RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 C11orf91Q3C1V1 193 aa8.61□□□□□ -1.03
SMCHD1-205ENST00000581383 FAM35AQ86V20 835 aa8.61□□□□□ -1.03
SMCHD1-205ENST00000581383 GSX2Q9BZM3 304 aa8.61□□□□□ -1.03
SMCHD1-205ENST00000581383 SEMA6BQ9H3T3 888 aa8.61□□□□□ -1.03
SMCHD1-205ENST00000581383 CARNS1A5YM72 827 aa8.6□□□□□ -1.03
SMCHD1-205ENST00000581383 MICAL2O94851 1124 aa8.6□□□□□ -1.03
SMCHD1-205ENST00000581383 RARAP10276 462 aa8.6□□□□□ -1.03
SMCHD1-205ENST00000581383 CPB1P15086 417 aa8.6□□□□□ -1.03
SMCHD1-205ENST00000581383 GRIK4Q16099 956 aa8.6□□□□□ -1.03
SMCHD1-205ENST00000581383 CMTR1Q8N1G2 835 aaKnown RBP8.6□□□□□ -1.03
SMCHD1-205ENST00000581383 TRAIPQ9BWF2 469 aa8.6□□□□□ -1.03
SMCHD1-205ENST00000581383 PRDM6Q9NQX0 595 aa8.6□□□□□ -1.03
SMCHD1-205ENST00000581383 TRIM26Q12899 539 aaPredicted RBP8.59□□□□□ -1.03
SMCHD1-205ENST00000581383 ELMSAN1Q6PJG2 1045 aa8.59□□□□□ -1.03
SMCHD1-205ENST00000581383 IFT43Q96FT9 208 aa8.59□□□□□ -1.03
SMCHD1-205ENST00000581383 PRIMPOLQ96LW4 560 aa8.59□□□□□ -1.03
SMCHD1-205ENST00000581383 PRMT3O60678 531 aa8.58□□□□□ -1.04
SMCHD1-205ENST00000581383 SASH3O75995 380 aa8.58□□□□□ -1.04
SMCHD1-205ENST00000581383 WEE1P30291 646 aa8.58□□□□□ -1.04
SMCHD1-205ENST00000581383 PDE4CQ08493 712 aa8.58□□□□□ -1.04
SMCHD1-205ENST00000581383 USP21Q9UK80 565 aa8.58□□□□□ -1.04
SMCHD1-205ENST00000581383 BCS1LQ9Y276 419 aa8.58□□□□□ -1.04
SMCHD1-205ENST00000581383 C9orf172C9J069 976 aa8.57□□□□□ -1.04
SMCHD1-205ENST00000581383 NID1P14543 1247 aa8.57□□□□□ -1.04
SMCHD1-205ENST00000581383 TARSP26639 723 aaKnown RBP8.57□□□□□ -1.04
SMCHD1-205ENST00000581383 MLLT1Q03111 559 aaPredicted RBP8.57□□□□□ -1.04
SMCHD1-205ENST00000581383 DMRTC2Q8IXT2 367 aaPredicted RBP8.57□□□□□ -1.04
SMCHD1-205ENST00000581383 RGL4Q8IZJ4 473 aa8.57□□□□□ -1.04
SMCHD1-205ENST00000581383 MDFIQ99750 246 aa8.57□□□□□ -1.04
SMCHD1-205ENST00000581383 QTRT2Q9H974 415 aaKnown RBP8.57□□□□□ -1.04
SMCHD1-205ENST00000581383 INPP5BP32019 993 aa8.56□□□□□ -1.04
SMCHD1-205ENST00000581383 ELOAQ14241 798 aaKnown RBP8.56□□□□□ -1.04
SMCHD1-205ENST00000581383 DHX32Q7L7V1 743 aaKnown RBP8.56□□□□□ -1.04
SMCHD1-205ENST00000581383 STK32AQ8WU08 396 aa8.56□□□□□ -1.04
SMCHD1-205ENST00000581383 ZMIZ1Q9ULJ6 1067 aa8.56□□□□□ -1.04
SMCHD1-205ENST00000581383 USTQ9Y2C2 406 aa8.56□□□□□ -1.04
SMCHD1-205ENST00000581383 A0A0A0MRY4 1105 aa8.55□□□□□ -1.04
SMCHD1-205ENST00000581383 C20orf204Q6ZNR8 217 aa8.55□□□□□ -1.04
SMCHD1-205ENST00000581383 TREML1Q86YW5 311 aa8.55□□□□□ -1.04
SMCHD1-205ENST00000581383 AEBP1Q8IUX7 1158 aa8.55□□□□□ -1.04
SMCHD1-205ENST00000581383 RBSNQ9H1K0 784 aa8.55□□□□□ -1.04
SMCHD1-205ENST00000581383 USP20Q9Y2K6 914 aa8.55□□□□□ -1.04
SMCHD1-205ENST00000581383 RTCBQ9Y3I0 505 aaKnown RBP8.55□□□□□ -1.04
SMCHD1-205ENST00000581383 TMEM88BA6NKF7 163 aa8.54□□□□□ -1.04
SMCHD1-205ENST00000581383 XYLBO75191 536 aa8.54□□□□□ -1.04
SMCHD1-205ENST00000581383 ELNP15502 786 aa8.54□□□□□ -1.04
SMCHD1-205ENST00000581383 EIF2AK2P19525 551 aaKnown RBP8.54□□□□□ -1.04
SMCHD1-205ENST00000581383 NRG1Q02297 640 aaPredicted RBP8.54□□□□□ -1.04
SMCHD1-205ENST00000581383 SWI5Q1ZZU3 235 aa8.54□□□□□ -1.04
SMCHD1-205ENST00000581383 TMEM164Q5U3C3 297 aa8.54□□□□□ -1.04
SMCHD1-205ENST00000581383 HFE2Q6ZVN8 426 aa8.54□□□□□ -1.04
SMCHD1-205ENST00000581383 MKNK1Q9BUB5 465 aa8.54□□□□□ -1.04
SMCHD1-205ENST00000581383 DMGDHQ9UI17 866 aaKnown RBP8.54□□□□□ -1.04
SMCHD1-205ENST00000581383 GHRHP01286 108 aa8.53□□□□□ -1.04
SMCHD1-205ENST00000581383 PSAPP07602 524 aa8.53□□□□□ -1.04
SMCHD1-205ENST00000581383 AFF1P51825 1210 aaKnown RBP8.53□□□□□ -1.04
SMCHD1-205ENST00000581383 WFDC8Q8IUA0 241 aa8.53□□□□□ -1.04
SMCHD1-205ENST00000581383 MYO19Q96H55 970 aa8.53□□□□□ -1.04
SMCHD1-205ENST00000581383 ZBTB7CA1YPR0 619 aa8.52□□□□□ -1.05
SMCHD1-205ENST00000581383 MAP3K6O95382 1288 aa8.52□□□□□ -1.05
SMCHD1-205ENST00000581383 BRD2P25440 801 aaKnown RBP8.52□□□□□ -1.05
SMCHD1-205ENST00000581383 FKBP5Q13451 457 aaPredicted RBP8.52□□□□□ -1.05
SMCHD1-205ENST00000581383 SCO2A0A1W2PP80 73 aa8.51□□□□□ -1.05
SMCHD1-205ENST00000581383 COL9A3Q14050 684 aaPredicted RBP8.51□□□□□ -1.05
SMCHD1-205ENST00000581383 ZMYM1Q5SVZ6 1142 aa8.51□□□□□ -1.05
SMCHD1-205ENST00000581383 C16orf46Q6P387 395 aa8.51□□□□□ -1.05
SMCHD1-205ENST00000581383 SMG9Q9H0W8 520 aaKnown RBP8.51□□□□□ -1.05
SMCHD1-205ENST00000581383 TPSG1Q9NRR2 321 aa8.51□□□□□ -1.05
SMCHD1-205ENST00000581383 FAM13BQ9NYF5 915 aa8.51□□□□□ -1.05
SMCHD1-205ENST00000581383 ZFATQ9P243 1243 aa8.51□□□□□ -1.05
SMCHD1-205ENST00000581383 NAGPAQ9UK23 515 aa8.51□□□□□ -1.05
SMCHD1-205ENST00000581383 LRFN2Q9ULH4 789 aa8.51□□□□□ -1.05
SMCHD1-205ENST00000581383 ITGB7P26010 798 aa8.5□□□□□ -1.05
SMCHD1-205ENST00000581383 PLAURQ03405 335 aa8.5□□□□□ -1.05
SMCHD1-205ENST00000581383 NAA30Q147X3 362 aaPredicted RBP8.5□□□□□ -1.05
SMCHD1-205ENST00000581383 COX20Q5RI15 118 aa8.5□□□□□ -1.05
SMCHD1-205ENST00000581383 PERM1Q5SV97 790 aa8.5□□□□□ -1.05
SMCHD1-205ENST00000581383 MSL1Q68DK7 614 aa8.5□□□□□ -1.05
SMCHD1-205ENST00000581383 C11orf16Q9NQ32 467 aa8.5□□□□□ -1.05
SMCHD1-205ENST00000581383 GPLD1P80108 840 aa8.49□□□□□ -1.05
SMCHD1-205ENST00000581383 SHISA2Q6UWI4 295 aa8.49□□□□□ -1.05
SMCHD1-205ENST00000581383 TRPM4Q8TD43 1214 aa8.49□□□□□ -1.05
SMCHD1-205ENST00000581383 PIK3R5Q8WYR1 880 aa8.49□□□□□ -1.05
SMCHD1-205ENST00000581383 FRRS1LQ9P0K9 344 aa8.49□□□□□ -1.05
SMCHD1-205ENST00000581383 OPLAHO14841 1288 aa8.48□□□□□ -1.05
SMCHD1-205ENST00000581383 GDF6Q6KF10 455 aaPredicted RBP8.48□□□□□ -1.05
SMCHD1-205ENST00000581383 TXNRD3Q86VQ6 643 aa8.48□□□□□ -1.05
SMCHD1-205ENST00000581383 KRTAP19-1Q8IUB9 90 aa8.48□□□□□ -1.05
SMCHD1-205ENST00000581383 FMR1NBQ8N0W7 255 aaPredicted RBP8.48□□□□□ -1.05
SMCHD1-205ENST00000581383 NSUN5Q96P11 429 aaKnown RBP8.48□□□□□ -1.05
SMCHD1-205ENST00000581383 LPIN3Q9BQK8 851 aa8.48□□□□□ -1.05
SMCHD1-205ENST00000581383 TLR7Q9NYK1 1049 aaKnown RBP8.48□□□□□ -1.05
SMCHD1-205ENST00000581383 PTCD1O75127 700 aaKnown RBP8.47□□□□□ -1.05
SMCHD1-205ENST00000581383 BRD1O95696 1058 aa8.47□□□□□ -1.05
SMCHD1-205ENST00000581383 NRLP54845 237 aa8.47□□□□□ -1.05
SMCHD1-205ENST00000581383 FAM69CQ0P6D2 419 aa8.47□□□□□ -1.05
SMCHD1-205ENST00000581383 TP53INP1Q96A56 240 aa8.47□□□□□ -1.05
SMCHD1-205ENST00000581383 LENG1Q96BZ8 264 aaPredicted RBP8.47□□□□□ -1.05
SMCHD1-205ENST00000581383 SPACA7Q96KW9 195 aa8.47□□□□□ -1.05
SMCHD1-205ENST00000581383 PODXL2Q9NZ53 605 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms