RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 ALKBH8Q96BT7 664 aaKnown RBP4.35□□□□□ -1.71
COPS3-213ENST00000577210 HSH2DQ96JZ2 352 aa4.35□□□□□ -1.71
COPS3-213ENST00000577210 BCS1LQ9Y276 419 aa4.35□□□□□ -1.71
COPS3-213ENST00000577210 RTCBQ9Y3I0 505 aaKnown RBP4.35□□□□□ -1.71
COPS3-213ENST00000577210 SHISA8B8ZZ34 492 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 UBAP1LF5GYI3 381 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 OIP5O43482 229 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 PDGFAP04085 211 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 MAPTP10636 758 aaKnown RBP4.34□□□□□ -1.71
COPS3-213ENST00000577210 FGFR3P22607 806 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 SCNN1AP37088 669 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 SNRPNP63162 240 aaKnown RBP4.34□□□□□ -1.71
COPS3-213ENST00000577210 ATP2B2Q01814 1243 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 PLCB3Q01970 1234 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 MTMR3Q13615 1198 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 CCINQ13939 588 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 ZNF326Q5BKZ1 582 aaKnown RBP4.34□□□□□ -1.71
COPS3-213ENST00000577210 ZNF438Q7Z4V0 828 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 NLRP13Q86W25 1043 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 GJD3Q8N144 294 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 CMTR1Q8N1G2 835 aaKnown RBP4.34□□□□□ -1.71
COPS3-213ENST00000577210 ZNF280CQ8ND82 737 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 GPR152Q8TDT2 470 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 NUDT16Q96DE0 195 aaKnown RBP4.34□□□□□ -1.71
COPS3-213ENST00000577210 ABHD17AQ96GS6 310 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 DCAF5Q96JK2 942 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 OXCT2Q9BYC2 517 aaPredicted RBP4.34□□□□□ -1.71
COPS3-213ENST00000577210 DNAJC25Q9H1X3 360 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 ENAMQ9NRM1 1142 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 PRR12Q9ULL5 1215 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 POLIQ9UNA4 740 aa4.34□□□□□ -1.71
COPS3-213ENST00000577210 C2CD2LO14523 706 aa4.33□□□□□ -1.72
COPS3-213ENST00000577210 OPLAHO14841 1288 aa4.33□□□□□ -1.72
COPS3-213ENST00000577210 FZD6O60353 706 aa4.33□□□□□ -1.72
COPS3-213ENST00000577210 XYLBO75191 536 aa4.33□□□□□ -1.72
COPS3-213ENST00000577210 BMP4P12644 408 aa4.33□□□□□ -1.72
COPS3-213ENST00000577210 PLA2G4EQ3MJ16 856 aa4.33□□□□□ -1.72
COPS3-213ENST00000577210 C8orf34Q49A92 452 aa4.33□□□□□ -1.72
COPS3-213ENST00000577210 TTC39BQ5VTQ0 682 aaPredicted RBP4.33□□□□□ -1.72
COPS3-213ENST00000577210 KLRG1Q96E93 195 aa4.33□□□□□ -1.72
COPS3-213ENST00000577210 FRMD6Q96NE9 622 aa4.33□□□□□ -1.72
COPS3-213ENST00000577210 FAM129BQ96TA1 746 aa4.33□□□□□ -1.72
COPS3-213ENST00000577210 NDFIP2Q9NV92 336 aa4.33□□□□□ -1.72
COPS3-213ENST00000577210 HCN2Q9UL51 889 aa4.33□□□□□ -1.72
COPS3-213ENST00000577210 DCDC2BA2VCK2 349 aa4.32□□□□□ -1.72
COPS3-213ENST00000577210 PHF20L1A8MW92 1017 aa4.32□□□□□ -1.72
COPS3-213ENST00000577210 ZBTB39O15060 712 aa4.32□□□□□ -1.72
COPS3-213ENST00000577210 BNIP3LO60238 219 aa4.32□□□□□ -1.72
COPS3-213ENST00000577210 MAP3K6O95382 1288 aa4.32□□□□□ -1.72
COPS3-213ENST00000577210 PSAPP07602 524 aa4.32□□□□□ -1.72
COPS3-213ENST00000577210 SOX18P35713 384 aa4.32□□□□□ -1.72
COPS3-213ENST00000577210 SPEM2Q0P670 501 aa4.32□□□□□ -1.72
COPS3-213ENST00000577210 ECM1Q16610 540 aa4.32□□□□□ -1.72
COPS3-213ENST00000577210 ALG1LQ6GMV1 187 aa4.32□□□□□ -1.72
COPS3-213ENST00000577210 PODNQ7Z5L7 613 aa4.32□□□□□ -1.72
COPS3-213ENST00000577210 SNX29Q8TEQ0 813 aa4.32□□□□□ -1.72
COPS3-213ENST00000577210 FBF1Q8TES7 1133 aa4.32□□□□□ -1.72
COPS3-213ENST00000577210 RBSNQ9H1K0 784 aa4.32□□□□□ -1.72
COPS3-213ENST00000577210 ABI2Q9NYB9 513 aaPredicted RBP4.32□□□□□ -1.72
COPS3-213ENST00000577210 GDF2Q9UK05 429 aaPredicted RBP4.32□□□□□ -1.72
COPS3-213ENST00000577210 ANKRD33BA6NCL7 494 aa4.31□□□□□ -1.72
COPS3-213ENST00000577210 TREHO43280 583 aa4.31□□□□□ -1.72
COPS3-213ENST00000577210 PROCP04070 461 aa4.31□□□□□ -1.72
COPS3-213ENST00000577210 RARAP10276 462 aa4.31□□□□□ -1.72
COPS3-213ENST00000577210 ARAFP10398 606 aa4.31□□□□□ -1.72
COPS3-213ENST00000577210 ADH6P28332 368 aa4.31□□□□□ -1.72
COPS3-213ENST00000577210 CTBSQ01459 385 aa4.31□□□□□ -1.72
COPS3-213ENST00000577210 EAPPQ56P03 285 aaPredicted RBP4.31□□□□□ -1.72
COPS3-213ENST00000577210 TMC7Q7Z402 723 aa4.31□□□□□ -1.72
COPS3-213ENST00000577210 ATCAYQ86WG3 371 aa4.31□□□□□ -1.72
COPS3-213ENST00000577210 GOLGA6L1Q8N7Z2 621 aa4.31□□□□□ -1.72
COPS3-213ENST00000577210 GSX2Q9BZM3 304 aa4.31□□□□□ -1.72
COPS3-213ENST00000577210 ELP3Q9H9T3 547 aa4.31□□□□□ -1.72
COPS3-213ENST00000577210 LRRC4BQ9NT99 713 aa4.31□□□□□ -1.72
COPS3-213ENST00000577210 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.31□□□□□ -1.72
COPS3-213ENST00000577210 GIPC1O14908 333 aa4.3□□□□□ -1.72
COPS3-213ENST00000577210 EIF4EBP3O60516 100 aaPredicted RBP4.3□□□□□ -1.72
COPS3-213ENST00000577210 CPNE3O75131 537 aaKnown RBP4.3□□□□□ -1.72
COPS3-213ENST00000577210 PHACTR2O75167 634 aa4.3□□□□□ -1.72
COPS3-213ENST00000577210 SIN3BO75182 1162 aa4.3□□□□□ -1.72
COPS3-213ENST00000577210 EDN3P14138 238 aa4.3□□□□□ -1.72
COPS3-213ENST00000577210 HOXB4P17483 251 aaPredicted RBP4.3□□□□□ -1.72
COPS3-213ENST00000577210 ALAS2P22557 587 aa4.3□□□□□ -1.72
COPS3-213ENST00000577210 PLAURQ03405 335 aa4.3□□□□□ -1.72
COPS3-213ENST00000577210 ZNF468Q5VIY5 522 aaPredicted RBP4.3□□□□□ -1.72
COPS3-213ENST00000577210 DNAJC14Q6Y2X3 702 aaPredicted RBP4.3□□□□□ -1.72
COPS3-213ENST00000577210 CACTIN-AS1Q8N1I8 211 aa4.3□□□□□ -1.72
COPS3-213ENST00000577210 BEND7Q8N7W2 519 aaPredicted RBP4.3□□□□□ -1.72
COPS3-213ENST00000577210 GALNT6Q8NCL4 622 aa4.3□□□□□ -1.72
COPS3-213ENST00000577210 SPACA7Q96KW9 195 aa4.3□□□□□ -1.72
COPS3-213ENST00000577210 SPOCK3Q9BQ16 436 aa4.3□□□□□ -1.72
COPS3-213ENST00000577210 CCDC87Q9NVE4 849 aa4.3□□□□□ -1.72
COPS3-213ENST00000577210 PPP4R2Q9NY27 417 aa4.3□□□□□ -1.72
COPS3-213ENST00000577210 GGA1Q9UJY5 639 aa4.3□□□□□ -1.72
COPS3-213ENST00000577210 KCNMB2Q9Y691 235 aa4.3□□□□□ -1.72
COPS3-213ENST00000577210 KRBA1A5PL33 1030 aa4.29□□□□□ -1.72
COPS3-213ENST00000577210 FAM177BA6PVY3 158 aa4.29□□□□□ -1.72
COPS3-213ENST00000577210 TNFRSF21O75509 655 aa4.29□□□□□ -1.72
COPS3-213ENST00000577210 HOXD8P13378 290 aaPredicted RBP4.29□□□□□ -1.72
COPS3-213ENST00000577210 CD33P20138 364 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms