RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 CNKSR1Q969H4 720 aa19.51■□□□□ 0.71
IFT20-206ENST00000578122 SRCIN1Q9C0H9 1055 aa19.51■□□□□ 0.71
IFT20-206ENST00000578122 SRCAPQ6ZRS2 3230 aa19.51■□□□□ 0.71
IFT20-206ENST00000578122 H7C1W4 665 aa19.5■□□□□ 0.71
IFT20-206ENST00000578122 RPGRQ92834 1020 aaKnown RBP19.5■□□□□ 0.71
IFT20-206ENST00000578122 SLX4Q8IY92 1834 aa19.5■□□□□ 0.71
IFT20-206ENST00000578122 CDHR2Q9BYE9 1310 aa19.5■□□□□ 0.71
IFT20-206ENST00000578122 GRIN3BO60391 1043 aa19.49■□□□□ 0.71
IFT20-206ENST00000578122 UBE3BQ7Z3V4 1068 aa19.49■□□□□ 0.71
IFT20-206ENST00000578122 FRAT1Q92837 279 aaPredicted RBP19.49■□□□□ 0.71
IFT20-206ENST00000578122 RBM17Q96I25 401 aaKnown RBP19.49■□□□□ 0.71
IFT20-206ENST00000578122 MYH3P11055 1940 aa19.49■□□□□ 0.71
IFT20-206ENST00000578122 ALDH1B1P30837 517 aa19.48■□□□□ 0.71
IFT20-206ENST00000578122 HOXA10P31260 410 aaPredicted RBP19.48■□□□□ 0.71
IFT20-206ENST00000578122 PDE8AO60658 829 aa19.47■□□□□ 0.71
IFT20-206ENST00000578122 PRPF40BQ6NWY9 871 aaKnown RBP19.47■□□□□ 0.71
IFT20-206ENST00000578122 CRAMP1Q96RY5 1269 aa19.47■□□□□ 0.71
IFT20-206ENST00000578122 RCAN3Q9UKA8 241 aa19.47■□□□□ 0.71
IFT20-206ENST00000578122 SSUH2Q9Y2M2 353 aa19.47■□□□□ 0.71
IFT20-206ENST00000578122 GRM8O00222 908 aa19.46■□□□□ 0.71
IFT20-206ENST00000578122 CCT4P50991 539 aaKnown RBP19.46■□□□□ 0.71
IFT20-206ENST00000578122 CASP7P55210 303 aa19.46■□□□□ 0.71
IFT20-206ENST00000578122 SF3B3Q15393 1217 aaKnown RBP19.46■□□□□ 0.71
IFT20-206ENST00000578122 ATF7IPQ6VMQ6 1270 aa19.46■□□□□ 0.71
IFT20-206ENST00000578122 C9orf78Q9NZ63 289 aaPredicted RBP19.46■□□□□ 0.71
IFT20-206ENST00000578122 TAF1P21675 1872 aa19.45■□□□□ 0.7
IFT20-206ENST00000578122 TRIM27P14373 513 aa19.45■□□□□ 0.7
IFT20-206ENST00000578122 ZKSCAN2Q63HK3 967 aa19.45■□□□□ 0.7
IFT20-206ENST00000578122 DDX46Q7L014 1031 aaKnown RBP19.45■□□□□ 0.7
IFT20-206ENST00000578122 PLA2G12BQ9BX93 195 aa19.44■□□□□ 0.7
IFT20-206ENST00000578122 CHD4Q14839 1912 aa19.43■□□□□ 0.7
IFT20-206ENST00000578122 C21orf2O43822 256 aa19.43■□□□□ 0.7
IFT20-206ENST00000578122 CTSWP56202 376 aa19.43■□□□□ 0.7
IFT20-206ENST00000578122 CCDC152Q4G0S7 254 aa19.43■□□□□ 0.7
IFT20-206ENST00000578122 ARHGAP27Q6ZUM4 889 aa19.43■□□□□ 0.7
IFT20-206ENST00000578122 TNNQ9UQP3 1299 aa19.43■□□□□ 0.7
IFT20-206ENST00000578122 ABCC4O15439 1325 aa19.43■□□□□ 0.7
IFT20-206ENST00000578122 FXR2P51116 673 aaKnown RBP eCLIP19.42■□□□□ 0.7
IFT20-206ENST00000578122 INTS3Q68E01 1043 aaKnown RBP19.41■□□□□ 0.7
IFT20-206ENST00000578122 TTLL11Q8NHH1 800 aa19.41■□□□□ 0.7
IFT20-206ENST00000578122 C7orf43Q8WVR3 580 aa19.41■□□□□ 0.7
IFT20-206ENST00000578122 CLUAP1Q96AJ1 413 aa19.41■□□□□ 0.7
IFT20-206ENST00000578122 CCDC85AQ96PX6 553 aaPredicted RBP19.41■□□□□ 0.7
IFT20-206ENST00000578122 UTYO14607 1347 aa19.41■□□□□ 0.7
IFT20-206ENST00000578122 PPEF1O14829 653 aaPredicted RBP19.4■□□□□ 0.7
IFT20-206ENST00000578122 BBOX1O75936 387 aa19.4■□□□□ 0.7
IFT20-206ENST00000578122 NBPF7P0C2Y1 421 aaPredicted RBP19.4■□□□□ 0.7
IFT20-206ENST00000578122 GRAPQ13588 217 aa19.4■□□□□ 0.7
IFT20-206ENST00000578122 SOGA3Q5TF21 947 aa19.4■□□□□ 0.7
IFT20-206ENST00000578122 GRAPLQ8TC17 118 aaPredicted RBP19.4■□□□□ 0.7
IFT20-206ENST00000578122 USP44Q9H0E7 712 aa19.4■□□□□ 0.7
IFT20-206ENST00000578122 FER1L6Q2WGJ9 1857 aa19.39■□□□□ 0.7
IFT20-206ENST00000578122 FOXO4P98177 505 aa19.39■□□□□ 0.69
IFT20-206ENST00000578122 SEC31BQ9NQW1 1179 aa19.39■□□□□ 0.69
IFT20-206ENST00000578122 CSF1RP07333 972 aa19.38■□□□□ 0.69
IFT20-206ENST00000578122 FTSJ3Q8IY81 847 aaKnown RBP19.38■□□□□ 0.69
IFT20-206ENST00000578122 CELF1Q92879 486 aaKnown RBP19.38■□□□□ 0.69
IFT20-206ENST00000578122 SUCLG2Q96I99 432 aa19.38■□□□□ 0.69
IFT20-206ENST00000578122 CCDC88AQ3V6T2 1871 aa19.37■□□□□ 0.69
IFT20-206ENST00000578122 RTL9Q8NET4 1388 aa19.37■□□□□ 0.69
IFT20-206ENST00000578122 RPS8P62241 208 aaKnown RBP19.37■□□□□ 0.69
IFT20-206ENST00000578122 CCDC93Q567U6 631 aa19.37■□□□□ 0.69
IFT20-206ENST00000578122 EPHA10Q5JZY3 1008 aa19.37■□□□□ 0.69
IFT20-206ENST00000578122 CC2D2BQ6DHV5 1058 aa19.37■□□□□ 0.69
IFT20-206ENST00000578122 OLFM4Q6UX06 510 aa19.37■□□□□ 0.69
IFT20-206ENST00000578122 DZIP1LQ8IYY4 767 aaKnown RBP19.37■□□□□ 0.69
IFT20-206ENST00000578122 TMEM57Q8N5G2 664 aa19.37■□□□□ 0.69
IFT20-206ENST00000578122 SPDYE1Q8NFV5 336 aaPredicted RBP19.37■□□□□ 0.69
IFT20-206ENST00000578122 GREM2Q9H772 168 aa19.37■□□□□ 0.69
IFT20-206ENST00000578122 ATP6V0A2Q9Y487 856 aa19.37■□□□□ 0.69
IFT20-206ENST00000578122 SBF1O95248 1867 aa19.37■□□□□ 0.69
IFT20-206ENST00000578122 COL4A1P02462 1669 aa19.36■□□□□ 0.69
IFT20-206ENST00000578122 TMC4Q7Z404 712 aa19.36■□□□□ 0.69
IFT20-206ENST00000578122 SP8Q8IXZ3 490 aa19.36■□□□□ 0.69
IFT20-206ENST00000578122 KAZALD1Q96I82 304 aa19.36■□□□□ 0.69
IFT20-206ENST00000578122 TMX4Q9H1E5 349 aaPredicted RBP19.36■□□□□ 0.69
IFT20-206ENST00000578122 SPEF2Q9C093 1822 aa19.35■□□□□ 0.69
IFT20-206ENST00000578122 NFKBIEO00221 500 aa19.35■□□□□ 0.69
IFT20-206ENST00000578122 UBTFL1P0CB47 393 aaPredicted RBP19.35■□□□□ 0.69
IFT20-206ENST00000578122 RLBP1P12271 317 aa19.35■□□□□ 0.69
IFT20-206ENST00000578122 FAM161AQ3B820 660 aa19.35■□□□□ 0.69
IFT20-206ENST00000578122 LMBR1LQ6UX01 489 aa19.35■□□□□ 0.69
IFT20-206ENST00000578122 RTKN2Q8IZC4 609 aa19.35■□□□□ 0.69
IFT20-206ENST00000578122 CDC5LQ99459 802 aaKnown RBP19.35■□□□□ 0.69
IFT20-206ENST00000578122 CLEC11AQ9Y240 323 aa19.35■□□□□ 0.69
IFT20-206ENST00000578122 CHMP3Q9Y3E7 222 aa19.35■□□□□ 0.69
IFT20-206ENST00000578122 PLIN1O60240 522 aa19.34■□□□□ 0.69
IFT20-206ENST00000578122 MS4A1P11836 297 aa19.34■□□□□ 0.69
IFT20-206ENST00000578122 RASSF7Q02833 373 aa19.34■□□□□ 0.69
IFT20-206ENST00000578122 GRIPAP1Q4V328 841 aa19.34■□□□□ 0.69
IFT20-206ENST00000578122 SLC51AQ86UW1 340 aa19.34■□□□□ 0.69
IFT20-206ENST00000578122 ANKRD18AQ8IVF6 992 aa19.34■□□□□ 0.69
IFT20-206ENST00000578122 MEIS3Q99687 375 aa19.34■□□□□ 0.69
IFT20-206ENST00000578122 HDAC5Q9UQL6 1122 aa19.34■□□□□ 0.69
IFT20-206ENST00000578122 GNAI3P08754 354 aa19.33■□□□□ 0.68
IFT20-206ENST00000578122 ITGA6P23229 1130 aa19.33■□□□□ 0.68
IFT20-206ENST00000578122 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.33■□□□□ 0.68
IFT20-206ENST00000578122 PANK1Q8TE04 598 aa19.33■□□□□ 0.68
IFT20-206ENST00000578122 TAOK3Q9H2K8 898 aa19.33■□□□□ 0.68
IFT20-206ENST00000578122 BICC1Q9H694 974 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms