RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 GRAPQ13588 217 aa23.31■■□□□ 1.32
MKS1-209ENST00000580127 ANKRD13DQ6ZTN6 518 aa23.31■■□□□ 1.32
MKS1-209ENST00000580127 GRAPLQ8TC17 118 aaPredicted RBP23.31■■□□□ 1.32
MKS1-209ENST00000580127 MYBBP1AQ9BQG0 1328 aaKnown RBP23.31■■□□□ 1.32
MKS1-209ENST00000580127 HOXB7P09629 217 aa23.3■■□□□ 1.32
MKS1-209ENST00000580127 PLBD2Q8NHP8 589 aa23.3■■□□□ 1.32
MKS1-209ENST00000580127 ZC3H15Q8WU90 426 aaKnown RBP23.3■■□□□ 1.32
MKS1-209ENST00000580127 DBF4Q9UBU7 674 aaPredicted RBP23.3■■□□□ 1.32
MKS1-209ENST00000580127 CDHR2Q9BYE9 1310 aa23.3■■□□□ 1.32
MKS1-209ENST00000580127 HSP90B1P14625 803 aaKnown RBP23.29■■□□□ 1.32
MKS1-209ENST00000580127 HDGFL1Q5TGJ6 251 aa23.29■■□□□ 1.32
MKS1-209ENST00000580127 CCDC146Q8IYE0 955 aa23.29■■□□□ 1.32
MKS1-209ENST00000580127 CAPNS2Q96L46 248 aa23.29■■□□□ 1.32
MKS1-209ENST00000580127 GPR101Q96P66 508 aaPredicted RBP23.29■■□□□ 1.32
MKS1-209ENST00000580127 H7C1D1 291 aa23.28■■□□□ 1.32
MKS1-209ENST00000580127 GMPSP49915 693 aaPredicted RBP23.28■■□□□ 1.32
MKS1-209ENST00000580127 HYPKQ9NX55 129 aa23.28■■□□□ 1.32
MKS1-209ENST00000580127 COL4A5P29400 1685 aa23.28■■□□□ 1.32
MKS1-209ENST00000580127 ANKRD36CQ5JPF3 1778 aa23.27■■□□□ 1.32
MKS1-209ENST00000580127 GRM1Q13255 1194 aa23.27■■□□□ 1.32
MKS1-209ENST00000580127 CHPF2Q9P2E5 772 aa23.27■■□□□ 1.32
MKS1-209ENST00000580127 TRPM7Q96QT4 1865 aa23.27■■□□□ 1.32
MKS1-209ENST00000580127 RAD17O75943 681 aa23.26■■□□□ 1.31
MKS1-209ENST00000580127 MAP2K2P36507 400 aa23.26■■□□□ 1.31
MKS1-209ENST00000580127 DDX10Q13206 875 aaKnown RBP23.26■■□□□ 1.31
MKS1-209ENST00000580127 CST9Q5W186 159 aa23.26■■□□□ 1.31
MKS1-209ENST00000580127 CHMP4AQ9BY43 222 aa23.26■■□□□ 1.31
MKS1-209ENST00000580127 TLL2Q9Y6L7 1015 aa23.26■■□□□ 1.31
MKS1-209ENST00000580127 TRAF5O00463 557 aa23.25■■□□□ 1.31
MKS1-209ENST00000580127 WASHC4Q2M389 1173 aa23.25■■□□□ 1.31
MKS1-209ENST00000580127 CDC37L1Q7L3B6 337 aa23.25■■□□□ 1.31
MKS1-209ENST00000580127 PGAP2Q9UHJ9 254 aa23.25■■□□□ 1.31
MKS1-209ENST00000580127 CNOT7Q9UIV1 285 aaKnown RBP23.25■■□□□ 1.31
MKS1-209ENST00000580127 HSPA8P11142 646 aaKnown RBP23.24■■□□□ 1.31
MKS1-209ENST00000580127 CFAP44Q96MT7 982 aa23.24■■□□□ 1.31
MKS1-209ENST00000580127 NSFL1CQ9UNZ2 370 aaKnown RBP23.24■■□□□ 1.31
MKS1-209ENST00000580127 TRIM35Q9UPQ4 493 aa23.24■■□□□ 1.31
MKS1-209ENST00000580127 LTBP1Q14766 1721 aa23.24■■□□□ 1.31
MKS1-209ENST00000580127 CELF2O95319 508 aaKnown RBP23.23■■□□□ 1.31
MKS1-209ENST00000580127 SF3B3Q15393 1217 aaKnown RBP23.23■■□□□ 1.31
MKS1-209ENST00000580127 CYP4F22Q6NT55 531 aa23.23■■□□□ 1.31
MKS1-209ENST00000580127 FAM89AQ96GI7 184 aa23.23■■□□□ 1.31
MKS1-209ENST00000580127 EYA3Q99504 573 aa23.23■■□□□ 1.31
MKS1-209ENST00000580127 C6orf229H3BNL8 230 aa23.22■■□□□ 1.31
MKS1-209ENST00000580127 CALD1Q05682 793 aaKnown RBP23.22■■□□□ 1.31
MKS1-209ENST00000580127 FMR1Q06787 632 aaKnown RBP eCLIP23.22■■□□□ 1.31
MKS1-209ENST00000580127 DPF2Q92785 391 aa23.22■■□□□ 1.31
MKS1-209ENST00000580127 HHIPL1Q96JK4 782 aa23.22■■□□□ 1.31
MKS1-209ENST00000580127 CA12O43570 354 aa23.21■■□□□ 1.31
MKS1-209ENST00000580127 TRIM28Q13263 835 aaKnown RBP23.21■■□□□ 1.31
MKS1-209ENST00000580127 KRT24Q2M2I5 525 aa23.21■■□□□ 1.31
MKS1-209ENST00000580127 DUSP27Q5VZP5 1158 aa23.21■■□□□ 1.31
MKS1-209ENST00000580127 SLC51AQ86UW1 340 aa23.21■■□□□ 1.31
MKS1-209ENST00000580127 ISCA1Q9BUE6 129 aa23.21■■□□□ 1.31
MKS1-209ENST00000580127 ADAMTS8Q9UP79 889 aa23.21■■□□□ 1.31
MKS1-209ENST00000580127 LAMB2P55268 1798 aa23.21■■□□□ 1.31
MKS1-209ENST00000580127 ATP5J2-PTCD1G3V325 749 aa23.2■■□□□ 1.3
MKS1-209ENST00000580127 G3V3G9 751 aa23.2■■□□□ 1.3
MKS1-209ENST00000580127 DCAF8Q5TAQ9 597 aa23.2■■□□□ 1.3
MKS1-209ENST00000580127 RIC3Q7Z5B4 369 aa23.2■■□□□ 1.3
MKS1-209ENST00000580127 SAPCD2Q86UD0 394 aa23.2■■□□□ 1.3
MKS1-209ENST00000580127 GLIS2Q9BZE0 524 aaPredicted RBP23.2■■□□□ 1.3
MKS1-209ENST00000580127 RPS8P62241 208 aaKnown RBP23.19■■□□□ 1.3
MKS1-209ENST00000580127 GOLGA2Q08379 1002 aa23.19■■□□□ 1.3
MKS1-209ENST00000580127 IRS4O14654 1257 aaPredicted RBP23.18■■□□□ 1.3
MKS1-209ENST00000580127 RPS12P25398 132 aaKnown RBP23.18■■□□□ 1.3
MKS1-209ENST00000580127 ZC3H12CQ9C0D7 883 aaKnown RBP23.18■■□□□ 1.3
MKS1-209ENST00000580127 ZNF408Q9H9D4 720 aa23.18■■□□□ 1.3
MKS1-209ENST00000580127 RIMBP2O15034 1052 aa23.17■■□□□ 1.3
MKS1-209ENST00000580127 GNAI1P63096 354 aa23.17■■□□□ 1.3
MKS1-209ENST00000580127 MICALL2Q8IY33 904 aa23.17■■□□□ 1.3
MKS1-209ENST00000580127 HIRAP54198 1017 aaPredicted RBP23.16■■□□□ 1.3
MKS1-209ENST00000580127 RTL5Q5HYW3 569 aaPredicted RBP23.16■■□□□ 1.3
MKS1-209ENST00000580127 CELF1Q92879 486 aaKnown RBP23.16■■□□□ 1.3
MKS1-209ENST00000580127 ZNF428Q96B54 188 aa23.16■■□□□ 1.3
MKS1-209ENST00000580127 ABHD8Q96I13 439 aa23.16■■□□□ 1.3
MKS1-209ENST00000580127 TAF1P21675 1872 aa23.15■■□□□ 1.3
MKS1-209ENST00000580127 YDJCA8MPS7 323 aa23.15■■□□□ 1.3
MKS1-209ENST00000580127 ZBTB38Q8NAP3 1195 aaPredicted RBP23.15■■□□□ 1.3
MKS1-209ENST00000580127 DCPSQ96C86 337 aaKnown RBP23.15■■□□□ 1.3
MKS1-209ENST00000580127 DBNDD1Q9H9R9 158 aa23.15■■□□□ 1.3
MKS1-209ENST00000580127 PSMD14O00487 310 aa23.14■■□□□ 1.29
MKS1-209ENST00000580127 AOC2O75106 756 aa23.14■■□□□ 1.29
MKS1-209ENST00000580127 GPSM2P81274 684 aa23.14■■□□□ 1.29
MKS1-209ENST00000580127 USP48Q86UV5 1035 aa23.14■■□□□ 1.29
MKS1-209ENST00000580127 MBIPQ9NS73 344 aa23.14■■□□□ 1.29
MKS1-209ENST00000580127 ANKIB1Q9P2G1 1089 aa23.14■■□□□ 1.29
MKS1-209ENST00000580127 DDX58O95786 925 aaKnown RBP23.13■■□□□ 1.29
MKS1-209ENST00000580127 BRPF1P55201 1214 aaPredicted RBP23.13■■□□□ 1.29
MKS1-209ENST00000580127 NOGQ13253 232 aa23.13■■□□□ 1.29
MKS1-209ENST00000580127 TRPM4Q8TD43 1214 aa23.13■■□□□ 1.29
MKS1-209ENST00000580127 IFT57Q9NWB7 429 aa23.13■■□□□ 1.29
MKS1-209ENST00000580127 POLLQ9UGP5 575 aa23.13■■□□□ 1.29
MKS1-209ENST00000580127 ZBTB12Q9Y330 459 aaPredicted RBP23.13■■□□□ 1.29
MKS1-209ENST00000580127 ECE2O60344 883 aa23.12■■□□□ 1.29
MKS1-209ENST00000580127 CCDC152Q4G0S7 254 aa23.12■■□□□ 1.29
MKS1-209ENST00000580127 KRT26Q7Z3Y9 468 aa23.12■■□□□ 1.29
MKS1-209ENST00000580127 C2orf69Q8N8R5 385 aa23.12■■□□□ 1.29
MKS1-209ENST00000580127 CCDC191Q8NCU4 936 aa23.12■■□□□ 1.29
MKS1-209ENST00000580127 TBC1D16Q8TBP0 767 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms