RNA–Protein interactions for RNA: ENST00000579344.1

CCR7-203, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 1 (best) BASIC

Gene CCR7, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-203ENST00000579344 FCHSD1Q86WN1 690 aa18.67■□□□□ 0.58
CCR7-203ENST00000579344 DNAI1Q9UI46 699 aa18.67■□□□□ 0.58
CCR7-203ENST00000579344 RCOR1Q9UKL0 485 aa18.67■□□□□ 0.58
CCR7-203ENST00000579344 USP16Q9Y5T5 823 aa18.67■□□□□ 0.58
CCR7-203ENST00000579344 CPA1P15085 419 aa18.67■□□□□ 0.58
CCR7-203ENST00000579344 NOP2P46087 812 aaKnown RBP18.67■□□□□ 0.58
CCR7-203ENST00000579344 CREB3L3Q68CJ9 461 aa18.67■□□□□ 0.58
CCR7-203ENST00000579344 NBPF11Q86T75 865 aa18.67■□□□□ 0.58
CCR7-203ENST00000579344 AK7Q96M32 723 aa18.67■□□□□ 0.58
CCR7-203ENST00000579344 LARP6Q9BRS8 491 aaKnown RBP18.67■□□□□ 0.58
CCR7-203ENST00000579344 IL1RAPL2Q9NP60 686 aa18.67■□□□□ 0.58
CCR7-203ENST00000579344 GEMIN8Q9NWZ8 242 aaKnown RBP18.67■□□□□ 0.58
CCR7-203ENST00000579344 TRMT1Q9NXH9 659 aaKnown RBP18.67■□□□□ 0.58
CCR7-203ENST00000579344 HMG20BQ9P0W2 317 aa18.67■□□□□ 0.58
CCR7-203ENST00000579344 SPG7Q9UQ90 795 aa18.67■□□□□ 0.58
CCR7-203ENST00000579344 NALCNQ8IZF0 1738 aa18.66■□□□□ 0.58
CCR7-203ENST00000579344 LRRFIP1Q32MZ4 808 aaKnown RBP18.66■□□□□ 0.58
CCR7-203ENST00000579344 NECAB1Q8N987 351 aa18.66■□□□□ 0.58
CCR7-203ENST00000579344 EVI5LQ96CN4 794 aa18.66■□□□□ 0.58
CCR7-203ENST00000579344 ATG3Q9NT62 314 aa18.66■□□□□ 0.58
CCR7-203ENST00000579344 SURF6O75683 361 aaKnown RBP18.65■□□□□ 0.58
CCR7-203ENST00000579344 CASQ1P31415 396 aa18.65■□□□□ 0.58
CCR7-203ENST00000579344 LARP1Q6PKG0 1096 aaKnown RBP18.65■□□□□ 0.58
CCR7-203ENST00000579344 FERMT3Q86UX7 667 aa18.65■□□□□ 0.58
CCR7-203ENST00000579344 FBXO18Q8NFZ0 1043 aa18.65■□□□□ 0.58
CCR7-203ENST00000579344 CHMP3Q9Y3E7 222 aa18.65■□□□□ 0.58
CCR7-203ENST00000579344 KDRP35968 1356 aa18.65■□□□□ 0.58
CCR7-203ENST00000579344 WASLO00401 505 aaPredicted RBP18.65■□□□□ 0.58
CCR7-203ENST00000579344 RPS6KB1P23443 525 aa18.65■□□□□ 0.58
CCR7-203ENST00000579344 PSME1Q06323 249 aa18.65■□□□□ 0.58
CCR7-203ENST00000579344 ZSCAN26Q16670 478 aa18.65■□□□□ 0.58
CCR7-203ENST00000579344 JAKMIP3Q5VZ66 844 aa18.65■□□□□ 0.58
CCR7-203ENST00000579344 PPP1R42Q7Z4L9 355 aa18.65■□□□□ 0.58
CCR7-203ENST00000579344 NFATC2IPQ8NCF5 419 aa18.65■□□□□ 0.58
CCR7-203ENST00000579344 ENGASEQ8NFI3 743 aa18.65■□□□□ 0.58
CCR7-203ENST00000579344 SIRT1Q96EB6 747 aa18.65■□□□□ 0.58
CCR7-203ENST00000579344 RPS6KA5O75582 802 aa18.64■□□□□ 0.57
CCR7-203ENST00000579344 NPM1P06748 294 aaKnown RBP eCLIP18.64■□□□□ 0.57
CCR7-203ENST00000579344 MTX1Q13505 466 aa18.64■□□□□ 0.57
CCR7-203ENST00000579344 RRS1Q15050 365 aaKnown RBP18.64■□□□□ 0.57
CCR7-203ENST00000579344 SYT10Q6XYQ8 523 aa18.64■□□□□ 0.57
CCR7-203ENST00000579344 GPR161Q8N6U8 529 aaKnown RBP18.64■□□□□ 0.57
CCR7-203ENST00000579344 GPATCH3Q96I76 525 aa18.64■□□□□ 0.57
CCR7-203ENST00000579344 BRMS1Q9HCU9 246 aa18.64■□□□□ 0.57
CCR7-203ENST00000579344 TFIP11Q9UBB9 837 aaKnown RBP18.64■□□□□ 0.57
CCR7-203ENST00000579344 RBM8AQ9Y5S9 174 aaKnown RBP18.64■□□□□ 0.57
CCR7-203ENST00000579344 OVOS2A0A0J9YW53 1432 aa18.64■□□□□ 0.57
CCR7-203ENST00000579344 OVOS2Q6IE36 1432 aa18.64■□□□□ 0.57
CCR7-203ENST00000579344 MYO1CO00159 1063 aa18.63■□□□□ 0.57
CCR7-203ENST00000579344 TBC1D8O95759 1140 aa18.63■□□□□ 0.57
CCR7-203ENST00000579344 SFPQP23246 707 aaKnown RBP eCLIP18.63■□□□□ 0.57
CCR7-203ENST00000579344 NAA16Q6N069 864 aaPredicted RBP18.63■□□□□ 0.57
CCR7-203ENST00000579344 FAM173BQ6P4H8 233 aa18.63■□□□□ 0.57
CCR7-203ENST00000579344 BLOC1S2Q6QNY1 142 aa18.63■□□□□ 0.57
CCR7-203ENST00000579344 KRBA2Q6ZNG9 492 aa18.63■□□□□ 0.57
CCR7-203ENST00000579344 PLCD3Q8N3E9 789 aa18.63■□□□□ 0.57
CCR7-203ENST00000579344 LLPHQ9BRT6 129 aaKnown RBP18.63■□□□□ 0.57
CCR7-203ENST00000579344 CEP170BQ9Y4F5 1589 aaPredicted RBP18.63■□□□□ 0.57
CCR7-203ENST00000579344 SLC27A2O14975 620 aa18.63■□□□□ 0.57
CCR7-203ENST00000579344 FAM160A1Q05DH4 1040 aa18.63■□□□□ 0.57
CCR7-203ENST00000579344 ECHDC1Q9NTX5 307 aa18.63■□□□□ 0.57
CCR7-203ENST00000579344 USP31Q70CQ4 1352 aa18.62■□□□□ 0.57
CCR7-203ENST00000579344 IVLP07476 585 aa18.62■□□□□ 0.57
CCR7-203ENST00000579344 TNNT3P45378 269 aaPredicted RBP18.62■□□□□ 0.57
CCR7-203ENST00000579344 CC2D1AQ6P1N0 951 aaPredicted RBP18.62■□□□□ 0.57
CCR7-203ENST00000579344 CCDC73Q6ZRK6 1079 aa18.62■□□□□ 0.57
CCR7-203ENST00000579344 SMARCE1Q969G3 411 aa18.62■□□□□ 0.57
CCR7-203ENST00000579344 RSPH14Q9UHP6 348 aa18.62■□□□□ 0.57
CCR7-203ENST00000579344 NPHP4O75161 1426 aaPredicted RBP18.62■□□□□ 0.57
CCR7-203ENST00000579344 DIP2CQ9Y2E4 1556 aa18.62■□□□□ 0.57
CCR7-203ENST00000579344 CHRM1P11229 460 aaPredicted RBP18.61■□□□□ 0.57
CCR7-203ENST00000579344 ADD1P35611 737 aaKnown RBP18.61■□□□□ 0.57
CCR7-203ENST00000579344 TOB2Q14106 344 aaPredicted RBP18.61■□□□□ 0.57
CCR7-203ENST00000579344 KRT32Q14532 448 aa18.61■□□□□ 0.57
CCR7-203ENST00000579344 ARMCX5Q6P1M9 558 aa18.61■□□□□ 0.57
CCR7-203ENST00000579344 SRLQ86TD4 932 aa18.61■□□□□ 0.57
CCR7-203ENST00000579344 MNS1Q8NEH6 495 aa18.61■□□□□ 0.57
CCR7-203ENST00000579344 NEK11Q8NG66 645 aa18.61■□□□□ 0.57
CCR7-203ENST00000579344 MPHOSPH8Q99549 860 aa18.61■□□□□ 0.57
CCR7-203ENST00000579344 MYH15Q9Y2K3 1946 aa18.61■□□□□ 0.57
CCR7-203ENST00000579344 KINO60870 393 aaKnown RBP18.6■□□□□ 0.57
CCR7-203ENST00000579344 MAP4K4O95819 1239 aaPredicted RBP18.6■□□□□ 0.57
CCR7-203ENST00000579344 TRIM65Q6PJ69 517 aa18.6■□□□□ 0.57
CCR7-203ENST00000579344 MYO1BO43795 1136 aa18.6■□□□□ 0.57
CCR7-203ENST00000579344 DHX16O60231 1041 aaKnown RBP18.6■□□□□ 0.57
CCR7-203ENST00000579344 OAS2P29728 719 aaKnown RBP18.6■□□□□ 0.57
CCR7-203ENST00000579344 SMC1AQ14683 1233 aaKnown RBP18.6■□□□□ 0.57
CCR7-203ENST00000579344 ERC1Q8IUD2 1116 aa18.6■□□□□ 0.57
CCR7-203ENST00000579344 CCAR1Q8IX12 1150 aaKnown RBP18.6■□□□□ 0.57
CCR7-203ENST00000579344 GOLGA6L1Q8N7Z2 621 aa18.6■□□□□ 0.57
CCR7-203ENST00000579344 LRRN4CLQ8ND94 238 aa18.6■□□□□ 0.57
CCR7-203ENST00000579344 CHMP4AQ9BY43 222 aa18.6■□□□□ 0.57
CCR7-203ENST00000579344 ZRANB1Q9UGI0 708 aa18.6■□□□□ 0.57
CCR7-203ENST00000579344 STAG3Q9UJ98 1225 aa18.6■□□□□ 0.57
CCR7-203ENST00000579344 CCDC61Q9Y6R9 512 aa18.6■□□□□ 0.57
CCR7-203ENST00000579344 PEAK1Q9H792 1746 aa18.6■□□□□ 0.57
CCR7-203ENST00000579344 PLEKHG2Q9H7P9 1386 aa18.59■□□□□ 0.57
CCR7-203ENST00000579344 GOLGA6L9A6NEM1 432 aa18.59■□□□□ 0.57
CCR7-203ENST00000579344 NOM1Q5C9Z4 860 aaKnown RBP18.59■□□□□ 0.57
CCR7-203ENST00000579344 TEX2Q8IWB9 1127 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms