RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-218ENST00000580745 GRIPAP1Q4V328 841 aa14.4□□□□□ -0.1
PPP4R1-218ENST00000580745 RTFDC1Q9BY42 306 aaPredicted RBP14.4□□□□□ -0.1
PPP4R1-218ENST00000580745 CREBZFQ9NS37 354 aa14.4□□□□□ -0.1
PPP4R1-218ENST00000580745 GOLGA2Q08379 1002 aa14.39□□□□□ -0.11
PPP4R1-218ENST00000580745 TRIM28Q13263 835 aaKnown RBP14.39□□□□□ -0.11
PPP4R1-218ENST00000580745 SF3B3Q15393 1217 aaKnown RBP14.39□□□□□ -0.11
PPP4R1-218ENST00000580745 COL13A1Q5TAT6 717 aaPredicted RBP14.39□□□□□ -0.11
PPP4R1-218ENST00000580745 CNTROBQ8N137 903 aa14.39□□□□□ -0.11
PPP4R1-218ENST00000580745 GPR101Q96P66 508 aaPredicted RBP14.39□□□□□ -0.11
PPP4R1-218ENST00000580745 SALL2Q9Y467 1007 aaPredicted RBP14.39□□□□□ -0.11
PPP4R1-218ENST00000580745 RAD17O75943 681 aa14.38□□□□□ -0.11
PPP4R1-218ENST00000580745 HSPA1AP0DMV8 641 aaKnown RBP14.38□□□□□ -0.11
PPP4R1-218ENST00000580745 HSPA1BP0DMV9 641 aaKnown RBP14.38□□□□□ -0.11
PPP4R1-218ENST00000580745 LMOD1P29536 600 aaPredicted RBP14.38□□□□□ -0.11
PPP4R1-218ENST00000580745 KIAA2012Q0VF49 1180 aa14.38□□□□□ -0.11
PPP4R1-218ENST00000580745 PNMA8AQ86V59 439 aaPredicted RBP14.38□□□□□ -0.11
PPP4R1-218ENST00000580745 WWC1Q8IX03 1113 aa14.38□□□□□ -0.11
PPP4R1-218ENST00000580745 CCDC85AQ96PX6 553 aaPredicted RBP14.38□□□□□ -0.11
PPP4R1-218ENST00000580745 MRS2Q9HD23 443 aa14.38□□□□□ -0.11
PPP4R1-218ENST00000580745 SEC31BQ9NQW1 1179 aa14.38□□□□□ -0.11
PPP4R1-218ENST00000580745 ZNRF3Q9ULT6 936 aa14.38□□□□□ -0.11
PPP4R1-218ENST00000580745 COL4A1P02462 1669 aa14.38□□□□□ -0.11
PPP4R1-218ENST00000580745 DICER1Q9UPY3 1922 aaKnown RBP14.37□□□□□ -0.11
PPP4R1-218ENST00000580745 SHTN1A0MZ66 631 aa14.37□□□□□ -0.11
PPP4R1-218ENST00000580745 YDJCA8MPS7 323 aa14.37□□□□□ -0.11
PPP4R1-218ENST00000580745 GMPSP49915 693 aaPredicted RBP14.37□□□□□ -0.11
PPP4R1-218ENST00000580745 GPSM2P81274 684 aa14.37□□□□□ -0.11
PPP4R1-218ENST00000580745 G2E3Q7L622 706 aa14.37□□□□□ -0.11
PPP4R1-218ENST00000580745 SUPT20HQ8NEM7 779 aa14.37□□□□□ -0.11
PPP4R1-218ENST00000580745 NSFL1CQ9UNZ2 370 aaKnown RBP14.37□□□□□ -0.11
PPP4R1-218ENST00000580745 ZNF316A6NFI3 1004 aaPredicted RBP14.36□□□□□ -0.11
PPP4R1-218ENST00000580745 TMEM88BA6NKF7 163 aa14.36□□□□□ -0.11
PPP4R1-218ENST00000580745 RIMBP2O15034 1052 aa14.36□□□□□ -0.11
PPP4R1-218ENST00000580745 CCDC30Q5VVM6 783 aa14.36□□□□□ -0.11
PPP4R1-218ENST00000580745 ZBTB38Q8NAP3 1195 aaPredicted RBP14.36□□□□□ -0.11
PPP4R1-218ENST00000580745 METTL22Q9BUU2 404 aaPredicted RBP14.36□□□□□ -0.11
PPP4R1-218ENST00000580745 POLLQ9UGP5 575 aa14.36□□□□□ -0.11
PPP4R1-218ENST00000580745 MAP3K2Q9Y2U5 619 aa14.36□□□□□ -0.11
PPP4R1-218ENST00000580745 LTBP1Q14766 1721 aa14.35□□□□□ -0.11
PPP4R1-218ENST00000580745 TRAF5O00463 557 aa14.35□□□□□ -0.11
PPP4R1-218ENST00000580745 ZEB1P37275 1124 aaPredicted RBP14.35□□□□□ -0.11
PPP4R1-218ENST00000580745 CIAPIN1Q6FI81 312 aa14.35□□□□□ -0.11
PPP4R1-218ENST00000580745 VPS33BQ9H267 617 aa14.35□□□□□ -0.11
PPP4R1-218ENST00000580745 DBNDD1Q9H9R9 158 aa14.35□□□□□ -0.11
PPP4R1-218ENST00000580745 GPRC5DQ9NZD1 345 aa14.35□□□□□ -0.11
PPP4R1-218ENST00000580745 CNTNAP1P78357 1384 aa14.34□□□□□ -0.11
PPP4R1-218ENST00000580745 PI4KAP2A4QPH2 592 aa14.34□□□□□ -0.11
PPP4R1-218ENST00000580745 C6orf229H3BNL8 230 aa14.34□□□□□ -0.11
PPP4R1-218ENST00000580745 ANP32CO43423 234 aa14.34□□□□□ -0.11
PPP4R1-218ENST00000580745 IGKV5-2P06315 115 aa14.34□□□□□ -0.11
PPP4R1-218ENST00000580745 VEGFBP49765 207 aa14.34□□□□□ -0.11
PPP4R1-218ENST00000580745 RPS8P62241 208 aaKnown RBP14.34□□□□□ -0.11
PPP4R1-218ENST00000580745 DOK7Q18PE1 504 aa14.34□□□□□ -0.11
PPP4R1-218ENST00000580745 CCDC27Q2M243 656 aa14.34□□□□□ -0.11
PPP4R1-218ENST00000580745 TWISTNBQ3B726 338 aaPredicted RBP14.34□□□□□ -0.11
PPP4R1-218ENST00000580745 PI4KAP1Q8N8J0 262 aa14.34□□□□□ -0.11
PPP4R1-218ENST00000580745 CCDC191Q8NCU4 936 aa14.34□□□□□ -0.11
PPP4R1-218ENST00000580745 KCNQ5Q9NR82 932 aa14.34□□□□□ -0.11
PPP4R1-218ENST00000580745 CWC25Q9NXE8 425 aaPredicted RBP14.34□□□□□ -0.11
PPP4R1-218ENST00000580745 ZBTB12Q9Y330 459 aaPredicted RBP14.34□□□□□ -0.11
PPP4R1-218ENST00000580745 PCCAP05165 728 aaPredicted RBP14.33□□□□□ -0.12
PPP4R1-218ENST00000580745 HIRAP54198 1017 aaPredicted RBP14.33□□□□□ -0.12
PPP4R1-218ENST00000580745 WASHC4Q2M389 1173 aa14.33□□□□□ -0.12
PPP4R1-218ENST00000580745 CWF19L2Q2TBE0 894 aaKnown RBP14.33□□□□□ -0.12
PPP4R1-218ENST00000580745 USP50Q70EL3 339 aaPredicted RBP14.33□□□□□ -0.12
PPP4R1-218ENST00000580745 TMC4Q7Z404 712 aa14.33□□□□□ -0.12
PPP4R1-218ENST00000580745 TRPM4Q8TD43 1214 aa14.33□□□□□ -0.12
PPP4R1-218ENST00000580745 BCL2L13Q9BXK5 485 aa14.33□□□□□ -0.12
PPP4R1-218ENST00000580745 DUOX1Q9NRD9 1551 aa14.33□□□□□ -0.12
PPP4R1-218ENST00000580745 DDX58O95786 925 aaKnown RBP14.32□□□□□ -0.12
PPP4R1-218ENST00000580745 KSR2Q6VAB6 950 aa14.32□□□□□ -0.12
PPP4R1-218ENST00000580745 TBC1D16Q8TBP0 767 aa14.32□□□□□ -0.12
PPP4R1-218ENST00000580745 ADARB2Q9NS39 739 aaKnown RBP14.32□□□□□ -0.12
PPP4R1-218ENST00000580745 ADAMTSL1Q8N6G6 1762 aa14.32□□□□□ -0.12
PPP4R1-218ENST00000580745 WTIPA6NIX2 430 aaPredicted RBP14.31□□□□□ -0.12
PPP4R1-218ENST00000580745 PSMD14O00487 310 aa14.31□□□□□ -0.12
PPP4R1-218ENST00000580745 PDE8AO60658 829 aa14.31□□□□□ -0.12
PPP4R1-218ENST00000580745 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
PPP4R1-218ENST00000580745 DLK2Q6UY11 383 aa14.31□□□□□ -0.12
PPP4R1-218ENST00000580745 STK31Q9BXU1 1019 aa14.31□□□□□ -0.12
PPP4R1-218ENST00000580745 SPINK5Q9NQ38 1064 aaPredicted RBP14.31□□□□□ -0.12
PPP4R1-218ENST00000580745 ABT1Q9ULW3 272 aaKnown RBP14.31□□□□□ -0.12
PPP4R1-218ENST00000580745 FANCIQ9NVI1 1328 aa14.31□□□□□ -0.12
PPP4R1-218ENST00000580745 ANKRD36CQ5JPF3 1778 aa14.31□□□□□ -0.12
PPP4R1-218ENST00000580745 SCN4AP35499 1836 aa14.3□□□□□ -0.12
PPP4R1-218ENST00000580745 ECE2O60344 883 aa14.3□□□□□ -0.12
PPP4R1-218ENST00000580745 UFL1O94874 794 aa14.3□□□□□ -0.12
PPP4R1-218ENST00000580745 TNIP1Q15025 636 aa14.3□□□□□ -0.12
PPP4R1-218ENST00000580745 CCDC152Q4G0S7 254 aa14.3□□□□□ -0.12
PPP4R1-218ENST00000580745 CST9Q5W186 159 aa14.3□□□□□ -0.12
PPP4R1-218ENST00000580745 MICALL2Q8IY33 904 aa14.3□□□□□ -0.12
PPP4R1-218ENST00000580745 GLIS2Q9BZE0 524 aaPredicted RBP14.3□□□□□ -0.12
PPP4R1-218ENST00000580745 CNOT7Q9UIV1 285 aaKnown RBP14.3□□□□□ -0.12
PPP4R1-218ENST00000580745 RTL9Q8NET4 1388 aa14.3□□□□□ -0.12
PPP4R1-218ENST00000580745 LAMB2P55268 1798 aa14.29□□□□□ -0.12
PPP4R1-218ENST00000580745 RASSF10A6NK89 507 aa14.29□□□□□ -0.12
PPP4R1-218ENST00000580745 FOXN1O15353 648 aa14.29□□□□□ -0.12
PPP4R1-218ENST00000580745 EGFRP00533 1210 aa14.29□□□□□ -0.12
PPP4R1-218ENST00000580745 EXOSC9Q06265 439 aaKnown RBP14.29□□□□□ -0.12
PPP4R1-218ENST00000580745 DEFB115Q30KQ5 88 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms