RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 PLEKHF1Q96S99 279 aa10.99□□□□□ -0.65
SUPT4H1-206ENST00000581204 PNMA3Q9UL41 463 aa10.99□□□□□ -0.65
SUPT4H1-206ENST00000581204 LOC102724428A0A0B4J2F2 783 aa10.98□□□□□ -0.65
SUPT4H1-206ENST00000581204 GYS1P13807 737 aa10.98□□□□□ -0.65
SUPT4H1-206ENST00000581204 SIK1P57059 783 aa10.98□□□□□ -0.65
SUPT4H1-206ENST00000581204 SMARCC1Q92922 1105 aaPredicted RBP10.98□□□□□ -0.65
SUPT4H1-206ENST00000581204 TATDN2Q93075 761 aa10.98□□□□□ -0.65
SUPT4H1-206ENST00000581204 FAM198AQ9UFP1 575 aa10.98□□□□□ -0.65
SUPT4H1-206ENST00000581204 TMPOP42166 694 aaKnown RBP10.97□□□□□ -0.65
SUPT4H1-206ENST00000581204 AEBP1Q8IUX7 1158 aa10.97□□□□□ -0.65
SUPT4H1-206ENST00000581204 PIGBQ92521 554 aa10.97□□□□□ -0.65
SUPT4H1-206ENST00000581204 KCNK17Q96T54 332 aa10.97□□□□□ -0.65
SUPT4H1-206ENST00000581204 KDRP35968 1356 aa10.97□□□□□ -0.65
SUPT4H1-206ENST00000581204 COL5A3P25940 1745 aaPredicted RBP10.97□□□□□ -0.65
SUPT4H1-206ENST00000581204 PCDH11XQ9BZA7 1347 aa10.96□□□□□ -0.65
SUPT4H1-206ENST00000581204 PCDH11YQ9BZA8 1340 aa10.96□□□□□ -0.65
SUPT4H1-206ENST00000581204 CYP27B1O15528 508 aa10.96□□□□□ -0.65
SUPT4H1-206ENST00000581204 LMNB1P20700 586 aa10.96□□□□□ -0.65
SUPT4H1-206ENST00000581204 CHRNA5P30532 468 aa10.96□□□□□ -0.65
SUPT4H1-206ENST00000581204 RIPK4P57078 832 aa10.96□□□□□ -0.65
SUPT4H1-206ENST00000581204 MYSM1Q5VVJ2 828 aa10.96□□□□□ -0.65
SUPT4H1-206ENST00000581204 NBPF6Q5VWK0 638 aa10.96□□□□□ -0.65
SUPT4H1-206ENST00000581204 NLGN1Q8N2Q7 840 aa10.96□□□□□ -0.65
SUPT4H1-206ENST00000581204 NBPF4Q96M43 638 aa10.96□□□□□ -0.65
SUPT4H1-206ENST00000581204 TMEM134Q9H6X4 195 aa10.96□□□□□ -0.65
SUPT4H1-206ENST00000581204 DLEC1Q9Y238 1755 aa10.95□□□□□ -0.66
SUPT4H1-206ENST00000581204 CLK2P49760 499 aaKnown RBP10.95□□□□□ -0.66
SUPT4H1-206ENST00000581204 CCDC27Q2M243 656 aa10.95□□□□□ -0.66
SUPT4H1-206ENST00000581204 WWC1Q8IX03 1113 aa10.95□□□□□ -0.66
SUPT4H1-206ENST00000581204 PHACTR3Q96KR7 559 aa10.95□□□□□ -0.66
SUPT4H1-206ENST00000581204 TBC1D2Q9BYX2 928 aa10.95□□□□□ -0.66
SUPT4H1-206ENST00000581204 LTBP1Q14766 1721 aa10.95□□□□□ -0.66
SUPT4H1-206ENST00000581204 ZNF831Q5JPB2 1677 aa10.95□□□□□ -0.66
SUPT4H1-206ENST00000581204 CCDC88AQ3V6T2 1871 aa10.94□□□□□ -0.66
SUPT4H1-206ENST00000581204 ZNF521Q96K83 1311 aa10.94□□□□□ -0.66
SUPT4H1-206ENST00000581204 CD46P15529 392 aa10.94□□□□□ -0.66
SUPT4H1-206ENST00000581204 DDR1Q08345 913 aa10.94□□□□□ -0.66
SUPT4H1-206ENST00000581204 NFE2L2Q16236 605 aa10.94□□□□□ -0.66
SUPT4H1-206ENST00000581204 USHBP1Q8N6Y0 703 aa10.94□□□□□ -0.66
SUPT4H1-206ENST00000581204 ADAMTSL1Q8N6G6 1762 aa10.93□□□□□ -0.66
SUPT4H1-206ENST00000581204 PBX2P40425 430 aa10.93□□□□□ -0.66
SUPT4H1-206ENST00000581204 SLC4A3P48751 1232 aa10.93□□□□□ -0.66
SUPT4H1-206ENST00000581204 LMOD3Q0VAK6 560 aa10.93□□□□□ -0.66
SUPT4H1-206ENST00000581204 WDR63Q8IWG1 891 aa10.93□□□□□ -0.66
SUPT4H1-206ENST00000581204 OTUD5Q96G74 571 aa10.93□□□□□ -0.66
SUPT4H1-206ENST00000581204 SLC4A5Q9BY07 1137 aa10.93□□□□□ -0.66
SUPT4H1-206ENST00000581204 POLR3EQ9NVU0 708 aa10.93□□□□□ -0.66
SUPT4H1-206ENST00000581204 PARP3Q9Y6F1 533 aa10.93□□□□□ -0.66
SUPT4H1-206ENST00000581204 ADAMTS7Q9UKP4 1686 aa10.92□□□□□ -0.66
SUPT4H1-206ENST00000581204 RASSF10A6NK89 507 aa10.92□□□□□ -0.66
SUPT4H1-206ENST00000581204 E9PSI1 815 aa10.92□□□□□ -0.66
SUPT4H1-206ENST00000581204 NFKBIEO00221 500 aa10.92□□□□□ -0.66
SUPT4H1-206ENST00000581204 GJA5P36382 358 aa10.92□□□□□ -0.66
SUPT4H1-206ENST00000581204 SLFN5Q08AF3 891 aa10.92□□□□□ -0.66
SUPT4H1-206ENST00000581204 TUSC1Q2TAM9 212 aa10.92□□□□□ -0.66
SUPT4H1-206ENST00000581204 TRAPPC3LQ5T215 181 aa10.92□□□□□ -0.66
SUPT4H1-206ENST00000581204 NUTM1Q86Y26 1132 aa10.92□□□□□ -0.66
SUPT4H1-206ENST00000581204 SLC4A9Q96Q91 983 aa10.92□□□□□ -0.66
SUPT4H1-206ENST00000581204 ZBED2Q9BTP6 218 aa10.92□□□□□ -0.66
SUPT4H1-206ENST00000581204 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.92□□□□□ -0.66
SUPT4H1-206ENST00000581204 ASAP1Q9ULH1 1129 aa10.92□□□□□ -0.66
SUPT4H1-206ENST00000581204 DLG5Q8TDM6 1919 aa10.92□□□□□ -0.66
SUPT4H1-206ENST00000581204 TMEM88BA6NKF7 163 aa10.91□□□□□ -0.66
SUPT4H1-206ENST00000581204 DDX11L8A8MPP1 907 aa10.91□□□□□ -0.66
SUPT4H1-206ENST00000581204 ARHGAP33O14559 1287 aa10.91□□□□□ -0.66
SUPT4H1-206ENST00000581204 ITGBL1O95965 494 aaPredicted RBP10.91□□□□□ -0.66
SUPT4H1-206ENST00000581204 NEFLP07196 543 aa10.91□□□□□ -0.66
SUPT4H1-206ENST00000581204 ATP6V1AP38606 617 aa10.91□□□□□ -0.66
SUPT4H1-206ENST00000581204 CALD1Q05682 793 aaKnown RBP10.91□□□□□ -0.66
SUPT4H1-206ENST00000581204 GAS2L2Q8NHY3 880 aa10.91□□□□□ -0.66
SUPT4H1-206ENST00000581204 RTCBQ9Y3I0 505 aaKnown RBP10.91□□□□□ -0.66
SUPT4H1-206ENST00000581204 DICER1Q9UPY3 1922 aaKnown RBP10.91□□□□□ -0.66
SUPT4H1-206ENST00000581204 PDE4DIPQ5VU43 2346 aa10.91□□□□□ -0.66
SUPT4H1-206ENST00000581204 MYH14Q7Z406 1995 aaKnown RBP10.9□□□□□ -0.66
SUPT4H1-206ENST00000581204 NRXN2Q9P2S2 1712 aa10.9□□□□□ -0.66
SUPT4H1-206ENST00000581204 PROX2Q3B8N5 592 aa10.9□□□□□ -0.66
SUPT4H1-206ENST00000581204 RAPGEF4Q8WZA2 1011 aa10.9□□□□□ -0.66
SUPT4H1-206ENST00000581204 MYH16Q9H6N6 1097 aa10.9□□□□□ -0.66
SUPT4H1-206ENST00000581204 RABGEF1Q9UJ41 708 aa10.9□□□□□ -0.66
SUPT4H1-206ENST00000581204 SUPT16HQ9Y5B9 1047 aaKnown RBP10.9□□□□□ -0.66
SUPT4H1-206ENST00000581204 WDR33Q9C0J8 1336 aaKnown RBP10.89□□□□□ -0.67
SUPT4H1-206ENST00000581204 TATP17735 454 aaPredicted RBP10.89□□□□□ -0.67
SUPT4H1-206ENST00000581204 MAP2K1Q02750 393 aaPredicted RBP10.89□□□□□ -0.67
SUPT4H1-206ENST00000581204 MTHFSDQ2M296 383 aaKnown RBP10.89□□□□□ -0.67
SUPT4H1-206ENST00000581204 PRPF38BQ5VTL8 546 aaKnown RBP10.89□□□□□ -0.67
SUPT4H1-206ENST00000581204 DUSP27Q5VZP5 1158 aa10.89□□□□□ -0.67
SUPT4H1-206ENST00000581204 RTF1Q92541 710 aaKnown RBP10.89□□□□□ -0.67
SUPT4H1-206ENST00000581204 MCOLN1Q9GZU1 580 aa10.89□□□□□ -0.67
SUPT4H1-206ENST00000581204 ATG3Q9NT62 314 aa10.89□□□□□ -0.67
SUPT4H1-206ENST00000581204 KIAA1468Q9P260 1216 aa10.89□□□□□ -0.67
SUPT4H1-206ENST00000581204 NCAPD2Q15021 1401 aa10.89□□□□□ -0.67
SUPT4H1-206ENST00000581204 CNTNAP4Q9C0A0 1308 aa10.88□□□□□ -0.67
SUPT4H1-206ENST00000581204 POLRMTO00411 1230 aaKnown RBP10.88□□□□□ -0.67
SUPT4H1-206ENST00000581204 USP46P62068 366 aa10.88□□□□□ -0.67
SUPT4H1-206ENST00000581204 MCM6Q14566 821 aa10.88□□□□□ -0.67
SUPT4H1-206ENST00000581204 PLEKHO1Q53GL0 409 aaPredicted RBP10.88□□□□□ -0.67
SUPT4H1-206ENST00000581204 RC3H1Q5TC82 1133 aaKnown RBP10.88□□□□□ -0.67
SUPT4H1-206ENST00000581204 RIC3Q7Z5B4 369 aa10.88□□□□□ -0.67
SUPT4H1-206ENST00000581204 PROCA1Q8NCQ7 364 aaPredicted RBP10.88□□□□□ -0.67
SUPT4H1-206ENST00000581204 SPIRE2Q8WWL2 714 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms