RNA–Protein interactions for RNA: ENST00000577828.5

LINC00511-204, long intergenic non-protein coding RNA 511, humanhuman

TSL 3 BASIC

Gene LINC00511, Length 538 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-204ENST00000577828 FOXO4P98177 505 aa12.69□□□□□ -0.38
LINC00511-204ENST00000577828 SF3B3Q15393 1217 aaKnown RBP12.69□□□□□ -0.38
LINC00511-204ENST00000577828 CEP85Q6P2H3 762 aa12.69□□□□□ -0.38
LINC00511-204ENST00000577828 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
LINC00511-204ENST00000577828 ANKRD44Q8N8A2 993 aa12.69□□□□□ -0.38
LINC00511-204ENST00000577828 DDX60Q8IY21 1712 aaKnown RBP12.68□□□□□ -0.38
LINC00511-204ENST00000577828 KLRG2A4D1S0 409 aaPredicted RBP12.68□□□□□ -0.38
LINC00511-204ENST00000577828 SRGAP3O43295 1099 aa12.68□□□□□ -0.38
LINC00511-204ENST00000577828 IFIT5Q13325 482 aaKnown RBP12.68□□□□□ -0.38
LINC00511-204ENST00000577828 CCDC57Q2TAC2 916 aa12.68□□□□□ -0.38
LINC00511-204ENST00000577828 CRY2Q49AN0 593 aa12.68□□□□□ -0.38
LINC00511-204ENST00000577828 LMBR1LQ6UX01 489 aa12.68□□□□□ -0.38
LINC00511-204ENST00000577828 TTLL11Q8NHH1 800 aa12.68□□□□□ -0.38
LINC00511-204ENST00000577828 JARID2Q92833 1246 aaPredicted RBP12.68□□□□□ -0.38
LINC00511-204ENST00000577828 RPGRQ92834 1020 aaKnown RBP12.68□□□□□ -0.38
LINC00511-204ENST00000577828 KAZALD1Q96I82 304 aa12.68□□□□□ -0.38
LINC00511-204ENST00000577828 C1orf115Q9H7X2 142 aa12.68□□□□□ -0.38
LINC00511-204ENST00000577828 CD2APQ9Y5K6 639 aa12.68□□□□□ -0.38
LINC00511-204ENST00000577828 ATP8B2P98198 1209 aa12.67□□□□□ -0.38
LINC00511-204ENST00000577828 HDAC1Q13547 482 aaPredicted RBP12.67□□□□□ -0.38
LINC00511-204ENST00000577828 SYNE4Q8N205 404 aa12.67□□□□□ -0.38
LINC00511-204ENST00000577828 CDC5LQ99459 802 aaKnown RBP12.67□□□□□ -0.38
LINC00511-204ENST00000577828 RWDD1Q9H446 243 aaPredicted RBP12.67□□□□□ -0.38
LINC00511-204ENST00000577828 CHMP3Q9Y3E7 222 aa12.67□□□□□ -0.38
LINC00511-204ENST00000577828 MYH3P11055 1940 aa12.66□□□□□ -0.38
LINC00511-204ENST00000577828 ANKRD18BA2A2Z9 1011 aa12.66□□□□□ -0.38
LINC00511-204ENST00000577828 H0YIN7 160 aa12.66□□□□□ -0.38
LINC00511-204ENST00000577828 HSP90AB4PQ58FF6 505 aa12.66□□□□□ -0.38
LINC00511-204ENST00000577828 TAF7LQ5H9L4 462 aa12.66□□□□□ -0.38
LINC00511-204ENST00000577828 EPHA10Q5JZY3 1008 aa12.66□□□□□ -0.38
LINC00511-204ENST00000577828 DDX46Q7L014 1031 aaKnown RBP12.66□□□□□ -0.38
LINC00511-204ENST00000577828 SSH3Q8TE77 659 aa12.66□□□□□ -0.38
LINC00511-204ENST00000577828 RBM17Q96I25 401 aaKnown RBP12.66□□□□□ -0.38
LINC00511-204ENST00000577828 PPP4R2Q9NY27 417 aa12.66□□□□□ -0.38
LINC00511-204ENST00000577828 FBXO3Q9UK99 471 aa12.66□□□□□ -0.38
LINC00511-204ENST00000577828 TNRC6CQ9HCJ0 1690 aaKnown RBP12.65□□□□□ -0.38
LINC00511-204ENST00000577828 NPR1P16066 1061 aa12.65□□□□□ -0.38
LINC00511-204ENST00000577828 ITGA6P23229 1130 aa12.65□□□□□ -0.38
LINC00511-204ENST00000577828 HOXA10P31260 410 aaPredicted RBP12.65□□□□□ -0.38
LINC00511-204ENST00000577828 TGFB2P61812 414 aa12.65□□□□□ -0.38
LINC00511-204ENST00000577828 POLA2Q14181 598 aa12.65□□□□□ -0.38
LINC00511-204ENST00000577828 FAM161AQ3B820 660 aa12.65□□□□□ -0.38
LINC00511-204ENST00000577828 TMC4Q7Z404 712 aa12.65□□□□□ -0.38
LINC00511-204ENST00000577828 NLGN2Q8NFZ4 835 aa12.65□□□□□ -0.38
LINC00511-204ENST00000577828 GREM2Q9H772 168 aa12.65□□□□□ -0.38
LINC00511-204ENST00000577828 PCDHB15Q9Y5E8 787 aa12.65□□□□□ -0.38
LINC00511-204ENST00000577828 ALDH1B1P30837 517 aa12.64□□□□□ -0.39
LINC00511-204ENST00000577828 IGHMBP2P38935 993 aaKnown RBP12.64□□□□□ -0.39
LINC00511-204ENST00000577828 C1QTNF8P60827 252 aa12.64□□□□□ -0.39
LINC00511-204ENST00000577828 STYK1Q6J9G0 422 aa12.64□□□□□ -0.39
LINC00511-204ENST00000577828 C2CD5Q86YS7 1000 aa12.64□□□□□ -0.39
LINC00511-204ENST00000577828 MASTLQ96GX5 879 aa12.64□□□□□ -0.39
LINC00511-204ENST00000577828 CCDC136Q96JN2 1154 aa12.64□□□□□ -0.39
LINC00511-204ENST00000577828 CRAMP1Q96RY5 1269 aa12.64□□□□□ -0.39
LINC00511-204ENST00000577828 COPRSQ9NQ92 184 aa12.64□□□□□ -0.39
LINC00511-204ENST00000577828 KIF13BQ9NQT8 1826 aa12.64□□□□□ -0.39
LINC00511-204ENST00000577828 PNMA6EA0A0J9YXQ4 647 aa12.63□□□□□ -0.39
LINC00511-204ENST00000577828 SRGNP10124 158 aa12.63□□□□□ -0.39
LINC00511-204ENST00000577828 C3orf67Q6ZVT6 689 aa12.63□□□□□ -0.39
LINC00511-204ENST00000577828 ERC1Q8IUD2 1116 aa12.63□□□□□ -0.39
LINC00511-204ENST00000577828 ANKRD18AQ8IVF6 992 aa12.63□□□□□ -0.39
LINC00511-204ENST00000577828 CCDC24Q8N4L8 307 aa12.63□□□□□ -0.39
LINC00511-204ENST00000577828 GCC1Q96CN9 775 aa12.63□□□□□ -0.39
LINC00511-204ENST00000577828 ANKRD31Q8N7Z5 1873 aa12.62□□□□□ -0.39
LINC00511-204ENST00000577828 BBOX1O75936 387 aa12.62□□□□□ -0.39
LINC00511-204ENST00000577828 CIAO1O76071 339 aa12.62□□□□□ -0.39
LINC00511-204ENST00000577828 GRAPQ13588 217 aa12.62□□□□□ -0.39
LINC00511-204ENST00000577828 SIRT2Q8IXJ6 389 aa12.62□□□□□ -0.39
LINC00511-204ENST00000577828 GRAPLQ8TC17 118 aaPredicted RBP12.62□□□□□ -0.39
LINC00511-204ENST00000577828 CNKSR1Q969H4 720 aa12.62□□□□□ -0.39
LINC00511-204ENST00000577828 CCDC85AQ96PX6 553 aaPredicted RBP12.62□□□□□ -0.39
LINC00511-204ENST00000577828 MPHOSPH8Q99549 860 aa12.62□□□□□ -0.39
LINC00511-204ENST00000577828 TMX4Q9H1E5 349 aaPredicted RBP12.62□□□□□ -0.39
LINC00511-204ENST00000577828 NOP58Q9Y2X3 529 aaKnown RBP12.62□□□□□ -0.39
LINC00511-204ENST00000577828 RAB11FIP3O75154 756 aa12.61□□□□□ -0.39
LINC00511-204ENST00000577828 IL15P40933 162 aaPredicted RBP12.61□□□□□ -0.39
LINC00511-204ENST00000577828 RFX5P48382 616 aaPredicted RBP12.61□□□□□ -0.39
LINC00511-204ENST00000577828 PTPN12Q05209 780 aaKnown RBP12.61□□□□□ -0.39
LINC00511-204ENST00000577828 G3BP1Q13283 466 aaKnown RBP eCLIP12.61□□□□□ -0.39
LINC00511-204ENST00000577828 OS9Q13438 667 aaPredicted RBP12.61□□□□□ -0.39
LINC00511-204ENST00000577828 CENPQQ7L2Z9 268 aaPredicted RBP12.61□□□□□ -0.39
LINC00511-204ENST00000577828 EYA2O00167 538 aa12.6□□□□□ -0.39
LINC00511-204ENST00000577828 SURF6O75683 361 aaKnown RBP12.6□□□□□ -0.39
LINC00511-204ENST00000577828 YBX3P16989 372 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC00511-204ENST00000577828 RPS8P62241 208 aaKnown RBP12.6□□□□□ -0.39
LINC00511-204ENST00000577828 LDHAL6AQ6ZMR3 332 aa12.6□□□□□ -0.39
LINC00511-204ENST00000577828 DCTPP1Q9H773 170 aa12.6□□□□□ -0.39
LINC00511-204ENST00000577828 CNNM1Q9NRU3 951 aa12.6□□□□□ -0.39
LINC00511-204ENST00000577828 BSDC1Q9NW68 430 aaPredicted RBP12.6□□□□□ -0.39
LINC00511-204ENST00000577828 ZBTB47Q9UFB7 747 aaPredicted RBP12.6□□□□□ -0.39
LINC00511-204ENST00000577828 MROH5Q6ZUA9 1318 aa12.6□□□□□ -0.39
LINC00511-204ENST00000577828 COL11A2P13942 1736 aaPredicted RBP12.59□□□□□ -0.39
LINC00511-204ENST00000577828 DLEC1Q9Y238 1755 aa12.59□□□□□ -0.39
LINC00511-204ENST00000577828 PPEF1O14829 653 aaPredicted RBP12.59□□□□□ -0.39
LINC00511-204ENST00000577828 GRIPAP1Q4V328 841 aa12.59□□□□□ -0.39
LINC00511-204ENST00000577828 ZNF622Q969S3 477 aaKnown RBP eCLIP12.59□□□□□ -0.39
LINC00511-204ENST00000577828 SEC31BQ9NQW1 1179 aa12.59□□□□□ -0.39
LINC00511-204ENST00000577828 GTF3C3Q9Y5Q9 886 aa12.59□□□□□ -0.39
LINC00511-204ENST00000577828 SOGA3Q5TF21 947 aa12.58□□□□□ -0.4
LINC00511-204ENST00000577828 CC2D2BQ6DHV5 1058 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms