST00000581761 EVI5LQ96CN4 794 aa17.78■□□□□ 0.44
MKS1-211ENST00000581761 KIF2CQ99661 725 aa17.78■□□□□ 0.44
MKS1-211ENST00000581761 ANP32EQ9BTT0 268 aa17.78■□□□□ 0.44
MKS1-211ENST00000581761 UTP14AQ9BVJ6 771 aaKnown RBP17.78■□□□□ 0.44
MKS1-211ENST00000581761 FHDC1Q9C0D6 1143 aaPredicted RBP17.78■□□□□ 0.44
MKS1-211ENST00000581761 GPR108Q9NPR9 543 aa17.78■□□□□ 0.44
MKS1-211ENST00000581761 DBNLQ9UJU6 430 aaKnown RBP17.78■□□□□ 0.44
MKS1-211ENST00000581761 FBXO3Q9UK99 471 aa17.78■□□□□ 0.44
MKS1-211ENST00000581761 BCORQ6W2J9 1755 aa17.77■□□□□ 0.44
MKS1-211ENST00000581761 DCAF8L1A6NGE4 600 aa17.77■□□□□ 0.44
MKS1-211ENST00000581761 FAM177BA6PVY3 158 aa17.77■□□□□ 0.44
MKS1-211ENST00000581761 SUSD4Q5VX71 490 aa17.77■□□□□ 0.44
MKS1-211ENST00000581761 TTLL11Q8NHH1 800 aa17.77■□□□□ 0.44
MKS1-211ENST00000581761 DBNDD2Q9BQY9 259 aa17.77■□□□□ 0.44
MKS1-211ENST00000581761 PUS3Q9BZE2 481 aaKnown RBP17.77■□□□□ 0.44
MKS1-211ENST00000581761 BOLA2Q9H3K6 86 aa17.77■□□□□ 0.44
MKS1-211ENST00000581761 UTRNP46939 3433 aa17.76■□□□□ 0.43
MKS1-211ENST00000581761 SH3TC1Q8TE82 1336 aa17.76■□□□□ 0.43
MKS1-211ENST00000581761 ANKRD18BA2A2Z9 1011 aa17.76■□□□□ 0.43
MKS1-211ENST00000581761 ADRA2BP18089 450 aa17.76■□□□□ 0.43
MKS1-211ENST00000581761 POLD1P28340 1107 aa17.76■□□□□ 0.43
MKS1-211ENST00000581761 SNX21Q969T3 373 aa17.76■□□□□ 0.43
MKS1-211ENST00000581761 ANO2Q9NQ90 1003 aa17.76■□□□□ 0.43
MKS1-211ENST00000581761 DIAPH3Q9NSV4 1193 aa17.76■□□□□ 0.43
MKS1-211ENST00000581761 CEP126Q9P2H0 1117 aa17.76■□□□□ 0.43
MKS1-211ENST00000581761 SRP68Q9UHB9 627 aaKnown RBP17.76■□□□□ 0.43
MKS1-211ENST00000581761 NIP7Q9Y221 180 aaKnown RBP eCLIP17.76■□□□□ 0.43
MKS1-211ENST00000581761 ZNF609O15014 1411 aa17.75■□□□□ 0.43
MKS1-211ENST00000581761 ATP5JP18859 108 aa17.75■□□□□ 0.43
MKS1-211ENST00000581761 ITGA6P23229 1130 aa17.75■□□□□ 0.43
MKS1-211ENST00000581761 MCCP23508 829 aa17.75■□□□□ 0.43
MKS1-211ENST00000581761 RABEP1Q15276 862 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms