RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 ALDH1L1O75891 902 aa16.08■□□□□ 0.16
SNORD55-201ENST00000581525 RARSP54136 660 aaKnown RBP16.08■□□□□ 0.16
SNORD55-201ENST00000581525 OLFM4Q6UX06 510 aa16.08■□□□□ 0.16
SNORD55-201ENST00000581525 RTFDC1Q9BY42 306 aaPredicted RBP16.08■□□□□ 0.16
SNORD55-201ENST00000581525 VPS33BQ9H267 617 aa16.08■□□□□ 0.16
SNORD55-201ENST00000581525 TAOK3Q9H2K8 898 aa16.08■□□□□ 0.16
SNORD55-201ENST00000581525 RNF181Q9P0P0 153 aa16.08■□□□□ 0.16
SNORD55-201ENST00000581525 PPEF1O14829 653 aaPredicted RBP16.07■□□□□ 0.16
SNORD55-201ENST00000581525 CSF1RP07333 972 aa16.07■□□□□ 0.16
SNORD55-201ENST00000581525 TTLL11Q8NHH1 800 aa16.07■□□□□ 0.16
SNORD55-201ENST00000581525 ZNF219Q9P2Y4 722 aaPredicted RBP16.07■□□□□ 0.16
SNORD55-201ENST00000581525 LAMB2P55268 1798 aa16.07■□□□□ 0.16
SNORD55-201ENST00000581525 RTL9Q8NET4 1388 aa16.06■□□□□ 0.16
SNORD55-201ENST00000581525 UTYO14607 1347 aa16.06■□□□□ 0.16
SNORD55-201ENST00000581525 RTL5Q5HYW3 569 aaPredicted RBP16.06■□□□□ 0.16
SNORD55-201ENST00000581525 CTSWP56202 376 aa16.05■□□□□ 0.16
SNORD55-201ENST00000581525 RPS8P62241 208 aaKnown RBP16.05■□□□□ 0.16
SNORD55-201ENST00000581525 CCDC152Q4G0S7 254 aa16.05■□□□□ 0.16
SNORD55-201ENST00000581525 ARHGAP45Q92619 1136 aa16.05■□□□□ 0.16
SNORD55-201ENST00000581525 JARID2Q92833 1246 aaPredicted RBP16.05■□□□□ 0.16
SNORD55-201ENST00000581525 CELF1Q92879 486 aaKnown RBP16.05■□□□□ 0.16
SNORD55-201ENST00000581525 UBE3BQ7Z3V4 1068 aa16.04■□□□□ 0.16
SNORD55-201ENST00000581525 SRCIN1Q9C0H9 1055 aa16.04■□□□□ 0.16
SNORD55-201ENST00000581525 GRM8O00222 908 aa16.03■□□□□ 0.16
SNORD55-201ENST00000581525 SEC31BQ9NQW1 1179 aa16.03■□□□□ 0.16
SNORD55-201ENST00000581525 SMC4Q9NTJ3 1288 aa16.03■□□□□ 0.16
SNORD55-201ENST00000581525 GLTPD2A6NH11 291 aa16.02■□□□□ 0.16
SNORD55-201ENST00000581525 FOXO4P98177 505 aa16.02■□□□□ 0.16
SNORD55-201ENST00000581525 SLC51AQ86UW1 340 aa16.02■□□□□ 0.16
SNORD55-201ENST00000581525 PODXL2Q9NZ53 605 aa16.02■□□□□ 0.16
SNORD55-201ENST00000581525 FZD9O00144 591 aa16.01■□□□□ 0.15
SNORD55-201ENST00000581525 IARSP41252 1262 aaKnown RBP16.01■□□□□ 0.15
SNORD55-201ENST00000581525 MPNDQ8N594 471 aa16.01■□□□□ 0.15
SNORD55-201ENST00000581525 BCL2L13Q9BXK5 485 aa16.01■□□□□ 0.15
SNORD55-201ENST00000581525 GPBP1L1Q9HC44 474 aaPredicted RBP16.01■□□□□ 0.15
SNORD55-201ENST00000581525 ZNF277Q9NRM2 450 aaPredicted RBP16.01■□□□□ 0.15
SNORD55-201ENST00000581525 NOB1Q9ULX3 412 aaKnown RBP16.01■□□□□ 0.15
SNORD55-201ENST00000581525 DICER1Q9UPY3 1922 aaKnown RBP16.01■□□□□ 0.15
SNORD55-201ENST00000581525 CACNA1SQ13698 1873 aa16.01■□□□□ 0.15
SNORD55-201ENST00000581525 COL4A1P02462 1669 aa16■□□□□ 0.15
SNORD55-201ENST00000581525 SUPT20HQ8NEM7 779 aa16■□□□□ 0.15
SNORD55-201ENST00000581525 TMX4Q9H1E5 349 aaPredicted RBP16■□□□□ 0.15
SNORD55-201ENST00000581525 GREM2Q9H772 168 aa16■□□□□ 0.15
SNORD55-201ENST00000581525 BSDC1Q9NW68 430 aaPredicted RBP16■□□□□ 0.15
SNORD55-201ENST00000581525 LRRC37AA6NMS7 1700 aa15.99■□□□□ 0.15
SNORD55-201ENST00000581525 KIF3CO14782 793 aa15.99■□□□□ 0.15
SNORD55-201ENST00000581525 SLC4A10Q6U841 1118 aa15.99■□□□□ 0.15
SNORD55-201ENST00000581525 KAZALD1Q96I82 304 aa15.99■□□□□ 0.15
SNORD55-201ENST00000581525 CDC5LQ99459 802 aaKnown RBP15.99■□□□□ 0.15
SNORD55-201ENST00000581525 API5Q9BZZ5 524 aaKnown RBP15.99■□□□□ 0.15
SNORD55-201ENST00000581525 USP44Q9H0E7 712 aa15.99■□□□□ 0.15
SNORD55-201ENST00000581525 KDM2BQ8NHM5 1336 aa15.98■□□□□ 0.15
SNORD55-201ENST00000581525 KIF16BQ96L93 1317 aa15.98■□□□□ 0.15
SNORD55-201ENST00000581525 CCDC88AQ3V6T2 1871 aa15.98■□□□□ 0.15
SNORD55-201ENST00000581525 EPHA10Q5JZY3 1008 aa15.98■□□□□ 0.15
SNORD55-201ENST00000581525 DPY19L2Q6NUT2 758 aa15.98■□□□□ 0.15
SNORD55-201ENST00000581525 DPP8Q6V1X1 898 aaPredicted RBP15.98■□□□□ 0.15
SNORD55-201ENST00000581525 C9orf78Q9NZ63 289 aaPredicted RBP15.98■□□□□ 0.15
SNORD55-201ENST00000581525 TAF1P21675 1872 aa15.97■□□□□ 0.15
SNORD55-201ENST00000581525 POTECB2RU33 542 aa15.97■□□□□ 0.15
SNORD55-201ENST00000581525 NBPF7P0C2Y1 421 aaPredicted RBP15.97■□□□□ 0.15
SNORD55-201ENST00000581525 CCT4P50991 539 aaKnown RBP15.97■□□□□ 0.15
SNORD55-201ENST00000581525 KIAA2012Q0VF49 1180 aa15.97■□□□□ 0.15
SNORD55-201ENST00000581525 RABL6Q3YEC7 729 aaPredicted RBP15.97■□□□□ 0.15
SNORD55-201ENST00000581525 INTS3Q68E01 1043 aaKnown RBP15.97■□□□□ 0.15
SNORD55-201ENST00000581525 ANKRD18AQ8IVF6 992 aa15.97■□□□□ 0.15
SNORD55-201ENST00000581525 POLLQ9UGP5 575 aa15.97■□□□□ 0.15
SNORD55-201ENST00000581525 BCAR3O75815 825 aa15.96■□□□□ 0.15
SNORD55-201ENST00000581525 ITGA6P23229 1130 aa15.96■□□□□ 0.15
SNORD55-201ENST00000581525 GPSM2P81274 684 aa15.96■□□□□ 0.15
SNORD55-201ENST00000581525 L3MBTL3Q96JM7 780 aaPredicted RBP15.96■□□□□ 0.15
SNORD55-201ENST00000581525 DUOX1Q9NRD9 1551 aa15.96■□□□□ 0.14
SNORD55-201ENST00000581525 COL4A5P29400 1685 aa15.95■□□□□ 0.14
SNORD55-201ENST00000581525 LTBP1Q14766 1721 aa15.95■□□□□ 0.14
SNORD55-201ENST00000581525 IPO8O15397 1037 aaKnown RBP15.95■□□□□ 0.14
SNORD55-201ENST00000581525 LMBR1LQ6UX01 489 aa15.95■□□□□ 0.14
SNORD55-201ENST00000581525 TBC1D16Q8TBP0 767 aa15.95■□□□□ 0.14
SNORD55-201ENST00000581525 JDP2Q8WYK2 163 aa15.95■□□□□ 0.14
SNORD55-201ENST00000581525 SUCLG2Q96I99 432 aa15.95■□□□□ 0.14
SNORD55-201ENST00000581525 NMRK2Q9NPI5 230 aa15.95■□□□□ 0.14
SNORD55-201ENST00000581525 MINPP1Q9UNW1 487 aa15.95■□□□□ 0.14
SNORD55-201ENST00000581525 MYH3P11055 1940 aa15.95■□□□□ 0.14
SNORD55-201ENST00000581525 ATF7IPQ6VMQ6 1270 aa15.94■□□□□ 0.14
SNORD55-201ENST00000581525 CCDC85AQ96PX6 553 aaPredicted RBP15.94■□□□□ 0.14
SNORD55-201ENST00000581525 NSFL1CQ9UNZ2 370 aaKnown RBP15.94■□□□□ 0.14
SNORD55-201ENST00000581525 WDR90Q96KV7 1748 aa15.94■□□□□ 0.14
SNORD55-201ENST00000581525 ANKRD18BA2A2Z9 1011 aa15.93■□□□□ 0.14
SNORD55-201ENST00000581525 PPIP5K2O43314 1243 aa15.93■□□□□ 0.14
SNORD55-201ENST00000581525 DDNO94850 711 aaPredicted RBP15.93■□□□□ 0.14
SNORD55-201ENST00000581525 TRIM27P14373 513 aa15.93■□□□□ 0.14
SNORD55-201ENST00000581525 VEGFAP15692 232 aaPredicted RBP15.93■□□□□ 0.14
SNORD55-201ENST00000581525 AOC3Q16853 763 aa15.93■□□□□ 0.14
SNORD55-201ENST00000581525 FAM161AQ3B820 660 aa15.93■□□□□ 0.14
SNORD55-201ENST00000581525 LARGE2Q8N3Y3 721 aa15.93■□□□□ 0.14
SNORD55-201ENST00000581525 ZNF526Q8TF50 670 aaPredicted RBP15.93■□□□□ 0.14
SNORD55-201ENST00000581525 RRAGCQ9HB90 399 aa15.93■□□□□ 0.14
SNORD55-201ENST00000581525 TIAM2Q8IVF5 1701 aa15.93■□□□□ 0.14
SNORD55-201ENST00000581525 XDHP47989 1333 aa15.93■□□□□ 0.14
SNORD55-201ENST00000581525 ATP2B4P23634 1241 aa15.92■□□□□ 0.14
SNORD55-201ENST00000581525 IGHMBP2P38935 993 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms